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KJC3_011473-T1, KJC3_011473-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011473-T1
Unique NameKJC3_011473-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:747575..749176-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011473-T1 ID=KJC3_011473-T1|Name=KJC3_011473-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1602bp|location=Sequence derived from alignment at ch8:747575..749176- (Aspergillus niger KJC3)
ATGCAGAATTCCCCCAAGAAGCCCGACACCGTCGCAAAGCGGCGCAAGAG
AGTCAAGGCTCCCCGCGATAACAAGAGCAGTGGTTTTGACGAGGTCCTCC
AGACCGACATTGATCAGCTCCTCCGCAGACACAAGCCCGAAACCGAGCTC
GAGACAGAAGACGCTTCCACGCCCCCGCAACCCACCCTCCCCGAGCCTTT
CACCGAAATTGAAGTTCAGGTCGCTGATGTATCATCAACGGGTGATGGTT
TAGCATTGTCCGAGAACCAGGATCATGTCTACGTCGTTCCCTTCACAGTC
CCCGGCGACAAGGTTCTGGTCAAGGTGGTGCGGCACTTCCCCTCTCTGTC
CTACAGCATGACGGACTTCATCAAGGTCATTGAGCCTGGCCCTAAGCGCA
ACGATGCCGGCATTGGTTGCCAGTATTTTGGTCGGTGCTCGGGATGCCAG
CTGCAGATGATGTCCTACGAAGACCAGCTCGCCCACAAGAAGCGCATCGT
GGAGAAGGCCTACGCCAACTTCTCTGGTTTGATTCCAGAGTTGATTCCCG
CCATCGACGACACTTTCCCATCTCCGCTGCAATACGGCTACCGGACAAAG
CTCACGCCGCACTTTGCAGCCCCTGGCGGAAACAAGAGGAGGGGTAAGGG
GCCCCGCGAGCCGCACAAGGAGGTACCTCCGATTGGCTTCACTTTCAAGA
ACCGACGCATGGATTTGGATATCGAAGACTGCCCCTTGGGCACCGACATT
GTCCGACAGGGATTAAAGAGCGAGCGCAAGCGCGTGGCCGAGACCATTGG
CAAGTACACCAAAGGTGCCACCCTTCTCATGCGCGAATCCACCAGCCGCG
TGCCGAAAGAGCAGGACAGCGAGAACCCTCCTGCGCCCATCAACAAGCCC
GGACAGGATTCCGGCGACGTCATCCGCATCGAAAAGGATACCTACATTGA
AGAGAAGCGCTGCGTGACTGACTCGAACGCCACCAGCATCGAATATGTCG
ACGACTACGTCTTCACCAACAAAGCCGGCGCGTTCTTCCAGAACAACAAC
TCCATCCTATCTGGATTCACCGAGTTCATCCGCCAACACGCTATGCCCCC
GAACAACGACCAAGACGCCAAACCCATCAAATACCTTCTGGATGCCTACT
CCGGCTCCGGTCTCTTCACCATCACCCTCTCCCCGCTCTTCAAGTCCAGT
CTGGGCGTCGATGTTGCCGGCGACTCCATCGCCTCGGCGCGGGACAACGC
TCGCGACAACAAGCTCCCTAACACTGGATTCGCCGCCGCAGACGCAGCCA
CGCTTTTCAAGGACGTGCCCTACCCTCCTGACCAGACTCTGCTGGTGATT
GACCCCCCGCGCAAGGGATGCAGTGACGACTTTCTCCGGCAGCTGCTGGC
CTTTGGACCGCGCCGGGTGGTCTACGTCAGCTGCAACGTGCACACACAGG
CGCGCGACGTGGCTGTCATGGTGCAAGGCGATGCGGAGAAGAAGATCCGG
TACGAGATCGAGAGCATCCGGGGATTCGACTTCTTCCCGCAGACGGGACA
TGTTGAAGGAGTTGCTATTCTGAACAAGACGAGTATACCCGAGTCTGCCT
AG
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Coding sequence (CDS) from alignment at ch8:747575..749176-

>KJC3_011473-T1 ID=KJC3_011473-T1|Name=KJC3_011473-T1|organism=Aspergillus niger KJC3|type=CDS|length=1602bp|location=Sequence derived from alignment at ch8:747575..749176- (Aspergillus niger KJC3)
