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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:778180..779927- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011486-T1 ID=KJC3_011486-T1|Name=KJC3_011486-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1748bp|location=Sequence derived from alignment at ch8:778180..779927- (Aspergillus niger KJC3)
ACAGTTACTACTCGGAGGGCTATCTATACTGTCTATAAATATTCCAGAGC
GCCCATCTTTTCAAGTCCTCAAACGTTAGCGCGTACGTGATCCTGATTAG
ATATGTCCAGGCGGTCAGTTCCTGCCGTCAGGGGGAAGCTCGCCGCCTTT
GCTCCGGATGTGGGGGTTCGGAGAGGGCCTCGACCGGCAGCGCCTCTCAG
GACATCGTGAAGCTACCCGGACACTCGAATAGATGAAAGACTAGTGATTC
AGAGCCGTTTACTTCGCTTCGGGCTTGCCAAACATGCAGGCCTTCGGTAT
GTTACCCATTCTATATCTCATCAAACAAATCGGGTCACCAGAATAGATGA
CATGTCTTTTGGCAATTGCGCTAATGATGCAACTCTAGTCCCCAAGAACC
GGAGAGTAAGTCGATCATGCTCGATCCATAGAAGTATTGAAGATGCCAAT
GCCAGATGCAGCCCCGGTTTGAGTTAATACTCAGAGTAAGAGTCCGTGGA
TCACATCCCAAATGGCCTCCCAGCTAACTGCTATGATTATTGTAGATTAT
CGACCTCAATAATGTTCCACTCGTGAGCGGTACCGCTTTCGTCAAATGGC
GCCTACCGTCATCTAGTGCGCCTGAACACCATGGACATACAGATAAGGCG
ATCATCATAGACCATCGGGCATATTGGAATTACGAGAAGGTCCTGCAGGT
CAGGCTCACCATCGACCGCAACCAGACTTTACACGAATGCGAGTTGTATT
TCGAAATTATTCAAGAGTTTGCGTCAGGAGGGAACAACGAGAAGAATCTG
CTAGGAAGGATCAGACTCAACCTTTCCGAATATGTGGATAAGAGTGACGA
TGACGAGGGCATCGTCCGGAGATACTTGATGCAGGATAGCAAGATCAACA
GCACACTAAAAGTTGGTATAGCCACACGCCAAGTTGAAGGGGATCGGAAC
TACATTACGTATGTCATATATTATGCCGGAAGACGCTTTACTCCCTTCGA
GGAGCATATTGCTGATGACATTCAGGCCGCCTCTCAAATCAGCCATGGTC
TTTGGCGGAATCGCTGGGGTTGTATCCTCTGAACAAGGCGAACATGACGA
CCTGGGTCGGCTTCCCTCGATCAACACCCAGAGTCGCGAAGTGACAGATA
TGCAAGACATGTACCGCCGCACGCTGGCTGCGTCTTGGAATTCTCGGGCG
GACGATCTACCGGCCGACAAGCTGATCGAAGAACTGTTCTCCGGCGGCAT
TAGCTGGGCAGACGGCCATGATGCCCGTGCCGAGAAATCTATCGAGAGTC
AGGCAGATCGACTGTCACCACATGGGCGCACAAGCGTCAGGCAAGCTTCA
TCAGACAATCGATTGTCTCCTTCCAATTTTGAGAGGCGACCAAGGAGTTC
TTCAAGCAACCATTATCGCAATGATGTGAAAGGCACAGACTTTGCCCCAG
CTGTTGATCATACCCGGAAAGGCGGGAGCATAGAGCAGCAACTGTATGAC
AACCCCAAAGGCAAGGCTTGGAAAAACCGTACTTCGGAGTTTGAACTGTC
GGAGTTCGATGTGCGCGAGGATTTGCGGAGTTGGGAGGTCATGAACAAGG
AGTGATTCAGTATGGTTCTTCGTGGCGTTAAGCAGTCTCTTGTATAATAC
