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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:545465..548163- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011409-T1 ID=KJC3_011409-T1|Name=KJC3_011409-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2699bp|location=Sequence derived from alignment at ch8:545465..548163- (Aspergillus niger KJC3)
CAACTTGAGACCCTGCCTCTGCCGCAGTGCAGCCTCTGTGTAATGAGTCA
ACCGCCTTCACCCAAGAAGCTATGCACAAAATGCAGTCAGCTCGAACTAA
GAAGAATGCTTGCGAATGAGGTCAAAGAGCGATCAATGGGCTCAATCACC
CACTACCGCAGCCCAACATGCCCATTCTGTGACCTTATTGCTAGCGCAAA
AAAGCTCGCCTCAGCTGATGGATGGGACCTGACCACCACCAAACCATCCC
CTCGCCTCTTCATCCAGAGCCGGAGTCCGATGTCTGTGAAAATTAATGAA
TACACGGAATACCCTAGTCCGCGATTACTGCTTGCAGTCGACCATAAGAC
GGATCATCAGCAGAATCGCCGGCCACTTCGCGAGATTGATCGGGTGAAGC
GCAACAGGTACATTCTGGCCGAGATTGAACAAGTACCCAGCAGCCCCCTG
AATGATAGCAAGAGGGAGTTCATCCGAAGACGGAGTATTCTACCCCAATT
AAATATTCCTCTGATACAAGACTGGCTGTTACGATGCAGAACACACAAGC
ACTCGGCCAGAACACCCAAGATCGGCACTGGACCATTTGATGGCCACCCT
TTCCGGTTGATCGATGTGACACGAGAATGCGTGACACTTCAGATGGAGAG
GTGTGATTATGTGGCATTATCCTATGTCTGGGGTAACTCCCCCACCATCC
TGGATCCTGGCCACGAAAATGGAAGCCAGATTCTAGTCGCCACTCAACAT
AACTTGTCACTGCTGTGTCGTCCACATGCCCTTTCGGAATCAGGCCGTAA
GCTGGGGAAGATTCCTCGTACAGTTTCCGACGCCATGGAGCTAGCTCGCA
AGATTGGTATTCGATATTTCTGGGTAGATACGCTGTGCATTGTGCAGGAT
GATGAGCAAGACAAGTCGCGGCTAATCAGCCACATGAACGACATCTATGA
TAATGCAACCATCACGATCATGGCCTCAGCGGGTGATAGTCCAGATGCAG
GTTTGCCAGGCATCAGTCCACGGGCAGGTTTTCCGATTGAGTCATACAGT
ATACCGGACGAAACAAATGGGCAGGTCCTGGCCTTGTCCCTTTCTCTGCC
ATCTTTGTGTCATGAAGTGCGGAAGGGTATGTGGAACACTCGTGGATGGA
CATTCCAGGAACAAAGTCTGTCACAGCGCTGCCTGTACTTGACAATGAAC
GAGACCTTTTTCCAGTGTCCAGAGGCTCAATGGAGAGAGGGGTATGACTA
CGAGGACGGAAGCGCATCAGAAGCACGAATTCAGATTCGCACTGGGCCTC
CATGGTGGAGTAATAGGCTCAGGAAAGATCCGGACCCTACCCCTTATCAT
TACCTTGGCGATCCACACAATGGATTGGACGCTGAAAGCTACCAACAAGC
TGTTCAAGAGTATAGCCGAAGACACCTGAGACATCCTGAAGACATACTCA
ATGCCTTTGAGGGGATCTTCAACCGGTTCCAGCAGATGCAGGAGGGTTCC
GGTGACCTAAATATTCGCCAAGCTCAAGGCATCCCGCCCCATCTCACGGC
GCAGGCATTACTGTGGTTTCCATCCGACACATGCCAGCAACGCGACTCAG
CGGAGAGATTCTCCACCTGGTCCTGGTAGGCAGATATCCTTATATAGATG
