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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:683096..684619- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011450-T1 ID=KJC3_011450-T1|Name=KJC3_011450-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1524bp|location=Sequence derived from alignment at ch8:683096..684619- (Aspergillus niger KJC3)
CAGCTTCCGCTCTTCCAGAACATGCCATGGCAGGCTGTGAATCCCTGAAG
ACATTGTGATCAGTCTACTCCGTATTTTCTCTACTGAAACTCCGAGGAAA
AGTAAATTGACCGGTGCTAAGCAGCGTGTTGGGGCACCCACGCCCCAGAA
GCACGAGACCCCCAGGAAAGGCGGTGTCTCCTCATCCGGTAACATTACCC
GGGTGTATAATTACCGCCGGGGCTGGGCCGAGTCGTATGACAAACGCAAA
ATACCGAGTAAAATACCCAGCGTCAAATGTCAAGATTGTCCGTGAAACAT
TTCCCCTCAGTGCTTTAGAGTCGTGCTGCCCACTTTTCTGCTTAGTACTT
TAACGCTCGCGATATCCTTCGTCTGAACTAAGGCAATATACATCTCAACT
CCACTATCTACTGATCAATCCAATCGCTCCCTGCATACACCAACCATCGT
CACAATGTCTTCTGCCCCGCCCCACGCCACCAACCCCTCATCGCGCAAGA
CCTTCACCATTGGCACGCGCAAGTCCAAGCTTGCTCTGCTTCAAACAGAC
CTGGTTCAAGCGGCGCTCAAGCAAACATGGCCGGACTATGAATTCAAGAT
TCACTCCCGAGAGACCGCAGGCGACCAGAACACGACCATTGCGCTCCGTG
ACTTTACGACCAAGAACCTGTGGACCCAGGAACTGGAGGACCTTCTGATC
GCTGGCCAGGTTGACTTCATTGTACACTCTCTCAAGGGTGCGTTTCCACT
CGTTCTTTATCTCGCTCAAAGTGACAAAATTAACTTATCTCTATCATTAC
AGATGTGCCGACTCTTCTCCCCTCCTCCTGCACCCTCGGCCCTATGATGA
AGCGCGAAGACACAAGAGACGTCCTGGTCATGAAGAAGGGCCTTTCATAC
ACAAGTCTGGCCGAGCTGCCAGAAGGCTCCGTCGTCGGCACTTCATCCAT
CCGTCGGACCGCCCAACTCGCCCGTCGCTACCCCCACCTCAAAGTTATGG
ATGTGCGCGGTAACATTGGCACTCGGTTGTCGAAGCTAGATGCAGAGGAT
GGCCCTTTCACGTGCCTCATCCTGGCTGCTGCTGGTTTGCTGAGATTGGA
TCTGGGCGATCGTATCACCAGCTATCTGGATTCGAAGAACGGAGGAATGC
TCTATGCTGTCGGTCAGGGTGCTCTCGGCATTGAGATCCGGAAGGATGAC
CAGCAGGTGCTGGATATGCTACAGAACATCGGCCACAAGGAGACCACTTT
TGCTTGCTTGGCAGAGCGGAGCCTCCTGCGTACCCTTGAAGGTGGATGCA
GTGCGCCGTTGGGTGTTGAGTCCGAATGGGTTAATGGTGCTTTGAGGATG
CGGTCCATTGTGGTTAGTGTGGATGGCAAGGAGAGCGCTGAGGTTGAGGT
TGATGGGGCTGTTGATTCGCCTCAGGCTGCGGAAGAGTTCGGTGTTACGG
TGGCTAAGGCATTGGTTGAGAAGGGCGCGGGCAAGATCCTGGACGAAATC
CAGCGCAACAAGCAGACTGCTTAG back to topCoding sequence (CDS) from alignment at ch8:683096..684619- >KJC3_011450-T1 ID=KJC3_011450-T1|Name=KJC3_011450-T1|organism=Aspergillus niger KJC3|type=CDS|length=2010bp|location=Sequence derived from alignment at ch8:683096..684619- (Aspergillus niger KJC3)
ATGTGCCGACTCTTCTCCCCTCCTCCTGCACCCTCGGCCCTATGATGAAG
CGCGAAGACACAAGAGACGTCCTGGTCATGAAGAAGGGCCTTTCATACAC
AAGTCTGGCCGAGCTGCCAGAAGGCTCCGTCGTCGGCACTTCATCCATCC
GTCGGACCGCCCAACTCGCCCGTCGCTACCCCCACCTCAAAGTTATGGAT
GTGCGCGGTAACATTGGCACTCGGTTGTCGAAGCTAGATGCAGAGGATGG
