|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:610209..611632- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011430-T1 ID=KJC3_011430-T1|Name=KJC3_011430-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1424bp|location=Sequence derived from alignment at ch8:610209..611632- (Aspergillus niger KJC3)
CTTATCCCTGAACGTGCCTGTCTGGCTTTCTATTCTCACTGTAAACTCAT
CGATATGAGTTCTTCCGAGCTAAAAAGCCCATCATTGGTTACGACTAGCC
TCTTAACAGTCTCCATTATCTTTCCCATTCTTGGCACCATCGCTGTCTGT
CTCCGCATTTATGCTTCTTTTCTCAAATCCAGGCGACTCTTTTTGGATGA
TTATATTATCATACTGGCCCAGCTTTGTGCGTGGGGAATATCTATCGATA
CCTTTACAGCAGCATCGATCGGAGGACTAAACTATACCAAAGGGGATGTT
ATCTCGGCCACAATTGCTTTTCTCCGGGTAAGCTTTGTCTTCGCGCTCCC
TTCGGAAGACATATCACTCAACTGTGGCACTAGGCCCTATGGATTGAAGG
ATTCCCTCTCGTGGGCAGTTTGGCGCTGGTGAAGATATCTATTCTGTTAT
TCTACGCCAGAATTTTCGTCACCCGCCCATTTCGCATCGCAACGTATACA
TTTGTCGCTGTCCTAGCATGCTGGGGTATAGCGATAGCCGTTGTAAGCAA
ACTTTCCTCGCTGCCTCCCTGCCCGAGTAACAATTAAACTGACATAGAAT
GTAGGCACAGCTACTCTGTGCGAGCCCAATCAACGCAGCCTGGAATCCTT
ACGCCGTAAACCCTCTGCGCTACAACTATAACGCTTTCTCCGAAGCGTTC
GCAGGCATGAGTATGGTTTTTGACATAATCGTACTGTGCTTTCCGATTCC
AGCGGTCTATCGTTTACAAATGTCCACCCGCCAAAAGCTCCAAGTCATGG
GCATTTTTTGGCTGGGCTTGTTGTAAGTACCATTCTGGATCCGCGAGCCT
TCGTCGATCTTCAGAACATTTTGTCAACTGACTTTGTCTCGCTCTACTTT
GCATTTAGTTGCTGTATCTCCTCTGCTATCCGCTTCTACTATATCTATAG
TGACATTCACCAATCTGTCGCTTCAAATAATGTGAACCGGTATGCAGTCG
TCACCACCGCCTTTACCTGGGGTACCATCGAGCCCAATGCCAGTATTATA
TCTGCTTGTCTGCCGCTGTATGGCAACCTGTTTGGGGGTGACAAAAAGTT
GGGCTTCTATATCCGGAGTTGGTTCAGCCGTCTTACCTCGGGAAGCGGCA
GCACTGGGGATCAAAGTCGAGGATCAAAAGCTAAGGCGTATAATTCAGTG
GATACAAGTGGCAGTTCTTCCCATCACCGACGCGAGTGGCAGAAGCTGGA
TATCCGGACACATCATACGTCGGATATTGAGCTTGGACACACAGTGACGG
ATGATCAGGTACCCTTGGCAAGGGAGCCACAGATGCAAATAATGATTAGT
AGGAGCTTCATACAGGAAACAGCATAGTTCTCATTGAGACCAAAATAAGA
CCTGGAGAGGCGGCGGATGGGTGA back to topCoding sequence (CDS) from alignment at ch8:610209..611632- >KJC3_011430-T1 ID=KJC3_011430-T1|Name=KJC3_011430-T1|organism=Aspergillus niger KJC3|type=CDS|length=4476bp|location=Sequence derived from alignment at ch8:610209..611632- (Aspergillus niger KJC3)
TTGCTGTATCTCCTCTGCTATCCGCTTCTACTATATCTATAGTGACATTC
ACCAATCTGTCGCTTCAAATAATGTGAACCGGTATGCAGTCGTCACCACC
GCCTTTACCTGGGGTACCATCGAGCCCAATGCCAGTATTATATCTGCTTG
TCTGCCGCTGTATGGCAACCTGTTTGGGGGTGACAAAAAGTTGGGCTTCT
ATATCCGGAGTTGGTTCAGCCGTCTTACCTCGGGAAGCGGCAGCACTGGG