CCCTATGACTTTTACTCATGCCTCTGTTCTTCAAAATGTCTGCTTTCTCA
CTTGTGGCACCAAAATGTCGGGGTAGATAACTGCCCCATGTAAGCGTA back to topCoding sequence (CDS) from alignment at ch8:778180..779927- >KJC3_011486-T1 ID=KJC3_011486-T1|Name=KJC3_011486-T1|organism=Aspergillus niger KJC3|type=CDS|length=5235bp|location=Sequence derived from alignment at ch8:778180..779927- (Aspergillus niger KJC3)
GCCGCCTCTCAAATCAGCCATGGTCTTTGGCGGAATCGCTGGGGTTGTAT
CCTCTGAACAAGGCGAACATGACGACCTGGGTCGGCTTCCCTCGATCAAC
ACCCAGAGTCGCGAAGTGACAGATATGCAAGACATGTACCGCCGCACGCT
GGCTGCGTCTTGGAATTCTCGGGCGGACGATCTACCGGCCGACAAGCTGA
TCGAAGAACTGTTCTCCGGCGGCATTAGCTGGGCAGACGGCCATGATGCC
CGTGCCGAGAAATCTATCGAGAGTCAGGCAGATCGACTGTCACCACATGG
GCGCACAAGCGTCAGGCAAGCTTCATCAGACAATCGATTGTCTCCTTCCA
ATTTTGAGAGGCGACCAAGGAGTTCTTCAAGCAACCATTATCGCAATGAT
GTGAAAGGCACAGACTTTGCCCCAGCTGTTGATCATACCCGGAAAGGCGG
GAGCATAGAGCAGCAACTGTATGACAACCCCAAAGGCAAGGCTTGGAAAA
ACCGTACTTCGGAGTTTGAACTGTCGGAGTTCGATGTGCGCGAGGATTTG
CGGAGTTGGGAGGTCATGAACAAGGAGTGAATTATCGACCTCAATAATGT
TCCACTCGTGAGCGGTACCGCTTTCGTCAAATGGCGCCTACCGTCATCTA
GTGCGCCTGAACACCATGGACATACAGATAAGGCGATCATCATAGACCAT
CGGGCATATTGGAATTACGAGAAGGTCCTGCAGGTCAGGCTCACCATCGA
CCGCAACCAGACTTTACACGAATGCGAGTTGTATTTCGAAATTATTCAAG
AGTTTGCGTCAGGAGGGAACAACGAGAAGAATCTGCTAGGAAGGATCAGA
CTCAACCTTTCCGAATATGTGGATAAGAGTGACGATGACGAGGGCATCGT
CCGGAGATACTTGATGCAGGATAGCAAGATCAACAGCACACTAAAAGTTG
GTATAGCCACACGCCAAGTTGAAGGGGATCGGAACTACATTACCCCCGGT
TTGAGTTAATACTCAGATCCCCAAGAACCGGAGAATGCAGGCCTTCGGCC
GCCTCTCAAATCAGCCATGGTCTTTGGCGGAATCGCTGGGGTTGTATCCT
CTGAACAAGGCGAACATGACGACCTGGGTCGGCTTCCCTCGATCAACACC
CAGAGTCGCGAAGTGACAGATATGCAAGACATGTACCGCCGCACGCTGGC
TGCGTCTTGGAATTCTCGGGCGGACGATCTACCGGCCGACAAGCTGATCG
AAGAACTGTTCTCCGGCGGCATTAGCTGGGCAGACGGCCATGATGCCCGT
GCCGAGAAATCTATCGAGAGTCAGGCAGATCGACTGTCACCACATGGGCG
CACAAGCGTCAGGCAAGCTTCATCAGACAATCGATTGTCTCCTTCCAATT
TTGAGAGGCGACCAAGGAGTTCTTCAAGCAACCATTATCGCAATGATGTG
AAAGGCACAGACTTTGCCCCAGCTGTTGATCATACCCGGAAAGGCGGGAG
CATAGAGCAGCAACTGTATGACAACCCCAAAGGCAAGGCTTGGAAAAACC
GTACTTCGGAGTTTGAACTGTCGGAGTTCGATGTGCGCGAGGATTTGCGG
