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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:616324..617769+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011433-T1 ID=KJC3_011433-T1|Name=KJC3_011433-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1446bp|location=Sequence derived from alignment at ch8:616324..617769+ (Aspergillus niger KJC3)
ATCCAAGTTCTGTCAGCCATTCTCTTCGCTCGCCTTTTGCGCATCTTTTC
CTTATTGCTGAATCATGAAGCTCCCCTACGGCATCAACCCGTGGTGGGCT
GTCTTAAGCCCTAGCGCAGCTTGGTCCATCTCAACTCAGGGGCTGACCGA
CGCTACCATCGGTAAATCATCTGGAGGGAATTCAATTTGCGCCTCGGGTT
ACATCAATATTCCCATCTCCGTCAATGGCACCAAGCTCGACTATGTCGCT
CCTTCCTCGCCGAACGCAGTAACTGAGTCGATGGTCGAGCTTTTCCAGAC
CACCAACAGCCTTCCTGTGACCGCACCCGACGGCACCCAGCTTATCCAGG
GTGATTGGGATATATATGTGAAGTTTTGTTTACCTTCATCGGCGGCCAAA
GCCGCCAAGGTAAAGACTGTCCAAGTCCTAACCCACGGGGCGACACTGGA
TCATACCTACTGGGATATCAGTCCTGACCATAGCTATGTGGATGTTGCCA
CTGCCGCCGGTTATGCCACACTCTCCTACGACCAACTCGGAGTGGGCAAT
TCCCATCATCCCGATCCGATTCAGGAAGTGCAAGCCAACAGCCAGGTAGC
AGTAACGCATGCCTTAACGCAGCTGCTGCGTTCCTCGAAAATTGGAAATT
ACTCTTTCCAGAACGTGGTGGGCGTCGGCCACAGCGCCGGCAGTACCTTG
ACCCAGGCTATCACAACACAGTACCCAAAGGACTTTGACGCTATTATCCT
CTCTGGAACGAGCACCAATCAGAACTACGTCTCGCTCACTATGGCGGCTT
TCAACTTTATCAACGCAAACTCAGATTCTTCGGGCCGCTTTTCTTCGTTG
CCTGCTGGCTACCTGACTCAAGAGACATCAACAGGGATTCAATTCGCCTT
TTATCGCTATCCTAACTACGACTCCACGGCATTCGAACTTCAGGTTGCCG
GTAAACAGACGAACACTCTCGGAGTCTTGCTGACTCTGGGTGGCCTCGTC
GCCGAGGCCCCCGATTTCACCGGGCCTGTGGACATCATCCTAGGGGAAAA
TGACCTTGTTTTTTGTGGCGGCAACTGCTCCTATCCGGAAAACCAGGCCT
CTTTGTACACCTCCACCTATTACCCTAATGCTTCCTCAGGCAGTCAATAT
TATCTGGCCGAAGGTTCTGGGCACTGCATCGCTGCTCATAAGAGTGCAAG
CTCCAGCTTCCAGCAGATGATTTCATTCTTGCAGGCAAATGGAATTTATT
GAGTCCGAAGCACTCTCCGCCAGTTTTTATCACTTCTCTGTTCTATATTT
CAGGTACAAAAACCTACGGGTCATTCGCTTCGTCTTCTGGAAATCTATTC
TTTGTTTTAATGTACGCGTAATCCTGTTATATATTATCCAATGCAACAAA
TGTGGTTGGAGATTAAGACTAGATAAGATCCCAAATAGAAACAGCG back to topCoding sequence (CDS) from alignment at ch8:616324..617769+ >KJC3_011433-T1 ID=KJC3_011433-T1|Name=KJC3_011433-T1|organism=Aspergillus niger KJC3|type=CDS|length=1188bp|location=Sequence derived from alignment at ch8:616324..617769+ (Aspergillus niger KJC3)
ATGAAGCTCCCCTACGGCATCAACCCGTGGTGGGCTGTCTTAAGCCCTAG
CGCAGCTTGGTCCATCTCAACTCAGGGGCTGACCGACGCTACCATCGGTA
AATCATCTGGAGGGAATTCAATTTGCGCCTCGGGTTACATCAATATTCCC
ATCTCCGTCAATGGCACCAAGCTCGACTATGTCGCTCCTTCCTCGCCGAA
CGCAGTAACTGAGTCGATGGTCGAGCTTTTCCAGACCACCAACAGCCTTC
CTGTGACCGCACCCGACGGCACCCAGCTTATCCAGGGTGATTGGGATATA
TATGTGAAGTTTTGTTTACCTTCATCGGCGGCCAAAGCCGCCAAGGTAAA
GACTGTCCAAGTCCTAACCCACGGGGCGACACTGGATCATACCTACTGGG
ATATCAGTCCTGACCATAGCTATGTGGATGTTGCCACTGCCGCCGGTTAT
GCCACACTCTCCTACGACCAACTCGGAGTGGGCAATTCCCATCATCCCGA
TCCGATTCAGGAAGTGCAAGCCAACAGCCAGGTAGCAGTAACGCATGCCT
TAACGCAGCTGCTGCGTTCCTCGAAAATTGGAAATTACTCTTTCCAGAAC
GTGGTGGGCGTCGGCCACAGCGCCGGCAGTACCTTGACCCAGGCTATCAC
AACACAGTACCCAAAGGACTTTGACGCTATTATCCTCTCTGGAACGAGCA
CCAATCAGAACTACGTCTCGCTCACTATGGCGGCTTTCAACTTTATCAAC
GCAAACTCAGATTCTTCGGGCCGCTTTTCTTCGTTGCCTGCTGGCTACCT
GACTCAAGAGACATCAACAGGGATTCAATTCGCCTTTTATCGCTATCCTA
ACTACGACTCCACGGCATTCGAACTTCAGGTTGCCGGTAAACAGACGAAC
ACTCTCGGAGTCTTGCTGACTCTGGGTGGCCTCGTCGCCGAGGCCCCCGA
TTTCACCGGGCCTGTGGACATCATCCTAGGGGAAAATGACCTTGTTTTTT
GTGGCGGCAACTGCTCCTATCCGGAAAACCAGGCCTCTTTGTACACCTCC
ACCTATTACCCTAATGCTTCCTCAGGCAGTCAATATTATCTGGCCGAAGG
TTCTGGGCACTGCATCGCTGCTCATAAGAGTGCAAGCTCCAGCTTCCAGC
AGATGATTTCATTCTTGCAGGCAAATGGAATTTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011433-T1.utr5p1 | KJC3_011433-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011433-T1.utr3p1 | KJC3_011433-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022742 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:616324..617769 + |
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