CCCTTTCACGTGCCTCATCCTGGCTGCTGCTGGTTTGCTGAGATTGGATC
TGGGCGATCGTATCACCAGCTATCTGGATTCGAAGAACGGAGGAATGCTC
TATGCTGTCGGTCAGGGTGCTCTCGGCATTGAGATCCGGAAGGATGACCA
GCAGGTGCTGGATATGCTACAGAACATCGGCCACAAGGAGACCACTTTTG
CTTGCTTGGCAGAGCGGAGCCTCCTGCGTACCCTTGAAGGTGGATGCAGT
GCGCCGTTGGGTGTTGAGTCCGAATGGGTTAATGGTGCTTTGAGGATGCG
GTCCATTGTGGTTAGTGTGGATGGCAAGGAGAGCGCTGAGGTTGAGGTTG
ATGGGGCTGTTGATTCGCCTCAGGCTGCGGAAGAGTTCGGTGTTACGGTG
GCTAAGGCATTGGTTGAGAAGGGCGCGGGCAAGATCCTGGACGAAATCCA
GCGCAACAAGCAGACTGCTTAGATGTCTTCTGCCCCGCCCCACGCCACCA
ACCCCTCATCGCGCAAGACCTTCACCATTGGCACGCGCAAGTCCAAGCTT
GCTCTGCTTCAAACAGACCTGGTTCAAGCGGCGCTCAAGCAAACATGGCC
GGACTATGAATTCAAGATTCACTCCCGAGAGACCGCAGGCGACCAGAACA
CGACCATTGCGCTCCGTGACTTTACGACCAAGAACCTGTGGACCCAGGAA
CTGGAGGACCTTCTGATCGCTGGCCAGGTTGACTTCATTGTACACTCTCT
CAAGGATGTGCCGACTCTTCTCCCCTCCTCCTGCACCCTCGGCCCTATGA
TGAAGCGCGAAGACACAAGAGACGTCCTGGTCATGAAGAAGGGCCTTTCA
TACACAAGTCTGGCCGAGCTGCCAGAAGGCTCCGTCGTCGGCACTTCATC
CATCCGTCGGACCGCCCAACTCGCCCGTCGCTACCCCCACCTCAAAGTTA
TGGATGTGCGCGGTAACATTGGCACTCGGTTGTCGAAGCTAGATGCAGAG
GATGGCCCTTTCACGTGCCTCATCCTGGCTGCTGCTGGTTTGCTGAGATT
GGATCTGGGCGATCGTATCACCAGCTATCTGGATTCGAAGAACGGAGGAA
TGCTCTATGCTGTCGGTCAGGGTGCTCTCGGCATTGAGATCCGGAAGGAT
GACCAGCAGGTGCTGGATATGCTACAGAACATCGGCCACAAGGAGACCAC
TTTTGCTTGCTTGGCAGAGCGGAGCCTCCTGCGTACCCTTGAAGGTGGAT
GCAGTGCGCCGTTGGGTGTTGAGTCCGAATGGGTTAATGGTGCTTTGAGG
ATGCGGTCCATTGTGGTTAGTGTGGATGGCAAGGAGAGCGCTGAGGTTGA
GGTTGATGGGGCTGTTGATTCGCCTCAGGCTGCGGAAGAGTTCGGTGTTA
CGGTGGCTAAGGCATTGGTTGAGAAGGGCGCGGGCAAGATCCTGGACGAA
ATCCAGCGCAACAAGCAGACTGCTTAGATGTCTTCTGCCCCGCCCCACGC
CACCAACCCCTCATCGCGCAAGACCTTCACCATTGGCACGCGCAAGTCCA
AGCTTGCTCTGCTTCAAACAGACCTGGTTCAAGCGGCGCTCAAGCAAACA
TGGCCGGACTATGAATTCAAGATTCACTCCCGAGAGACCGCAGGCGACCA
GAACACGACCATTGCGCTCCGTGACTTTACGACCAAGAACCTGTGGACCC
AGGAACTGGAGGACCTTCTGATCGCTGGCCAGGTTGACTTCATTGTACAC
TCTCTCAAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0018160 | peptidyl-pyrromethane cofactor linkage |
| GO:0033014 | tetrapyrrole biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004418 | hydroxymethylbilane synthase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262YP5 |
| DBxref | InterPro:IPR022419 |
| DBxref | InterPro:IPR022417 |
| DBxref | InterPro:IPR036803 |
| DBxref | InterPro:IPR022418 |
| DBxref | InterPro:IPR000860 |
| DBxref | PFAM:PF03900 |
| DBxref | PFAM:PF01379 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:683096..684619 - |
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