GATCAAAGTCGAGGATCAAAAGCTAAGGCGTATAATTCAGTGGATACAAG
TGGCAGTTCTTCCCATCACCGACGCGAGTGGCAGAAGCTGGATATCCGGA
CACATCATACGTCGGATATTGAGCTTGGACACACAGTGACGGATGATCAG
GTACCCTTGGCAAGGGAGCCACAGATGCAAATAATGATTAGTAGGAGCTT
CATACAGGAAACAGCATAGGCACAGCTACTCTGTGCGAGCCCAATCAACG
CAGCCTGGAATCCTTACGCCGTAAACCCTCTGCGCTACAACTATAACGCT
TTCTCCGAAGCGTTCGCAGGCATGAGTATGGTTTTTGACATAATCGTACT
GTGCTTTCCGATTCCAGCGGTCTATCGTTTACAAATGTCCACCCGCCAAA
AGCTCCAAGTCATGGGCATTTTTTGGCTGGGCTTGTTGCCCTATGGATTG
AAGGATTCCCTCTCGTGGGCAGTTTGGCGCTGGTGAAGATATCTATTCTG
TTATTCTACGCCAGAATTTTCGTCACCCGCCCATTTCGCATCGCAACGTA
TACATTTGTCGCTGTCCTAGCATGCTGGGGTATAGCGATAGCCGTTATGA
GTTCTTCCGAGCTAAAAAGCCCATCATTGGTTACGACTAGCCTCTTAACA
GTCTCCATTATCTTTCCCATTCTTGGCACCATCGCTGTCTGTCTCCGCAT
TTATGCTTCTTTTCTCAAATCCAGGCGACTCTTTTTGGATGATTATATTA
TCATACTGGCCCAGCTTTGTGCGTGGGGAATATCTATCGATACCTTTACA
GCAGCATCGATCGGAGGACTAAACTATACCAAAGGGGATGTTATCTCGGC
CACAATTGCTTTTCTCCGGTTGCTGTATCTCCTCTGCTATCCGCTTCTAC
TATATCTATAGTGACATTCACCAATCTGTCGCTTCAAATAATGTGAACCG
GTATGCAGTCGTCACCACCGCCTTTACCTGGGGTACCATCGAGCCCAATG
CCAGTATTATATCTGCTTGTCTGCCGCTGTATGGCAACCTGTTTGGGGGT
GACAAAAAGTTGGGCTTCTATATCCGGAGTTGGTTCAGCCGTCTTACCTC
GGGAAGCGGCAGCACTGGGGATCAAAGTCGAGGATCAAAAGCTAAGGCGT
ATAATTCAGTGGATACAAGTGGCAGTTCTTCCCATCACCGACGCGAGTGG
CAGAAGCTGGATATCCGGACACATCATACGTCGGATATTGAGCTTGGACA
CACAGTGACGGATGATCAGGTACCCTTGGCAAGGGAGCCACAGATGCAAA
TAATGATTAGTAGGAGCTTCATACAGGAAACAGCATAGGCACAGCTACTC
TGTGCGAGCCCAATCAACGCAGCCTGGAATCCTTACGCCGTAAACCCTCT
GCGCTACAACTATAACGCTTTCTCCGAAGCGTTCGCAGGCATGAGTATGG
TTTTTGACATAATCGTACTGTGCTTTCCGATTCCAGCGGTCTATCGTTTA
CAAATGTCCACCCGCCAAAAGCTCCAAGTCATGGGCATTTTTTGGCTGGG
CTTGTTGCCCTATGGATTGAAGGATTCCCTCTCGTGGGCAGTTTGGCGCT
GGTGAAGATATCTATTCTGTTATTCTACGCCAGAATTTTCGTCACCCGCC
CATTTCGCATCGCAACGTATACATTTGTCGCTGTCCTAGCATGCTGGGGT
ATAGCGATAGCCGTTATGAGTTCTTCCGAGCTAAAAAGCCCATCATTGGT
TACGACTAGCCTCTTAACAGTCTCCATTATCTTTCCCATTCTTGGCACCA
TCGCTGTCTGTCTCCGCATTTATGCTTCTTTTCTCAAATCCAGGCGACTC
TTTTTGGATGATTATATTATCATACTGGCCCAGCTTTGTGCGTGGGGAAT
ATCTATCGATACCTTTACAGCAGCATCGATCGGAGGACTAAACTATACCA
AAGGGGATGTTATCTCGGCCACAATTGCTTTTCTCCGGTTGCTGTATCTC
CTCTGCTATCCGCTTCTACTATATCTATAGTGACATTCACCAATCTGTCG
CTTCAAATAATGTGAACCGGTATGCAGTCGTCACCACCGCCTTTACCTGG
GGTACCATCGAGCCCAATGCCAGTATTATATCTGCTTGTCTGCCGCTGTA
TGGCAACCTGTTTGGGGGTGACAAAAAGTTGGGCTTCTATATCCGGAGTT
GGTTCAGCCGTCTTACCTCGGGAAGCGGCAGCACTGGGGATCAAAGTCGA