AGTTGGGAGGTCATGAACAAGGAGTGAATTATCGACCTCAATAATGTTCC
ACTCGTGAGCGGTACCGCTTTCGTCAAATGGCGCCTACCGTCATCTAGTG
CGCCTGAACACCATGGACATACAGATAAGGCGATCATCATAGACCATCGG
GCATATTGGAATTACGAGAAGGTCCTGCAGGTCAGGCTCACCATCGACCG
CAACCAGACTTTACACGAATGCGAGTTGTATTTCGAAATTATTCAAGAGT
TTGCGTCAGGAGGGAACAACGAGAAGAATCTGCTAGGAAGGATCAGACTC
AACCTTTCCGAATATGTGGATAAGAGTGACGATGACGAGGGCATCGTCCG
GAGATACTTGATGCAGGATAGCAAGATCAACAGCACACTAAAAGTTGGTA
TAGCCACACGCCAAGTTGAAGGGGATCGGAACTACATTACCCCCGGTTTG
AGTTAATACTCAGATCCCCAAGAACCGGAGAATGCAGGCCTTCGGCCGCC
TCTCAAATCAGCCATGGTCTTTGGCGGAATCGCTGGGGTTGTATCCTCTG
AACAAGGCGAACATGACGACCTGGGTCGGCTTCCCTCGATCAACACCCAG
AGTCGCGAAGTGACAGATATGCAAGACATGTACCGCCGCACGCTGGCTGC
GTCTTGGAATTCTCGGGCGGACGATCTACCGGCCGACAAGCTGATCGAAG
AACTGTTCTCCGGCGGCATTAGCTGGGCAGACGGCCATGATGCCCGTGCC
GAGAAATCTATCGAGAGTCAGGCAGATCGACTGTCACCACATGGGCGCAC
AAGCGTCAGGCAAGCTTCATCAGACAATCGATTGTCTCCTTCCAATTTTG
AGAGGCGACCAAGGAGTTCTTCAAGCAACCATTATCGCAATGATGTGAAA
GGCACAGACTTTGCCCCAGCTGTTGATCATACCCGGAAAGGCGGGAGCAT
AGAGCAGCAACTGTATGACAACCCCAAAGGCAAGGCTTGGAAAAACCGTA
CTTCGGAGTTTGAACTGTCGGAGTTCGATGTGCGCGAGGATTTGCGGAGT
TGGGAGGTCATGAACAAGGAGTGAATTATCGACCTCAATAATGTTCCACT
CGTGAGCGGTACCGCTTTCGTCAAATGGCGCCTACCGTCATCTAGTGCGC
CTGAACACCATGGACATACAGATAAGGCGATCATCATAGACCATCGGGCA
TATTGGAATTACGAGAAGGTCCTGCAGGTCAGGCTCACCATCGACCGCAA
CCAGACTTTACACGAATGCGAGTTGTATTTCGAAATTATTCAAGAGTTTG
CGTCAGGAGGGAACAACGAGAAGAATCTGCTAGGAAGGATCAGACTCAAC
CTTTCCGAATATGTGGATAAGAGTGACGATGACGAGGGCATCGTCCGGAG
ATACTTGATGCAGGATAGCAAGATCAACAGCACACTAAAAGTTGGTATAG
CCACACGCCAAGTTGAAGGGGATCGGAACTACATTACCCCCGGTTTGAGT
TAATACTCAGATCCCCAAGAACCGGAGAATGCAGGCCTTCGGCCGCCTCT
CAAATCAGCCATGGTCTTTGGCGGAATCGCTGGGGTTGTATCCTCTGAAC
AAGGCGAACATGACGACCTGGGTCGGCTTCCCTCGATCAACACCCAGAGT
CGCGAAGTGACAGATATGCAAGACATGTACCGCCGCACGCTGGCTGCGTC
TTGGAATTCTCGGGCGGACGATCTACCGGCCGACAAGCTGATCGAAGAAC
TGTTCTCCGGCGGCATTAGCTGGGCAGACGGCCATGATGCCCGTGCCGAG
AAATCTATCGAGAGTCAGGCAGATCGACTGTCACCACATGGGCGCACAAG
CGTCAGGCAAGCTTCATCAGACAATCGATTGTCTCCTTCCAATTTTGAGA
GGCGACCAAGGAGTTCTTCAAGCAACCATTATCGCAATGATGTGAAAGGC
ACAGACTTTGCCCCAGCTGTTGATCATACCCGGAAAGGCGGGAGCATAGA
