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KJC3_011408-T1, KJC3_011408-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011408-T1
Unique NameKJC3_011408-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:543100..545166-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011408-T1 ID=KJC3_011408-T1|Name=KJC3_011408-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2067bp|location=Sequence derived from alignment at ch8:543100..545166- (Aspergillus niger KJC3)
CGACAATCAGCCTTCTGGAAGTGTTGGCACCTTGAACACGCTGGTTTTTA
TTTTTCCCTGCTTCTTCTTTCTTCCCCCCTTTTCTTCCCCTTCAACCTGT
TTCATTCCCCGTACGCCGTCCACGTATCCACGAACATCATGTTCGCGTCG
AGTATCCGATCGAGAGCTCTGGGATTGAGCCCACGAGCCCGGTTTGAGAA
TACGTACGAGAGAATCTTCCCTTCCAATGCTTCTCTTTCCCTCCTCAAAA
TTCGACAGATGCTGATAACCATTGTTACTAGTCGTCTTCCATCTTCCACT
AGCGGGCGCCGTTATAGATCCGATGAGCCCCTCAACCGAATTTCCTCGAA
AATCACACAACCCAAATCCCAGGGTGCTTCGCAAGCAATGCTCTACGCCA
CCGGCCTAACAGAGGAAGACATGTCCAAGCCACAGGTCGGTATCTCCTCG
GTGTGGTTCGAGGGTAACCCATGCAACATGCACTTGCATGACCTGTCTGC
CATTGTGCGCGATTCCGTGCTCCGTGCGGGTCTGGTCCCTATGCGATTCA
ACTCAGTTGGAGTGTCGGATGGGATCAGTATGGGTACAAAGGGAATGAGA
TACAGCCTGCAGAGCCGGGAGCTGATCGCTGATGGTATTGAGACGGTGAT
GAATGCCCAGTGGTACGATGCGAATGTGTCGCTCCCGGGTTGTGATAAGA
ATATGCCAGGTGTATTAATAGCGATGGGACGCACGAACCGACCTAGCATC
ATGGTCTACGGTGGCAGTATCAAGCCTGGATGCAGTGCAAAGGGCCAGAA
ATTGGACCTGGTCAGTGCATTCCAGTCATATGGCCAGTTCATCACCGGCC
AGATCGACGAGAAGGAGCGGTTCGATATCATTCGCAATGCATGCCCCGGC
AGAGGTGCATGCGGTGGCATGTACACGGCTAATACGCTGGCCACGGCTAT
TGAGACTATGGGAATGACTATTCCTGGTAGTAGTAGTTGCCCGGCAGATG
ATCGCAAGAAGCTAGTTGAGTGCGAAAATATTGGCGAGGTGGTTAAAAAT
ATGCTCAGGGAAGATATCAAACCCAGGGATATCTTAACACGTCAAGCCTT
CGAGAATGCAATGATTGTAGTGAACGTGCTGGGTGGCAGTACTAATGCTG
TTTTACATCTGATTGCCATTGCTGACTCTGTCGGTATCAAGTTGACTATT
GATGACTTCCAGGCAGTATCTGATAAGACACCGTTCCTGGCTGATTTGAA
GCCATCTGGAAAGTATCTTATGAATGATCTTTATAATATCGGTGGCACAC
CAGCCCTCCTGAAATATCTCCTGAAGGAGGGCTTGATCGATGGCTCAGGA
GTTACTGTTACCGGTAAAACAATGAAGGAAAATGTAGCCTCATGGCCTGA
TTTTCCTGCTGACCAGGATATCATCCGCCCCCTCAACAACCCTATCAAAC
CATCTGGCCATCTCCAGATTCTTCGCGGATCGCTGGCCCCGGGCGGTTCC
GTGGGTAAGATTACTGGAAAGGAGGGTCTGCGGTTTGAGGGTATAGCTAA
ATGCTATGATTACGAAGATGCATTCATTGAGTCCCTTGAGCGGGGTGAGA
TCAAGAAGGGCGAGAAAACAGTCGTGATTATCCGGTATGAAGGCCCCAAG
GGTGGCCCAGGAATGCCTGAGATGCTCAAGCCCAGCGCGGCCATTATGGG
CGCTGGACTTGGCCAGGACGTTGCTCTTCTTACAGATGGAAGATTCTCGG
GTGGCAGTCACGGATTTTTGATCGGACATATCGTGCCGGAAGCCATGGAA
GGCGGCCCGATCGCGTTGGCTCGAGACGGTGATCGGATCGTGATTGATGC
TGAGGAAAGAGTGGTCGATCTGGATATCTCTACTGAGGAGCTCGAGAAGA
GGAGGAAGGAGTGGAACGCACCCCCGCTCCGGTACCAGAAGGGAACTCTG
AAGAAATATTGCACGCTGGTCAGCGACGCCAGCCATGGTTGTGTCACGGA
