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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:626652..629468+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011436-T1 ID=KJC3_011436-T1|Name=KJC3_011436-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2817bp|location=Sequence derived from alignment at ch8:626652..629468+ (Aspergillus niger KJC3)
GGAAATATGTCCAGTAAGCTTGCATTTCCTGCAGAGCCAACAGATATCAG
ACAACATGATCGGGGTACCTTCCGGTTGGCGCTGAATCACTCGGCGGTTA
TCATGGTTGAACTAAGAGGTGATGTTCCATGTCCGACACCTAAGCGCTTG
AATACCTCCTAGTCGCTCCTAAGGATAGGCTCTCGGCTTCCAAAATTATT
CTTCCGCAGTCCCTTGAGACACTATCATGCAATGGCCTTGCAGTCAAAGA
GCGCGCAAGGCTGATTCTGTTCCACCTGTCCTATGACGGAAGTACAAATC
CACCAACAATACGATTGTACCGCTCGCAGGGTGCTACTGTAGGCAATAGT
GTCAGCTGGTGCTTTACAGCTCCATGCATGGCTCTCAAGCTGAATATGCA
TACCGCGCCGCCGCTCTTACAGGCTGCCCCGTCCCAGCAGTATGGAACCC
CGTAATCACTTCGCATGCCAACGCACTCCCATATGTCTCGAGTATCGCAG
CCTTGTATGCAGCAACAAGGTATGACGTGTCAGTTGCGTCTCGGGACTGG
TCTTCATTCCCCGCAGTAGCATCGCAGTTTTGACATTGTTTATTACCTCC
TGTGATCCTAGATATGAAGGCGTCCTCCCGGACTTTCAGACATCAACACC
TTTACTTGTCAGCAAGCTGCCGACACAAGCATCGTCATGGGTAAGAAGGG
TTGCTCGAAGAAAAAAAACAAGGCAAGTAGCGTGACTTGGGCACAAGAGC
CTAGCACATCCCCGGAAGATGAAGTTCTTGTGACACGTCCAGAAGACGAG
ATGGCCGAGCAACCTACGGAGCCACCCGCTGAGGAATATTCTTCCCTTAA
TATCCCAGTGCTCAATGATTACAAGCAAGTGACTGAATGGTAAGCCACAT
CCATACCCGCATTCCACCTTCTCTATGCCTGTTCACCTGTATCCCAACTC
ACTGTGTACGTCGCTTGATGAAGCCATCTCTAACTTCAAGATATGTATAG
TCCCTACACCTCCCCCATCATCACTCTCAAGGTTCAAGACATGTACTACA
AGATTCCACAACATTACCTCCGGCCCTATAAGAGTTTGCTATTCGAACTA
AATTCTGTGCGCCGGGAGATCTTCGGTGACTACTATCATCATGAGCTGAA
CGTCCACCCAGAGGTTGCCCATACCTTTGTTCATTACCTGTACACTGAGC
AGTATGAGACACCTGAAACACAATTTGAACCCCCTCAGTCAGCGGACGAC
ATCCCCGCAATAACCAAAGCCCGCGATAGCATAGAGTTCCAGCGCGCAGT
CTACGCGTATCAGGCTGCCGCTCGGTACCAGATCCCGGGGCTACTGAGCA
TGGCACAAGGCTTTACGGCCCGATTCGCCGAGAGATTGTCAATAAACGAC
ATTCTGCGTGCTATAAGATGTGTATATGGCAGCCTGATTGCGGAGTATTC
TTGCCGCATGTGGCTTGAGGACTTTGTTCGAGACCAATTGAGTATCGCAT
TCAGCATCACAGATGGAAAGCTCAGACAGATCATCAAGGAGTATGAGGTT
GGACATAGTAGAAGCTTCGATCTTTTCCTTGTTGATGAAGTCCTGGCACT
CTACGAAAGGGAGCAAGACAGAGTAAATCATGTGAAAAGCTTGGACAATT
CAAGGAGAGAACACGACCCTATGCTTCAGCCTGAGCCTATGCTTGAGCCT
TACTGTGAGCCGGTGTGTGAGCCTGAGCCTTTGTGTAGGCCTCCATATAT
GGAGCCTTCCTTTGAGCCTCCGTGCGAGCCTGAGCCTGAGCCTGAGCCTG
AGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAACCTGCATATGAG
CCAGTGTGTGAGCCTGAGCCTGAGCCTGAGCCTGTGTATGAGCCGGTGTG
TGAGCCTCCGTATGAGGAGCCTTACCGTGAGCCTGAGCCTGAGCCTGTGT
ATGAGCCGGTGTGTGAGCCGGTGTGTGAGCCTCCGTATGAGGAGCCTTAC
CGTGAGCCTGCATGCGAGCCTGAGCCACTATTCAGATCCGTTGCAGAAGA