GCAGCAACTGTATGACAACCCCAAAGGCAAGGCTTGGAAAAACCGTACTT
CGGAGTTTGAACTGTCGGAGTTCGATGTGCGCGAGGATTTGCGGAGTTGG
GAGGTCATGAACAAGGAGTGAATTATCGACCTCAATAATGTTCCACTCGT
GAGCGGTACCGCTTTCGTCAAATGGCGCCTACCGTCATCTAGTGCGCCTG
AACACCATGGACATACAGATAAGGCGATCATCATAGACCATCGGGCATAT
TGGAATTACGAGAAGGTCCTGCAGGTCAGGCTCACCATCGACCGCAACCA
GACTTTACACGAATGCGAGTTGTATTTCGAAATTATTCAAGAGTTTGCGT
CAGGAGGGAACAACGAGAAGAATCTGCTAGGAAGGATCAGACTCAACCTT
TCCGAATATGTGGATAAGAGTGACGATGACGAGGGCATCGTCCGGAGATA
CTTGATGCAGGATAGCAAGATCAACAGCACACTAAAAGTTGGTATAGCCA
CACGCCAAGTTGAAGGGGATCGGAACTACATTACCCCCGGTTTGAGTTAA
TACTCAGATCCCCAAGAACCGGAGAATGCAGGCCTTCGGCCGCCTCTCAA
ATCAGCCATGGTCTTTGGCGGAATCGCTGGGGTTGTATCCTCTGAACAAG
GCGAACATGACGACCTGGGTCGGCTTCCCTCGATCAACACCCAGAGTCGC
GAAGTGACAGATATGCAAGACATGTACCGCCGCACGCTGGCTGCGTCTTG
GAATTCTCGGGCGGACGATCTACCGGCCGACAAGCTGATCGAAGAACTGT
TCTCCGGCGGCATTAGCTGGGCAGACGGCCATGATGCCCGTGCCGAGAAA
TCTATCGAGAGTCAGGCAGATCGACTGTCACCACATGGGCGCACAAGCGT
CAGGCAAGCTTCATCAGACAATCGATTGTCTCCTTCCAATTTTGAGAGGC
GACCAAGGAGTTCTTCAAGCAACCATTATCGCAATGATGTGAAAGGCACA
GACTTTGCCCCAGCTGTTGATCATACCCGGAAAGGCGGGAGCATAGAGCA
GCAACTGTATGACAACCCCAAAGGCAAGGCTTGGAAAAACCGTACTTCGG
AGTTTGAACTGTCGGAGTTCGATGTGCGCGAGGATTTGCGGAGTTGGGAG
GTCATGAACAAGGAGTGAATTATCGACCTCAATAATGTTCCACTCGTGAG
CGGTACCGCTTTCGTCAAATGGCGCCTACCGTCATCTAGTGCGCCTGAAC
ACCATGGACATACAGATAAGGCGATCATCATAGACCATCGGGCATATTGG
AATTACGAGAAGGTCCTGCAGGTCAGGCTCACCATCGACCGCAACCAGAC
TTTACACGAATGCGAGTTGTATTTCGAAATTATTCAAGAGTTTGCGTCAG
GAGGGAACAACGAGAAGAATCTGCTAGGAAGGATCAGACTCAACCTTTCC
GAATATGTGGATAAGAGTGACGATGACGAGGGCATCGTCCGGAGATACTT
GATGCAGGATAGCAAGATCAACAGCACACTAAAAGTTGGTATAGCCACAC
GCCAAGTTGAAGGGGATCGGAACTACATTACCCCCGGTTTGAGTTAATAC
TCAGATCCCCAAGAACCGGAGAATGCAGGCCTTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011486-T1.utr3p1 | KJC3_011486-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011486-T1.utr5p1 | KJC3_011486-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019448 |
| DBxref | PFAM:PF10358 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:778180..779927 - |
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