CGGACCGATATAGGTATCCAGTCCAAATGTACGAAGAGAGCAGTTAGATG
AAAAATAAAAGTCCAAG
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Coding sequence (CDS) from alignment at ch8:543100..545166-

>KJC3_011408-T1 ID=KJC3_011408-T1|Name=KJC3_011408-T1|organism=Aspergillus niger KJC3|type=CDS|length=3594bp|location=Sequence derived from alignment at ch8:543100..545166- (Aspergillus niger KJC3)
TCGTCTTCCATCTTCCACTAGCGGGCGCCGTTATAGATCCGATGAGCCCC
TCAACCGAATTTCCTCGAAAATCACACAACCCAAATCCCAGGGTGCTTCG
CAAGCAATGCTCTACGCCACCGGCCTAACAGAGGAAGACATGTCCAAGCC
ACAGGTCGGTATCTCCTCGGTGTGGTTCGAGGGTAACCCATGCAACATGC
ACTTGCATGACCTGTCTGCCATTGTGCGCGATTCCGTGCTCCGTGCGGGT
CTGGTCCCTATGCGATTCAACTCAGTTGGAGTGTCGGATGGGATCAGTAT
GGGTACAAAGGGAATGAGATACAGCCTGCAGAGCCGGGAGCTGATCGCTG
ATGGTATTGAGACGGTGATGAATGCCCAGTGGTACGATGCGAATGTGTCG
CTCCCGGGTTGTGATAAGAATATGCCAGGTGTATTAATAGCGATGGGACG
CACGAACCGACCTAGCATCATGGTCTACGGTGGCAGTATCAAGCCTGGAT
GCAGTGCAAAGGGCCAGAAATTGGACCTGGTCAGTGCATTCCAGTCATAT
GGCCAGTTCATCACCGGCCAGATCGACGAGAAGGAGCGGTTCGATATCAT
TCGCAATGCATGCCCCGGCAGAGGTGCATGCGGTGGCATGTACACGGCTA
ATACGCTGGCCACGGCTATTGAGACTATGGGAATGACTATTCCTGGTAGT
AGTAGTTGCCCGGCAGATGATCGCAAGAAGCTAGTTGAGTGCGAAAATAT
TGGCGAGGTGGTTAAAAATATGCTCAGGGAAGATATCAAACCCAGGGATA
TCTTAACACGTCAAGCCTTCGAGAATGCAATGATTGTAGTGAACGTGCTG
GGTGGCAGTACTAATGCTGTTTTACATCTGATTGCCATTGCTGACTCTGT
CGGTATCAAGTTGACTATTGATGACTTCCAGGCAGTATCTGATAAGACAC
CGTTCCTGGCTGATTTGAAGCCATCTGGAAAGTATCTTATGAATGATCTT
TATAATATCGGTGGCACACCAGCCCTCCTGAAATATCTCCTGAAGGAGGG
CTTGATCGATGGCTCAGGAGTTACTGTTACCGGTAAAACAATGAAGGAAA
ATGTAGCCTCATGGCCTGATTTTCCTGCTGACCAGGATATCATCCGCCCC
CTCAACAACCCTATCAAACCATCTGGCCATCTCCAGATTCTTCGCGGATC
GCTGGCCCCGGGCGGTTCCGTGGGTAAGATTACTGGAAAGGAGGGTCTGC
GGTTTGAGGGTATAGCTAAATGCTATGATTACGAAGATGCATTCATTGAG
TCCCTTGAGCGGGGTGAGATCAAGAAGGGCGAGAAAACAGTCGTGATTAT
CCGGTATGAAGGCCCCAAGGGTGGCCCAGGAATGCCTGAGATGCTCAAGC
CCAGCGCGGCCATTATGGGCGCTGGACTTGGCCAGGACGTTGCTCTTCTT
ACAGATGGAAGATTCTCGGGTGGCAGTCACGGATTTTTGATCGGACATAT
CGTGCCGGAAGCCATGGAAGGCGGCCCGATCGCGTTGGCTCGAGACGGTG
ATCGGATCGTGATTGATGCTGAGGAAAGAGTGGTCGATCTGGATATCTCT
ACTGAGGAGCTCGAGAAGAGGAGGAAGGAGTGGAACGCACCCCCGCTCCG
GTACCAGAAGGGAACTCTGAAGAAATATTGCACGCTGGTCAGCGACGCCA
GCCATGGTTGTGTCACGGACGGACCGATATAGATGTTCGCGTCGAGTATC
CGATCGAGAGCTCTGGGATTGAGCCCACGAGCCCGGTTTGAGAATACTCG
TCTTCCATCTTCCACTAGCGGGCGCCGTTATAGATCCGATGAGCCCCTCA
ACCGAATTTCCTCGAAAATCACACAACCCAAATCCCAGGGTGCTTCGCAA
GCAATGCTCTACGCCACCGGCCTAACAGAGGAAGACATGTCCAAGCCACA
GGTCGGTATCTCCTCGGTGTGGTTCGAGGGTAACCCATGCAACATGCACT
TGCATGACCTGTCTGCCATTGTGCGCGATTCCGTGCTCCGTGCGGGTCTG
GTCCCTATGCGATTCAACTCAGTTGGAGTGTCGGATGGGATCAGTATGGG