GGCAATACCAACTCCAGCTCCAGAACCGGAGCCAGAACCTATTCCTGAGC
CTGACTCCCTAGCTCCTGAGATACCAGATTGCCATCTCTATGACAACTGG
AACACACTCACCCAAAAGGACCGGAGGAAACGTGAGAGGTCTTTGATCAA
GATAGGGTTTCCTATCCCTGGTAAAGATTTCGAACTTCCTGTTCCGGATT
ATGAACCTCCTGCTGCAGAGCGTGAATCTTCTGCTGAACGGTCTGAACCT
CCTGCTGCAGAGCCTGAACCTCCTGAATTGGACGATGGTTGGGGATTTTC
GACCTCGGCCTCATCTAAGAAACGAAAGAATCTTGAGAGATTATCCGTCA
ACATGGGACATCCTATTCCGGGTAAGGATTGCAGTTTATCTATTTCAGCA
GATGAGTGCCCTCCTCGAGAGCGTGAACCTGAGCCTGAACCCGTCCCCAG
GTCAGGTTCATCTTCTGGGTCTTGGGAGATGCCAAACTCCATTAATCATA
GATGATTAAAGAGAGGATAATGCAGAATCTGCCAAACGAGAACAAATGAA
AAGGAGGGAAGGAGATAGATGATCCCGGGAATTTGAAGCATGGTTCAGCT
GAGCATAAGGGGCAGTAGGACTATCAGCATTGTCTGGATAATCTATAGTA
TCTGTTTGAGGTAGACCGGGAACTTAAGCCGCCTATTGTCGCTTCTGCTG
TTGTCATATTCGAACAAGAAGCCTAGTGAGGGTTTTACGAGACTGCCTAC
AATTATGATTTCCTGAG back to topCoding sequence (CDS) from alignment at ch8:626652..629468+ >KJC3_011436-T1 ID=KJC3_011436-T1|Name=KJC3_011436-T1|organism=Aspergillus niger KJC3|type=CDS|length=3516bp|location=Sequence derived from alignment at ch8:626652..629468+ (Aspergillus niger KJC3)
ATGGGTAAGAAGGGTTGCTCGAAGAAAAAAAACAAGGCAAGTAGCGTGAC
TTGGGCACAAGAGCCTAGCACATCCCCGGAAGATGAAGTTCTTGTGACAC
GTCCAGAAGACGAGATGGCCGAGCAACCTACGGAGCCACCCGCTGAGGAA
TATTCTTCCCTTAATATCCCAGTGCTCAATGATTACAAGCAAGTGACTGA
ATGTCCCTACACCTCCCCCATCATCACTCTCAAGGTTCAAGACATGTACT
ACAAGATTCCACAACATTACCTCCGGCCCTATAAGAGTTTGCTATTCGAA
CTAAATTCTGTGCGCCGGGAGATCTTCGGTGACTACTATCATCATGAGCT
GAACGTCCACCCAGAGGTTGCCCATACCTTTGTTCATTACCTGTACACTG
AGCAGTATGAGACACCTGAAACACAATTTGAACCCCCTCAGTCAGCGGAC
GACATCCCCGCAATAACCAAAGCCCGCGATAGCATAGAGTTCCAGCGCGC
AGTCTACGCGTATCAGGCTGCCGCTCGGTACCAGATCCCGGGGCTACTGA
GCATGGCACAAGGCTTTACGGCCCGATTCGCCGAGAGATTGTCAATAAAC
GACATTCTGCGTGCTATAAGATGTGTATATGGCAGCCTGATTGCGGAGTA
TTCTTGCCGCATGTGGCTTGAGGACTTTGTTCGAGACCAATTGAGTATCG
CATTCAGCATCACAGATGGAAAGCTCAGACAGATCATCAAGGAGTATGAG
GTTGGACATAGTAGAAGCTTCGATCTTTTCCTTGTTGATGAAGTCCTGGC
ACTCTACGAAAGGGAGCAAGACAGAGTAAATCATGTGAAAAGCTTGGACA
ATTCAAGGAGAGAACACGACCCTATGCTTCAGCCTGAGCCTATGCTTGAG
CCTTACTGTGAGCCGGTGTGTGAGCCTGAGCCTTTGTGTAGGCCTCCATA
TATGGAGCCTTCCTTTGAGCCTCCGTGCGAGCCTGAGCCTGAGCCTGAGC
CTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAACCTGCATAT
GAGCCAGTGTGTGAGCCTGAGCCTGAGCCTGAGCCTGTGTATGAGCCGGT
GTGTGAGCCTCCGTATGAGGAGCCTTACCGTGAGCCTGAGCCTGAGCCTG
TGTATGAGCCGGTGTGTGAGCCGGTGTGTGAGCCTCCGTATGAGGAGCCT
TACCGTGAGCCTGCATGCGAGCCTGAGCCACTATTCAGATCCGTTGCAGA
AGAGGCAATACCAACTCCAGCTCCAGAACCGGAGCCAGAACCTATTCCTG
AGCCTGACTCCCTAGCTCCTGAGATACCAGATTGCCATCTCTATGACAAC
TGGAACACACTCACCCAAAAGGACCGGAGGAAACGTGAGAGGTCTTTGAT