GTTGTGGCTAACAAGTGGCAGGGCCTCATGGATTGGTCCTATAGAATTCA
TTTTCGCGGAAAGCCTTTGGTTGTCGAGGAGCATCTCGCACGCTCCTCGA
AAAAATTACCCCTTGCACACAGCAGTTGTCCAATGGCACTTTGGTGGTGC
GAGCAGTAGCGTCTGGTCGCACCGTCTGTGGCAGGCTGCAGAGAATGTCC
GAAACCACAAAGAAAAGCACAAGCTCAATGAATATCGGACCACGCGAAAG
TTTCTCAACGACGTCGTCGGAATTCAAGTAAAAAGACTTCTAGACAAATC
TCTTAATTCAGTTCTGGCCAGTCTTGGGTGTGGCCAACTGGGCTTTATTG
GTGCATACTTGGGCTCTAGTGACTTTGACATCGCTGACGCCGTCACGGAG
CGGACTCAGCCCTTAGTCGTGTCTGGAGTTCATGCAGGGCAGTTCAAATA
TGATGGCAACACTGTCGTACCGGTGACCGAGCTGGTGATTATCTTGTGTA
CGAACACTATCATGGGTTCGCCGCGAACAGTCATGGTATTCTTAGGTATG
GCCACACAGGATGGAGTCTCTGTCCGTGTGGGAGTGGGATATACGTACCT
TTCCAAGGATACAGGGGCGCCCAAACCACGCTGGGATTATAGATTCTTTG
TCGTGAATTAAGTGTGTCCTAGTAAAATATAGCAAACAATTAATCTGGTA
TTTCCGTCATAAAGCTGAATATATAGTCGGTAATCAATGGGTGTAATCAA
CTGGATGTTTCCCTGGAACTTATATCCGGGCGCAGCTCTCCTTCGACATA
TGTATCGAGATACAGACCTCAATCGAAAGTTGAAACGCAGTTTGTGATGA
GGTCCGTCTGTATCAAAATAATCGGGTCGACAGGGTACGAGAATCACATT
GCCTTTAAGGCACGTAAGCCTCCTCCATCGGTATCTCTCCTATTATAAGT
AAGGAGGAACGTATAGGGTTATGTTGAGTCACCCCTGCTGCTTGGTGGCC
ATGATATATCGTTTTGTATACCATCTTGGTCTACTTGGCAGAACCCTGT back to topCoding sequence (CDS) from alignment at ch8:545465..548163- >KJC3_011409-T1 ID=KJC3_011409-T1|Name=KJC3_011409-T1|organism=Aspergillus niger KJC3|type=CDS|length=4446bp|location=Sequence derived from alignment at ch8:545465..548163- (Aspergillus niger KJC3)
GGCCTCATGGATTGGTCCTATAGAATTCATTTTCGCGGAAAGCCTTTGGT
TGTCGAGGAGCATCTCGCACGCTCCTCGAAAAAATTACCCCTTGCACACA
GCAGTTGTCCAATGGCACTTTGGTGGTGCGAGCAGTAGCGTCTGGTCGCA
CCGTCTGTGGCAGGCTGCAGAGAATGTCCGAAACCACAAAGAAAAGCACA
AGCTCAATGAATATCGGACCACGCGAAAGTTTCTCAACGACGTCGTCGGA
ATTCAAGTAAAAAGACTTCTAGACAAATCTCTTAATTCAGTTCTGGCCAG
TCTTGGGTGTGGCCAACTGGGCTTTATTGGTGCATACTTGGGCTCTAGTG
ACTTTGACATCGCTGACGCCGTCACGGAGCGGACTCAGCCCTTAGTCGTG
TCTGGAGTTCATGCAGGGCAGTTCAAATATGATGGCAACACTGTCGTACC
GGTGACCGAGCTGGTGATTATCTTGTGTACGAACACTATCATGGGTTCGC
CGCGAACAGTCATGGTATTCTTAGGTATGGCCACACAGGATGGAGTCTCT
GTCCGTGTGGGAGTGGGATATACGTACCTTTCCAAGGATACAGGGGCGCC
CAAACCACGCTGGGATTATAGATTCTTTGTCGTGAATTAAATGAGTCAAC
CGCCTTCACCCAAGAAGCTATGCACAAAATGCAGTCAGCTCGAACTAAGA
