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KJC3_011411-T1, KJC3_011411-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011411-T1
Unique NameKJC3_011411-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:552459..554204+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011411-T1 ID=KJC3_011411-T1|Name=KJC3_011411-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1746bp|location=Sequence derived from alignment at ch8:552459..554204+ (Aspergillus niger KJC3)
AGCCTGCATGTCTAGTAAGTTCGGACCCTGAAAAGTTACCTTCCTCTGCT
CTTGCTCGATAACTTCCTGTTGCTGGTCGGCTCCTTCCTACATGACTGCT
GGCAGTCTGCGAATTCTGCTTGCGATCCCTGAGATTTCATCGGCTGTTGT
CGTCAGACCATGTGGGGGTCATGTGCCGAGGCCTTCCCAGATATCTATCC
TTCACTGCTTCTCACCCAAGGGGTTCCCAACGTCATTCATCCTCAAGGTC
CATCGCATCGCAGGAGCCACCACCCATGACGACTTTCAGCCCTTCCGAGG
TCAGCTTTGTGAAGCAGCTCAAGAATTCACCAGTTTCTTGTATCTTTCGC
ACAGTATGGCATGGGAAAGATTGTATCTTGAAAGTGGTAGGTATCATGAA
GCAGCCGACCGAGTCTCTTTGCGATGACCATTGACCTTTCCATTACACGT
AGTATCACTCTCCACAGCCATTATCCGTCAAACATCGAAGTCGTCGTCGA
GATCGCGAGACCGATCCATTCAAGTGCGAAAGCGCGGCATTTATGCGTCT
ACGAGAACATGGCTTCTGTGACCGAGGACATGTCCCAGCCTTCTATGGTC
TGATCGAACACATCAACCCAGTTCATCATTTACCATATTTGCAAGACTTC
GTTGAGGATACCCTATATCCGAATGCTATTTTGATGGAGTATGTACCAGA
TATTCACCCAATTGATCTATCGAACTACTCCGAAAAACGACTTCATAAGC
TCCAGCAGATACTGTTAGAGATGCACCGTGCTGGTGTTTACCATGGGGAT
CTATATCCTCGCAACCTGATGGTACAGATAACATCCGATCGAGTATTATG
GATGGATTTCGATCGCGCGCAGACATTCACGCCCCAGTCGATTAAAGAGT
GTCACCTGACTTGGTTGGAACGTGAGACAAGAATGATGGAAGAATTTGTT
GAGGGTCTTGTCAGTCTCTGATACATTTCCCTTCTCTTTTCCCTGTGAGT
AACTAACCCAACGAGGTGCAGACAGCCGATGCTAAGCTCGGAAGGATTCA
TGAGACGTGGATCTGCTACTATGAGTATGTGTATCTGGTCAAGTCCTATC
AATATTTATAGCGGACTAATGTATCGTAACAGAGGCTTTAGACCCCCCAA
GGATGAAGGAAGGGAGGTATTGCTAAACGAGGAACAGGGGGGAATATAGT
AACTGCGTGAGCTAGATGTTAATGCCCGATACGGACTTGCCCATGATACA
TAACTGGGTAAGGATAGAAAATGAAAGCCTATGGGTCCGGAGTCAGCAAT
TTAATGCCAGGTTCCCTTGACGCACATACCCAGTGGGAAGGTTGAAGAGG
ATATCGGACTGACAAACTGCTGGAGGCGGCTTCAACGCAGAAGAATTAAT
GTGCTCGAATCAAATTATATCGCTTGGAGCAAAGCTAGCTACATTGCAGT
CCGCCCAGACCCGAGTCCGATATCCTATCTTAGGATAGATACAAGCCTCC
TGATCGTCTTACTTTCCCCACTTTTCCTATTTAATCAACCGGGATAGGTT
GGTAGGCCTGTTGGCCAACCAGGTGACATTTCTGGTCTTATTGATGTCGA
TGTCAAGATGAATAGGGAACTGCCAACGAAACATCCTCCCAGATGACTGT
TTGTCGTCCCTTTGCTGCATCAGATCATCAGGATGATTCTCTTGCATGGG
AGGGGATCTTCGTGGGAGACAAGGATGGTCTTGGAGTTAAGAATCC
