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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:715015..716492+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011461-T1 ID=KJC3_011461-T1|Name=KJC3_011461-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1478bp|location=Sequence derived from alignment at ch8:715015..716492+ (Aspergillus niger KJC3)
AATACCGACCCCACTCACCGCAGATCATGTAATTTTCATCATCGCCCGTC
AGATCATTACATTATCAGTAACCACCAAGGTACAATATCTTCTGCATCTA
CATCTACAGCTTCCACACGCCTCAACCAGCCATTGGCACCCACCTACATA
CCTCGCTCGCCATGCTCCCACCCCCCGATGACCCCGACTCTACCACCGAC
ACAACAATCGCGTCCACCAGATCACCCCTCCCCCTCACCACCGACAATGC
CACCACCACCACCACGAAGAACCAGAACAACCACCACCACCCCCGCAATC
CAAAACCCACGCTCCTCAACCCCCTTCAAAAAGGCATCACGACCTACCTA
ACCCACCACCACACCGATGCAATCCTCCCCCCTTCCTCCCTTCCCAAACG
CTTCACCATCTACGCCCCCCTCCTCCTCCTTCCCGTCAACGCCCTCACGA
CCCCACCCGCCTGGCACACCCTCTACGCCTCCCTAACCGCATCTCAAAGG
ACCACTCTCTACGAATGCATTCTCTCCGCCTTCTCGCGCTACAACCTCAC
CCACATCGCCATCAACGCCCCCATCGCATTAACCGACGCGCAAGGCACCG
AGAACCGCATGCGCAGTCCCGGCGGCTTACTCCCACTACACGGGGATTTT
GGGCCCTCGCCCAGCACAATCCTGAATCTGGATGCGCCAACAGCGGAGGA
CCTGGGGCGTGCGTTGTGGGTGAGTACGGTGCAAAACCATGGCATTGAGC
AGTTTTGGGCACCTATGTATACGATGTTCTCGAGGGGGAATGTTACGGAG
AAGGCAAGGATATTGGATGGCATGGAGGGGTTGCGCAGGGAGAGTATGGA
GGGGCCAGGAATGAGTGTGGTGGATATGTATGCGGGGATTGGATATTTTG
TGTTTTCGTACCTGAGGCAAGGGGTGCGGAGGGTTTGGGGGTGGGAGATT
AATGGCTGGTCCGTGGAGGGGTTGCGGAGGGGGTGTATGGCTAATGGGTG
GGGGTGTAGGGTTGTTAAGGTTGATGGTGATGGGGTATTGGAAGGGGGTA
TAGGGGTGGAGGAGTTGGTGGATGGGTTGAGAGATGAGGATAGAGTGGTG
GTGTTTCATGGGGATAATCGGTTTGCGGCGCGGGTTTTGGCACAGATCAG
GCATGTGATGGAGGCGCGCGGGCGGTGGGCGCCTGTCAGGCATGTTAATT
TGGGCTTGTTGCCCTCGTCGGCGGCTGCTTGGGGGGATGCGTGTCGTATG
GTGGATGGACGGTTGGGGGGTTGGCTGCATGTGCATGAGAATGTGGATGT
GCGGCGCATTGAGGAGATGGGGGATCATATCACGAAGGAGATTGGGAGGT
TAAGGGCCACGGCTTTGGAGGTTGAAGATGTGGTGGCGGAGTGTCGGCAT
GTTGAACAGGTCAAGACTTACGCTCCGGGGGTGATGCATTGCGTGTTTGA
TGTCAAGGTGCCGGCACTGGAGTTATAA back to topCoding sequence (CDS) from alignment at ch8:715015..716492+ >KJC3_011461-T1 ID=KJC3_011461-T1|Name=KJC3_011461-T1|organism=Aspergillus niger KJC3|type=CDS|length=1317bp|location=Sequence derived from alignment at ch8:715015..716492+ (Aspergillus niger KJC3)
ATGCTCCCACCCCCCGATGACCCCGACTCTACCACCGACACAACAATCGC
GTCCACCAGATCACCCCTCCCCCTCACCACCGACAATGCCACCACCACCA
CCACGAAGAACCAGAACAACCACCACCACCCCCGCAATCCAAAACCCACG
CTCCTCAACCCCCTTCAAAAAGGCATCACGACCTACCTAACCCACCACCA
CACCGATGCAATCCTCCCCCCTTCCTCCCTTCCCAAACGCTTCACCATCT
ACGCCCCCCTCCTCCTCCTTCCCGTCAACGCCCTCACGACCCCACCCGCC
TGGCACACCCTCTACGCCTCCCTAACCGCATCTCAAAGGACCACTCTCTA
CGAATGCATTCTCTCCGCCTTCTCGCGCTACAACCTCACCCACATCGCCA
TCAACGCCCCCATCGCATTAACCGACGCGCAAGGCACCGAGAACCGCATG
CGCAGTCCCGGCGGCTTACTCCCACTACACGGGGATTTTGGGCCCTCGCC
CAGCACAATCCTGAATCTGGATGCGCCAACAGCGGAGGACCTGGGGCGTG
CGTTGTGGGTGAGTACGGTGCAAAACCATGGCATTGAGCAGTTTTGGGCA
CCTATGTATACGATGTTCTCGAGGGGGAATGTTACGGAGAAGGCAAGGAT
ATTGGATGGCATGGAGGGGTTGCGCAGGGAGAGTATGGAGGGGCCAGGAA
TGAGTGTGGTGGATATGTATGCGGGGATTGGATATTTTGTGTTTTCGTAC
CTGAGGCAAGGGGTGCGGAGGGTTTGGGGGTGGGAGATTAATGGCTGGTC
CGTGGAGGGGTTGCGGAGGGGGTGTATGGCTAATGGGTGGGGGTGTAGGG
TTGTTAAGGTTGATGGTGATGGGGTATTGGAAGGGGGTATAGGGGTGGAG
GAGTTGGTGGATGGGTTGAGAGATGAGGATAGAGTGGTGGTGTTTCATGG
GGATAATCGGTTTGCGGCGCGGGTTTTGGCACAGATCAGGCATGTGATGG
AGGCGCGCGGGCGGTGGGCGCCTGTCAGGCATGTTAATTTGGGCTTGTTG
CCCTCGTCGGCGGCTGCTTGGGGGGATGCGTGTCGTATGGTGGATGGACG
GTTGGGGGGTTGGCTGCATGTGCATGAGAATGTGGATGTGCGGCGCATTG
AGGAGATGGGGGATCATATCACGAAGGAGATTGGGAGGTTAAGGGCCACG
GCTTTGGAGGTTGAAGATGTGGTGGCGGAGTGTCGGCATGTTGAACAGGT
CAAGACTTACGCTCCGGGGGTGATGCATTGCGTGTTTGATGTCAAGGTGC
CGGCACTGGAGTTATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0031591 | wybutosine biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011461-T1.utr5p1 | KJC3_011461-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR030382 |
| DBxref | InterPro:IPR026274 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:715015..716492 + |
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