AGAATGCTTGCGAATGAGGTCAAAGAGCGATCAATGGGCTCAATCACCCA
CTACCGCAGCCCAACATGCCCATTCTGTGACCTTATTGCTAGCGCAAAAA
AGCTCGCCTCAGCTGATGGATGGGACCTGACCACCACCAAACCATCCCCT
CGCCTCTTCATCCAGAGCCGGAGTCCGATGTCTGTGAAAATTAATGAATA
CACGGAATACCCTAGTCCGCGATTACTGCTTGCAGTCGACCATAAGACGG
ATCATCAGCAGAATCGCCGGCCACTTCGCGAGATTGATCGGGTGAAGCGC
AACAGGTACATTCTGGCCGAGATTGAACAAGTACCCAGCAGCCCCCTGAA
TGATAGCAAGAGGGAGTTCATCCGAAGACGGAGTATTCTACCCCAATTAA
ATATTCCTCTGATACAAGACTGGCTGTTACGATGCAGAACACACAAGCAC
TCGGCCAGAACACCCAAGATCGGCACTGGACCATTTGATGGCCACCCTTT
CCGGTTGATCGATGTGACACGAGAATGCGTGACACTTCAGATGGAGAGGT
GTGATTATGTGGCATTATCCTATGTCTGGGGTAACTCCCCCACCATCCTG
GATCCTGGCCACGAAAATGGAAGCCAGATTCTAGTCGCCACTCAACATAA
CTTGTCACTGCTGTGTCGTCCACATGCCCTTTCGGAATCAGGCCGTAAGC
TGGGGAAGATTCCTCGTACAGTTTCCGACGCCATGGAGCTAGCTCGCAAG
ATTGGTATTCGATATTTCTGGGTAGATACGCTGTGCATTGTGCAGGATGA
TGAGCAAGACAAGTCGCGGCTAATCAGCCACATGAACGACATCTATGATA
ATGCAACCATCACGATCATGGCCTCAGCGGGTGATAGTCCAGATGCAGGT
TTGCCAGGCATCAGTCCACGGGCAGGTTTTCCGATTGAGTCATACAGTAT
ACCGGACGAAACAAATGGGCAGGTCCTGGCCTTGTCCCTTTCTCTGCCAT
CTTTGTGTCATGAAGTGCGGAAGGGTATGTGGAACACTCGTGGATGGACA
TTCCAGGAACAAAGTCTGTCACAGCGCTGCCTGTACTTGACAATGAACGA
GACCTTTTTCCAGTGTCCAGAGGCTCAATGGAGAGAGGGGTATGACTACG
AGGACGGAAGCGCATCAGAAGCACGAATTCAGATTCGCACTGGGCCTCCA
TGGTGGAGTAATAGGCTCAGGAAAGATCCGGACCCTACCCCTTATCATTA
CCTTGGCGATCCACACAATGGATTGGACGCTGAAAGCTACCAACAAGCTG
TTCAAGAGTATAGCCGAAGACACCTGAGACATCCTGAAGACATACTCAAT
GCCTTTGAGGGGATCTTCAACCGGTTCCAGCAGATGCAGGAGGGTTCCGG
TGACCTAAATATTCGCCAAGCTCAAGGCATCCCGCCCCATCTCACGGCGC
AGGCATTACTGTGGTTTCCATCCGACACATGCCAGCAACGCGACTCAGCG
GAGAGATTCTCCACCTGGTCCTGGGCCTCATGGATTGGTCCTATAGAATT
CATTTTCGCGGAAAGCCTTTGGTTGTCGAGGAGCATCTCGCACGCTCCTC
GAAAAAATTACCCCTTGCACACAGCAGTTGTCCAATGGCACTTTGGTGGT
GCGAGCAGTAGCGTCTGGTCGCACCGTCTGTGGCAGGCTGCAGAGAATGT
CCGAAACCACAAAGAAAAGCACAAGCTCAATGAATATCGGACCACGCGAA
AGTTTCTCAACGACGTCGTCGGAATTCAAGTAAAAAGACTTCTAGACAAA
TCTCTTAATTCAGTTCTGGCCAGTCTTGGGTGTGGCCAACTGGGCTTTAT
TGGTGCATACTTGGGCTCTAGTGACTTTGACATCGCTGACGCCGTCACGG
AGCGGACTCAGCCCTTAGTCGTGTCTGGAGTTCATGCAGGGCAGTTCAAA
TATGATGGCAACACTGTCGTACCGGTGACCGAGCTGGTGATTATCTTGTG