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Coding sequence (CDS) from alignment at ch8:552459..554204+

>KJC3_011411-T1 ID=KJC3_011411-T1|Name=KJC3_011411-T1|organism=Aspergillus niger KJC3|type=CDS|length=3372bp|location=Sequence derived from alignment at ch8:552459..554204+ (Aspergillus niger KJC3)
ATGTGCCGAGGCCTTCCCAGATATCTATCCTTCACTGCTTCTCACCCAAG
GGGTTCCCAACGTCATTCATCCTCAAGGTCCATCGCATCGCAGGAGCCAC
CACCCATGACGACTTTCAGCCCTTCCGAGGTCAGCTTTGTGAAGCAGCTC
AAGAATTCACCAGTTTCTTGTATCTTTCGCACAGTATGGCATGGGAAAGA
TTGTATCTTGAAAGTGTATCACTCTCCACAGCCATTATCCGTCAAACATC
GAAGTCGTCGTCGAGATCGCGAGACCGATCCATTCAAGTGCGAAAGCGCG
GCATTTATGCGTCTACGAGAACATGGCTTCTGTGACCGAGGACATGTCCC
AGCCTTCTATGGTCTGATCGAACACATCAACCCAGTTCATCATTTACCAT
ATTTGCAAGACTTCGTTGAGGATACCCTATATCCGAATGCTATTTTGATG
GAGTATGTACCAGATATTCACCCAATTGATCTATCGAACTACTCCGAAAA
ACGACTTCATAAGCTCCAGCAGATACTGTTAGAGATGCACCGTGCTGGTG
TTTACCATGGGGATCTATATCCTCGCAACCTGATGGTACAGATAACATCC
GATCGAGTATTATGGATGGATTTCGATCGCGCGCAGACATTCACGCCCCA
GTCGATTAAAGAGTGTCACCTGACTTGGTTGGAACGTGAGACAAGAATGA
TGGAAGAATTTGTTGAGGGTCTTACAGCCGATGCTAAGCTCGGAAGGATT
CATGAGACGTGGATCTGCTACTATGAAGGCTTTAGACCCCCCAAGGATGA
AGGAAGGGAGGTATTGCTAAACGAGGAACAGGGGGGAATATAGATGTGCC
GAGGCCTTCCCAGATATCTATCCTTCACTGCTTCTCACCCAAGGGGTTCC
CAACGTCATTCATCCTCAAGGTCCATCGCATCGCAGGAGCCACCACCCAT
GACGACTTTCAGCCCTTCCGAGGTCAGCTTTGTGAAGCAGCTCAAGAATT
CACCAGTTTCTTGTATCTTTCGCACAGTATGGCATGGGAAAGATTGTATC
TTGAAAGTGTATCACTCTCCACAGCCATTATCCGTCAAACATCGAAGTCG
TCGTCGAGATCGCGAGACCGATCCATTCAAGTGCGAAAGCGCGGCATTTA
TGCGTCTACGAGAACATGGCTTCTGTGACCGAGGACATGTCCCAGCCTTC
TATGGTCTGATCGAACACATCAACCCAGTTCATCATTTACCATATTTGCA
AGACTTCGTTGAGGATACCCTATATCCGAATGCTATTTTGATGGAGTATG
TACCAGATATTCACCCAATTGATCTATCGAACTACTCCGAAAAACGACTT
CATAAGCTCCAGCAGATACTGTTAGAGATGCACCGTGCTGGTGTTTACCA
TGGGGATCTATATCCTCGCAACCTGATGGTACAGATAACATCCGATCGAG
TATTATGGATGGATTTCGATCGCGCGCAGACATTCACGCCCCAGTCGATT
AAAGAGTGTCACCTGACTTGGTTGGAACGTGAGACAAGAATGATGGAAGA
ATTTGTTGAGGGTCTTACAGCCGATGCTAAGCTCGGAAGGATTCATGAGA
CGTGGATCTGCTACTATGAAGGCTTTAGACCCCCCAAGGATGAAGGAAGG
GAGGTATTGCTAAACGAGGAACAGGGGGGAATATAGATGTGCCGAGGCCT
TCCCAGATATCTATCCTTCACTGCTTCTCACCCAAGGGGTTCCCAACGTC
ATTCATCCTCAAGGTCCATCGCATCGCAGGAGCCACCACCCATGACGACT
TTCAGCCCTTCCGAGGTCAGCTTTGTGAAGCAGCTCAAGAATTCACCAGT
TTCTTGTATCTTTCGCACAGTATGGCATGGGAAAGATTGTATCTTGAAAG
TGTATCACTCTCCACAGCCATTATCCGTCAAACATCGAAGTCGTCGTCGA