GGATCAAAAGCTAAGGCGTATAATTCAGTGGATACAAGTGGCAGTTCTTC
CCATCACCGACGCGAGTGGCAGAAGCTGGATATCCGGACACATCATACGT
CGGATATTGAGCTTGGACACACAGTGACGGATGATCAGGTACCCTTGGCA
AGGGAGCCACAGATGCAAATAATGATTAGTAGGAGCTTCATACAGGAAAC
AGCATAGGCACAGCTACTCTGTGCGAGCCCAATCAACGCAGCCTGGAATC
CTTACGCCGTAAACCCTCTGCGCTACAACTATAACGCTTTCTCCGAAGCG
TTCGCAGGCATGAGTATGGTTTTTGACATAATCGTACTGTGCTTTCCGAT
TCCAGCGGTCTATCGTTTACAAATGTCCACCCGCCAAAAGCTCCAAGTCA
TGGGCATTTTTTGGCTGGGCTTGTTGCCCTATGGATTGAAGGATTCCCTC
TCGTGGGCAGTTTGGCGCTGGTGAAGATATCTATTCTGTTATTCTACGCC
AGAATTTTCGTCACCCGCCCATTTCGCATCGCAACGTATACATTTGTCGC
TGTCCTAGCATGCTGGGGTATAGCGATAGCCGTTATGAGTTCTTCCGAGC
TAAAAAGCCCATCATTGGTTACGACTAGCCTCTTAACAGTCTCCATTATC
TTTCCCATTCTTGGCACCATCGCTGTCTGTCTCCGCATTTATGCTTCTTT
TCTCAAATCCAGGCGACTCTTTTTGGATGATTATATTATCATACTGGCCC
AGCTTTGTGCGTGGGGAATATCTATCGATACCTTTACAGCAGCATCGATC
GGAGGACTAAACTATACCAAAGGGGATGTTATCTCGGCCACAATTGCTTT
TCTCCGGTTGCTGTATCTCCTCTGCTATCCGCTTCTACTATATCTATAGT
GACATTCACCAATCTGTCGCTTCAAATAATGTGAACCGGTATGCAGTCGT
CACCACCGCCTTTACCTGGGGTACCATCGAGCCCAATGCCAGTATTATAT
CTGCTTGTCTGCCGCTGTATGGCAACCTGTTTGGGGGTGACAAAAAGTTG
GGCTTCTATATCCGGAGTTGGTTCAGCCGTCTTACCTCGGGAAGCGGCAG
CACTGGGGATCAAAGTCGAGGATCAAAAGCTAAGGCGTATAATTCAGTGG
ATACAAGTGGCAGTTCTTCCCATCACCGACGCGAGTGGCAGAAGCTGGAT
ATCCGGACACATCATACGTCGGATATTGAGCTTGGACACACAGTGACGGA
TGATCAGGTACCCTTGGCAAGGGAGCCACAGATGCAAATAATGATTAGTA
GGAGCTTCATACAGGAAACAGCATAGGCACAGCTACTCTGTGCGAGCCCA
ATCAACGCAGCCTGGAATCCTTACGCCGTAAACCCTCTGCGCTACAACTA
TAACGCTTTCTCCGAAGCGTTCGCAGGCATGAGTATGGTTTTTGACATAA
TCGTACTGTGCTTTCCGATTCCAGCGGTCTATCGTTTACAAATGTCCACC
CGCCAAAAGCTCCAAGTCATGGGCATTTTTTGGCTGGGCTTGTTGCCCTA
TGGATTGAAGGATTCCCTCTCGTGGGCAGTTTGGCGCTGGTGAAGATATC
TATTCTGTTATTCTACGCCAGAATTTTCGTCACCCGCCCATTTCGCATCG
CAACGTATACATTTGTCGCTGTCCTAGCATGCTGGGGTATAGCGATAGCC
GTTATGAGTTCTTCCGAGCTAAAAAGCCCATCATTGGTTACGACTAGCCT
CTTAACAGTCTCCATTATCTTTCCCATTCTTGGCACCATCGCTGTCTGTC
TCCGCATTTATGCTTCTTTTCTCAAATCCAGGCGACTCTTTTTGGATGAT
TATATTATCATACTGGCCCAGCTTTGTGCGTGGGGAATATCTATCGATAC
CTTTACAGCAGCATCGATCGGAGGACTAAACTATACCAAAGGGGATGTTA
TCTCGGCCACAATTGCTTTTCTCCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011430-T1.utr3p1 | KJC3_011430-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011430-T1.utr5p1 | KJC3_011430-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.2 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:610209..611632 - |
|