TACAAAGGGAATGAGATACAGCCTGCAGAGCCGGGAGCTGATCGCTGATG
GTATTGAGACGGTGATGAATGCCCAGTGGTACGATGCGAATGTGTCGCTC
CCGGGTTGTGATAAGAATATGCCAGGTGTATTAATAGCGATGGGACGCAC
GAACCGACCTAGCATCATGGTCTACGGTGGCAGTATCAAGCCTGGATGCA
GTGCAAAGGGCCAGAAATTGGACCTGGTCAGTGCATTCCAGTCATATGGC
CAGTTCATCACCGGCCAGATCGACGAGAAGGAGCGGTTCGATATCATTCG
CAATGCATGCCCCGGCAGAGGTGCATGCGGTGGCATGTACACGGCTAATA
CGCTGGCCACGGCTATTGAGACTATGGGAATGACTATTCCTGGTAGTAGT
AGTTGCCCGGCAGATGATCGCAAGAAGCTAGTTGAGTGCGAAAATATTGG
CGAGGTGGTTAAAAATATGCTCAGGGAAGATATCAAACCCAGGGATATCT
TAACACGTCAAGCCTTCGAGAATGCAATGATTGTAGTGAACGTGCTGGGT
GGCAGTACTAATGCTGTTTTACATCTGATTGCCATTGCTGACTCTGTCGG
TATCAAGTTGACTATTGATGACTTCCAGGCAGTATCTGATAAGACACCGT
TCCTGGCTGATTTGAAGCCATCTGGAAAGTATCTTATGAATGATCTTTAT
AATATCGGTGGCACACCAGCCCTCCTGAAATATCTCCTGAAGGAGGGCTT
GATCGATGGCTCAGGAGTTACTGTTACCGGTAAAACAATGAAGGAAAATG
TAGCCTCATGGCCTGATTTTCCTGCTGACCAGGATATCATCCGCCCCCTC
AACAACCCTATCAAACCATCTGGCCATCTCCAGATTCTTCGCGGATCGCT
GGCCCCGGGCGGTTCCGTGGGTAAGATTACTGGAAAGGAGGGTCTGCGGT
TTGAGGGTATAGCTAAATGCTATGATTACGAAGATGCATTCATTGAGTCC
CTTGAGCGGGGTGAGATCAAGAAGGGCGAGAAAACAGTCGTGATTATCCG
GTATGAAGGCCCCAAGGGTGGCCCAGGAATGCCTGAGATGCTCAAGCCCA
GCGCGGCCATTATGGGCGCTGGACTTGGCCAGGACGTTGCTCTTCTTACA
GATGGAAGATTCTCGGGTGGCAGTCACGGATTTTTGATCGGACATATCGT
GCCGGAAGCCATGGAAGGCGGCCCGATCGCGTTGGCTCGAGACGGTGATC
GGATCGTGATTGATGCTGAGGAAAGAGTGGTCGATCTGGATATCTCTACT
GAGGAGCTCGAGAAGAGGAGGAAGGAGTGGAACGCACCCCCGCTCCGGTA
CCAGAAGGGAACTCTGAAGAAATATTGCACGCTGGTCAGCGACGCCAGCC
ATGGTTGTGTCACGGACGGACCGATATAGATGTTCGCGTCGAGTATCCGA
TCGAGAGCTCTGGGATTGAGCCCACGAGCCCGGTTTGAGAATAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009082branched-chain amino acid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004160dihydroxy-acid dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011408KJC3_011408Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011408-T1KJC3_011408-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011408-T1.cdsKJC3_011408-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011408-T1.utr3p1KJC3_011408-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011408-T1.exon2KJC3_011408-T1.exon2Aspergillus niger KJC3exon
KJC3_011408-T1.exon1KJC3_011408-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011408-T1.utr5p1KJC3_011408-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR037237
DBxrefInterPro:IPR020558
DBxrefInterPro:IPR000581
DBxrefInterPro:IPR004404
DBxrefInterPro:IPR042096
DBxrefPFAM:PF00920
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:543100..545166 -
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