ATGCAGAATTCCCCCAAGAAGCCCGACACCGTCGCAAAGCGGCGCAAGAG
AGTCAAGGCTCCCCGCGATAACAAGAGCAGTGGTTTTGACGAGGTCCTCC
AGACCGACATTGATCAGCTCCTCCGCAGACACAAGCCCGAAACCGAGCTC
GAGACAGAAGACGCTTCCACGCCCCCGCAACCCACCCTCCCCGAGCCTTT
CACCGAAATTGAAGTTCAGGTCGCTGATGTATCATCAACGGGTGATGGTT
TAGCATTGTCCGAGAACCAGGATCATGTCTACGTCGTTCCCTTCACAGTC
CCCGGCGACAAGGTTCTGGTCAAGGTGGTGCGGCACTTCCCCTCTCTGTC
CTACAGCATGACGGACTTCATCAAGGTCATTGAGCCTGGCCCTAAGCGCA
ACGATGCCGGCATTGGTTGCCAGTATTTTGGTCGGTGCTCGGGATGCCAG
CTGCAGATGATGTCCTACGAAGACCAGCTCGCCCACAAGAAGCGCATCGT
GGAGAAGGCCTACGCCAACTTCTCTGGTTTGATTCCAGAGTTGATTCCCG
CCATCGACGACACTTTCCCATCTCCGCTGCAATACGGCTACCGGACAAAG
CTCACGCCGCACTTTGCAGCCCCTGGCGGAAACAAGAGGAGGGGTAAGGG
GCCCCGCGAGCCGCACAAGGAGGTACCTCCGATTGGCTTCACTTTCAAGA
ACCGACGCATGGATTTGGATATCGAAGACTGCCCCTTGGGCACCGACATT
GTCCGACAGGGATTAAAGAGCGAGCGCAAGCGCGTGGCCGAGACCATTGG
CAAGTACACCAAAGGTGCCACCCTTCTCATGCGCGAATCCACCAGCCGCG
TGCCGAAAGAGCAGGACAGCGAGAACCCTCCTGCGCCCATCAACAAGCCC
GGACAGGATTCCGGCGACGTCATCCGCATCGAAAAGGATACCTACATTGA
AGAGAAGCGCTGCGTGACTGACTCGAACGCCACCAGCATCGAATATGTCG
ACGACTACGTCTTCACCAACAAAGCCGGCGCGTTCTTCCAGAACAACAAC
TCCATCCTATCTGGATTCACCGAGTTCATCCGCCAACACGCTATGCCCCC
GAACAACGACCAAGACGCCAAACCCATCAAATACCTTCTGGATGCCTACT
CCGGCTCCGGTCTCTTCACCATCACCCTCTCCCCGCTCTTCAAGTCCAGT
CTGGGCGTCGATGTTGCCGGCGACTCCATCGCCTCGGCGCGGGACAACGC
TCGCGACAACAAGCTCCCTAACACTGGATTCGCCGCCGCAGACGCAGCCA
CGCTTTTCAAGGACGTGCCCTACCCTCCTGACCAGACTCTGCTGGTGATT
GACCCCCCGCGCAAGGGATGCAGTGACGACTTTCTCCGGCAGCTGCTGGC
CTTTGGACCGCGCCGGGTGGTCTACGTCAGCTGCAACGTGCACACACAGG
CGCGCGACGTGGCTGTCATGGTGCAAGGCGATGCGGAGAAGAAGATCCGG
TACGAGATCGAGAGCATCCGGGGATTCGACTTCTTCCCGCAGACGGGACA
TGTTGAAGGAGTTGCTATTCTGAACAAGACGAGTATACCCGAGTCTGCCT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0030697S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity
GO:0008173RNA methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011473KJC3_011473Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011473-T1.cdsKJC3_011473-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011473-T1.exon1KJC3_011473-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011473-T1KJC3_011473-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR025795
DBxrefInterPro:IPR002792
DBxrefInterPro:IPR030391
DBxrefInterPro:IPR030390
DBxrefInterPro:IPR010280
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:747575..749176 -
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