TACGAACACTATCATGGGTTCGCCGCGAACAGTCATGGTATTCTTAGGTA
TGGCCACACAGGATGGAGTCTCTGTCCGTGTGGGAGTGGGATATACGTAC
CTTTCCAAGGATACAGGGGCGCCCAAACCACGCTGGGATTATAGATTCTT
TGTCGTGAATTAAATGAGTCAACCGCCTTCACCCAAGAAGCTATGCACAA
AATGCAGTCAGCTCGAACTAAGAAGAATGCTTGCGAATGAGGTCAAAGAG
CGATCAATGGGCTCAATCACCCACTACCGCAGCCCAACATGCCCATTCTG
TGACCTTATTGCTAGCGCAAAAAAGCTCGCCTCAGCTGATGGATGGGACC
TGACCACCACCAAACCATCCCCTCGCCTCTTCATCCAGAGCCGGAGTCCG
ATGTCTGTGAAAATTAATGAATACACGGAATACCCTAGTCCGCGATTACT
GCTTGCAGTCGACCATAAGACGGATCATCAGCAGAATCGCCGGCCACTTC
GCGAGATTGATCGGGTGAAGCGCAACAGGTACATTCTGGCCGAGATTGAA
CAAGTACCCAGCAGCCCCCTGAATGATAGCAAGAGGGAGTTCATCCGAAG
ACGGAGTATTCTACCCCAATTAAATATTCCTCTGATACAAGACTGGCTGT
TACGATGCAGAACACACAAGCACTCGGCCAGAACACCCAAGATCGGCACT
GGACCATTTGATGGCCACCCTTTCCGGTTGATCGATGTGACACGAGAATG
CGTGACACTTCAGATGGAGAGGTGTGATTATGTGGCATTATCCTATGTCT
GGGGTAACTCCCCCACCATCCTGGATCCTGGCCACGAAAATGGAAGCCAG
ATTCTAGTCGCCACTCAACATAACTTGTCACTGCTGTGTCGTCCACATGC
CCTTTCGGAATCAGGCCGTAAGCTGGGGAAGATTCCTCGTACAGTTTCCG
ACGCCATGGAGCTAGCTCGCAAGATTGGTATTCGATATTTCTGGGTAGAT
ACGCTGTGCATTGTGCAGGATGATGAGCAAGACAAGTCGCGGCTAATCAG
CCACATGAACGACATCTATGATAATGCAACCATCACGATCATGGCCTCAG
CGGGTGATAGTCCAGATGCAGGTTTGCCAGGCATCAGTCCACGGGCAGGT
TTTCCGATTGAGTCATACAGTATACCGGACGAAACAAATGGGCAGGTCCT
GGCCTTGTCCCTTTCTCTGCCATCTTTGTGTCATGAAGTGCGGAAGGGTA
TGTGGAACACTCGTGGATGGACATTCCAGGAACAAAGTCTGTCACAGCGC
TGCCTGTACTTGACAATGAACGAGACCTTTTTCCAGTGTCCAGAGGCTCA
ATGGAGAGAGGGGTATGACTACGAGGACGGAAGCGCATCAGAAGCACGAA
TTCAGATTCGCACTGGGCCTCCATGGTGGAGTAATAGGCTCAGGAAAGAT
CCGGACCCTACCCCTTATCATTACCTTGGCGATCCACACAATGGATTGGA
CGCTGAAAGCTACCAACAAGCTGTTCAAGAGTATAGCCGAAGACACCTGA
GACATCCTGAAGACATACTCAATGCCTTTGAGGGGATCTTCAACCGGTTC
CAGCAGATGCAGGAGGGTTCCGGTGACCTAAATATTCGCCAAGCTCAAGG
CATCCCGCCCCATCTCACGGCGCAGGCATTACTGTGGTTTCCATCCGACA
CATGCCAGCAACGCGACTCAGCGGAGAGATTCTCCACCTGGTCCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011409-T1.utr3p1 | KJC3_011409-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011409-T1.utr5p1 | KJC3_011409-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:545465..548163 - |
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