GATCGCGAGACCGATCCATTCAAGTGCGAAAGCGCGGCATTTATGCGTCT
ACGAGAACATGGCTTCTGTGACCGAGGACATGTCCCAGCCTTCTATGGTC
TGATCGAACACATCAACCCAGTTCATCATTTACCATATTTGCAAGACTTC
GTTGAGGATACCCTATATCCGAATGCTATTTTGATGGAGTATGTACCAGA
TATTCACCCAATTGATCTATCGAACTACTCCGAAAAACGACTTCATAAGC
TCCAGCAGATACTGTTAGAGATGCACCGTGCTGGTGTTTACCATGGGGAT
CTATATCCTCGCAACCTGATGGTACAGATAACATCCGATCGAGTATTATG
GATGGATTTCGATCGCGCGCAGACATTCACGCCCCAGTCGATTAAAGAGT
GTCACCTGACTTGGTTGGAACGTGAGACAAGAATGATGGAAGAATTTGTT
GAGGGTCTTACAGCCGATGCTAAGCTCGGAAGGATTCATGAGACGTGGAT
CTGCTACTATGAAGGCTTTAGACCCCCCAAGGATGAAGGAAGGGAGGTAT
TGCTAAACGAGGAACAGGGGGGAATATAGATGTGCCGAGGCCTTCCCAGA
TATCTATCCTTCACTGCTTCTCACCCAAGGGGTTCCCAACGTCATTCATC
CTCAAGGTCCATCGCATCGCAGGAGCCACCACCCATGACGACTTTCAGCC
CTTCCGAGGTCAGCTTTGTGAAGCAGCTCAAGAATTCACCAGTTTCTTGT
ATCTTTCGCACAGTATGGCATGGGAAAGATTGTATCTTGAAAGTGTATCA
CTCTCCACAGCCATTATCCGTCAAACATCGAAGTCGTCGTCGAGATCGCG
AGACCGATCCATTCAAGTGCGAAAGCGCGGCATTTATGCGTCTACGAGAA
CATGGCTTCTGTGACCGAGGACATGTCCCAGCCTTCTATGGTCTGATCGA
ACACATCAACCCAGTTCATCATTTACCATATTTGCAAGACTTCGTTGAGG
ATACCCTATATCCGAATGCTATTTTGATGGAGTATGTACCAGATATTCAC
CCAATTGATCTATCGAACTACTCCGAAAAACGACTTCATAAGCTCCAGCA
GATACTGTTAGAGATGCACCGTGCTGGTGTTTACCATGGGGATCTATATC
CTCGCAACCTGATGGTACAGATAACATCCGATCGAGTATTATGGATGGAT
TTCGATCGCGCGCAGACATTCACGCCCCAGTCGATTAAAGAGTGTCACCT
GACTTGGTTGGAACGTGAGACAAGAATGATGGAAGAATTTGTTGAGGGTC
TTACAGCCGATGCTAAGCTCGGAAGGATTCATGAGACGTGGATCTGCTAC
TATGAAGGCTTTAGACCCCCCAAGGATGAAGGAAGGGAGGTATTGCTAAA
CGAGGAACAGGGGGGAATATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011411KJC3_011411Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011411-T1KJC3_011411-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011411-T1.utr5p1KJC3_011411-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011411-T1.exon1KJC3_011411-T1.exon1Aspergillus niger KJC3exon
KJC3_011411-T1.exon2KJC3_011411-T1.exon2Aspergillus niger KJC3exon
KJC3_011411-T1.exon3KJC3_011411-T1.exon3Aspergillus niger KJC3exon
KJC3_011411-T1.exon4KJC3_011411-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011411-T1.cdsKJC3_011411-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011411-T1.utr3p1KJC3_011411-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011009
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:552459..554204 +
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