CAAGATAGGGTTTCCTATCCCTGGTAAAGATTTCGAACTTCCTGTTCCGG
ATTATGAACCTCCTGCTGCAGAGCGTGAATCTTCTGCTGAACGGTCTGAA
CCTCCTGCTGCAGAGCCTGAACCTCCTGAATTGGACGATGGTTGGGGATT
TTCGACCTCGGCCTCATCTAAGAAACGAAAGAATCTTGAGAGATTATCCG
TCAACATGGGACATCCTATTCCGGGTAAGGATTGCAGTTTATCTATTTCA
GCAGATGAGTGCCCTCCTCGAGAGCGTGAACCTGAGCCTGAACCCGTCCC
CAGGTCAGGTTCATCTTCTGGGTCTTGGGAGATGCCAAACTCCATTAATC
ATAGATGAATGGGTAAGAAGGGTTGCTCGAAGAAAAAAAACAAGGCAAGT
AGCGTGACTTGGGCACAAGAGCCTAGCACATCCCCGGAAGATGAAGTTCT
TGTGACACGTCCAGAAGACGAGATGGCCGAGCAACCTACGGAGCCACCCG
CTGAGGAATATTCTTCCCTTAATATCCCAGTGCTCAATGATTACAAGCAA
GTGACTGAATGTCCCTACACCTCCCCCATCATCACTCTCAAGGTTCAAGA
CATGTACTACAAGATTCCACAACATTACCTCCGGCCCTATAAGAGTTTGC
TATTCGAACTAAATTCTGTGCGCCGGGAGATCTTCGGTGACTACTATCAT
CATGAGCTGAACGTCCACCCAGAGGTTGCCCATACCTTTGTTCATTACCT
GTACACTGAGCAGTATGAGACACCTGAAACACAATTTGAACCCCCTCAGT
CAGCGGACGACATCCCCGCAATAACCAAAGCCCGCGATAGCATAGAGTTC
CAGCGCGCAGTCTACGCGTATCAGGCTGCCGCTCGGTACCAGATCCCGGG
GCTACTGAGCATGGCACAAGGCTTTACGGCCCGATTCGCCGAGAGATTGT
CAATAAACGACATTCTGCGTGCTATAAGATGTGTATATGGCAGCCTGATT
GCGGAGTATTCTTGCCGCATGTGGCTTGAGGACTTTGTTCGAGACCAATT
GAGTATCGCATTCAGCATCACAGATGGAAAGCTCAGACAGATCATCAAGG
AGTATGAGGTTGGACATAGTAGAAGCTTCGATCTTTTCCTTGTTGATGAA
GTCCTGGCACTCTACGAAAGGGAGCAAGACAGAGTAAATCATGTGAAAAG
CTTGGACAATTCAAGGAGAGAACACGACCCTATGCTTCAGCCTGAGCCTA
TGCTTGAGCCTTACTGTGAGCCGGTGTGTGAGCCTGAGCCTTTGTGTAGG
CCTCCATATATGGAGCCTTCCTTTGAGCCTCCGTGCGAGCCTGAGCCTGA
GCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAAC
CTGCATATGAGCCAGTGTGTGAGCCTGAGCCTGAGCCTGAGCCTGTGTAT
GAGCCGGTGTGTGAGCCTCCGTATGAGGAGCCTTACCGTGAGCCTGAGCC
TGAGCCTGTGTATGAGCCGGTGTGTGAGCCGGTGTGTGAGCCTCCGTATG
AGGAGCCTTACCGTGAGCCTGCATGCGAGCCTGAGCCACTATTCAGATCC
GTTGCAGAAGAGGCAATACCAACTCCAGCTCCAGAACCGGAGCCAGAACC
TATTCCTGAGCCTGACTCCCTAGCTCCTGAGATACCAGATTGCCATCTCT
ATGACAACTGGAACACACTCACCCAAAAGGACCGGAGGAAACGTGAGAGG
TCTTTGATCAAGATAGGGTTTCCTATCCCTGGTAAAGATTTCGAACTTCC
TGTTCCGGATTATGAACCTCCTGCTGCAGAGCGTGAATCTTCTGCTGAAC
GGTCTGAACCTCCTGCTGCAGAGCCTGAACCTCCTGAATTGGACGATGGT
TGGGGATTTTCGACCTCGGCCTCATCTAAGAAACGAAAGAATCTTGAGAG
ATTATCCGTCAACATGGGACATCCTATTCCGGGTAAGGATTGCAGTTTAT
CTATTTCAGCAGATGAGTGCCCTCCTCGAGAGCGTGAACCTGAGCCTGAA
CCCGTCCCCAGGTCAGGTTCATCTTCTGGGTCTTGGGAGATGCCAAACTC
CATTAATCATAGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011436-T1.utr5p1 | KJC3_011436-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011436-T1.utr3p1 | KJC3_011436-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:626652..629468 + |
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