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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:788022..788922+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011489-T1 ID=KJC3_011489-T1|Name=KJC3_011489-T1|organism=Aspergillus niger KJC3|type=mRNA|length=901bp|location=Sequence derived from alignment at ch8:788022..788922+ (Aspergillus niger KJC3)
AATGGCTTCAGCTGTTCAGCTACTCAGCCGTACAGTTCACAACAATCCCG
CCGCTCCAGTCCGTCCATGTCCGATAAATCGGAGGGCCTGAGCGAAGTGG
GGTAAAACATGACTTGATTCGATGAATATGAGATCAGTGACGAGTTCAGC
ATGTTGATACTATAAAAACCATCGATCTCCCTCCCGTCACGACCTACTAA
CTCGTCCCCTATTAAGACCGTGACTACTAGGAAATCAACTAACTAGCACC
ACTCCTTCACGCTATCCTTCCCTCGGAATCAAATCCTTATCAATAACTTT
CTGCATCATGGCTGTCACTGCTATCGAAAGGTATGACCTCTAGAAACTTT
ACAACCATCTCCTAATCTCATTTCCAAAAGAAAAACAAAAGTGGGTAACT
GACCAATCTCCTCCTGTTCTTCTCTACTAGTATCTCCGACTTCCTCACCC
TCATCAACTCGGGAGATGTGGTGATCATCGACTTCTGGGCTACATGGTGT
GGTCCTTGCAAAATGATTAGTCCTTTCTTTGAACAGCTGGCCTCCCGGCC
CGAGTTCAGCGCCATCAAGTTCGCCAAGGTCGACGTCGATACACAGGAGG
ATATTTCTCAAGAATGTGGAATTAGAGCCATGCCGACCTTTATAGTATTC
AAAGATGGCCAAAAGCTGGACGATATGGCGGGGGCTCACCCCGGTGGCCT
GCAAGGTCTTGTTCAGAAGTATGCGTGAAGTTGGTAAGCCATATATAGTT
ACTCTATGTGGTTGGTCATGGGGGATTTGAACCAAGTGATATGCGGATTG
CTGTTTTATATTACTATCTACAAGTGTCTTGAATCACTCTGGTGATTTGC
TCTGTCATTCGATATTGTTGACATTACAAATTCGATTCTCTGTAGCTGAG
A back to topCoding sequence (CDS) from alignment at ch8:788022..788922+ >KJC3_011489-T1 ID=KJC3_011489-T1|Name=KJC3_011489-T1|organism=Aspergillus niger KJC3|type=CDS|length=642bp|location=Sequence derived from alignment at ch8:788022..788922+ (Aspergillus niger KJC3)
ATGGCTGTCACTGCTATCGAAAGTATCTCCGACTTCCTCACCCTCATCAA
CTCGGGAGATGTGGTGATCATCGACTTCTGGGCTACATGGTGTGGTCCTT
GCAAAATGATTAGTCCTTTCTTTGAACAGCTGGCCTCCCGGCCCGAGTTC
AGCGCCATCAAGTTCGCCAAGGTCGACGTCGATACACAGGAGGATATTTC
TCAAGAATGTGGAATTAGAGCCATGCCGACCTTTATAGTATTCAAAGATG
GCCAAAAGCTGGACGATATGGCGGGGGCTCACCCCGGTGGCCTGCAAGGT
CTTGTTCAGAAGTATGCGTGAATGGCTGTCACTGCTATCGAAAGTATCTC
CGACTTCCTCACCCTCATCAACTCGGGAGATGTGGTGATCATCGACTTCT
GGGCTACATGGTGTGGTCCTTGCAAAATGATTAGTCCTTTCTTTGAACAG
CTGGCCTCCCGGCCCGAGTTCAGCGCCATCAAGTTCGCCAAGGTCGACGT
CGATACACAGGAGGATATTTCTCAAGAATGTGGAATTAGAGCCATGCCGA
CCTTTATAGTATTCAAAGATGGCCAAAAGCTGGACGATATGGCGGGGGCT
CACCCCGGTGGCCTGCAAGGTCTTGTTCAGAAGTATGCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015035 | protein disulfide oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006662 | glycerol ether metabolic process |
| GO:0045454 | cell redox homeostasis |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011489-T1.utr5p1 | KJC3_011489-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011489-T1.utr3p1 | KJC3_011489-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017937 |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR013766 |
| DBxref | InterPro:IPR005746 |
| DBxref | PFAM:PF13098 |
| DBxref | PFAM:PF00085 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:788022..788922 + |
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