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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:803367..805045+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011494-T1 ID=KJC3_011494-T1|Name=KJC3_011494-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1679bp|location=Sequence derived from alignment at ch8:803367..805045+ (Aspergillus niger KJC3)
ATCATAATGGAACGACAAAAAGGAGGGGATGTCGGGGATGGTGCTGCACT
TGCGGAGAGAATTGCCAGACTCGTGCACGCTCACTTTGATGGTTTGCCGG
CACGCAGTAAACCTATTCTACGGGATGATGGGACGAGGGAGTGGATTCCT
ATGTGTGGGGTTGTGGTGGTGAGGGGTGTGTATATCCTTTCTTTACACTA
TCTAAGGAATATATGGAGAGGGACTATGGTTGGGTGTATACTGGCTTACG
ATATGTTGGTGTAGATGTATCTGAGGCAAACGGGGAGGAAGAGTATGAGG
GAGGAAAAGAAGAATTAACCTGTGTGGCTGTTACGTATGTACACCAACCA
ACTATCTGCCCTATATAATCACAGATGTATCAAGTAAATACTAAAGCATC
CAGCTCCGGCGCGAAGTGCCTCCCTACCACGCAACTGCCAACCAGCACCG
GTCTGGTCCTCCACGACTGGCACGCCGAGATCCTGGCCCTCCGCGCATTC
AATTACTGGCTGTTGAGTGAGATCCGCGCATTGATAGATCATGAGAATCA
ACAATCTTCATCACCTTCTACACCCAAGCCCTCACCCTTCATTCGCCGCC
GCCATGCCCCCAACAACAACCCACCCTTCGAACTCGACCCCTCCCTAAAG
ATCTACCTCTACTGCACCACCGCCCCCTGCGGCGACGCAAGCATGGAACT
CACCATGGCAGCGCAAGACGACCCCACTCCATGGGAGCTATCCCCCTCAG
AAGAAGAAGAGGCCGGTCTCCTCTCCGGCCGCGCCAACTTCTCCCAGTTA
GGTATTGTCCGCCGCAAGCCCGCGCGTGCAGACGCCCCATCCACGAAAAG
CAAGTCCTGCTCGGACAAGCTTGCCCTGCGGCAGGTGTCGTCTCTCTTGT
CCAGGGGTATGAGTCTGCTGGTGGCTGTCACGGAGAATGCGTATCTGGCG
GGGGTAGTGATGCCGCGCGAGGAGGTGAGTGAGACGGGGTGTGTGAGGGC
TTGGGGGGTGGATGGGAGAATGGGGCCTTTATTATTGAGGTTTGAAGAAG
GAGGAGGGGATGGGTACGGGTATCATCCGTTTAAGGTTCTCTCTGTCGAT
ACGGAGGTCGTGGAGGAGTTGTGGGCGTTTGGCAAACCGAAGAGCAAGGA
GGCCGGGATGAAGTGTAAGCCGGGGAATATCTCGGCTGTTTGGACGGCTG
CGCCGGTTCTTGGGGGTGCTTCTGGTGGTGGGGTGGATCGCTATGCGGCG
GAGAATGGGGCGAAACAGTTGGCTAAATTGAGTGGTTCGTGGACTGGGTT
GTATGAGACGATCATTGGTGGTATGAAGCAGGGGTATAAGGCGTCGGTGC
CGGTGGGGAAGGGCGCGTCGGCGCTGTCGAGGGCGAAGATGTGGGGGGCG
TTGAGGGGGTTGTTGGATGGTGGTGATGGTGATGGTTCTGCGGGAGAGGG
ACAGCAGGTGGTTAGGGCAGCATCGTATAAGGACTTCAAGAGGGCTGCGC
TGGAGACGCCTGCAGGCAAGGCGCGAGAGCGGGCTATGTTGGAGGCGAAG
AAGGTGCTGGTGCCGTGGGTGCCGAATGATGGGGATGATGAATGGGGCTT
AGAGGTGCTGGTGGACCATAAAGGGAAGAAGAGAAAGCGTGATGACATTA
TAAAGAATAAAGATGTCCAATCTAGCTAA back to topCoding sequence (CDS) from alignment at ch8:803367..805045+ >KJC3_011494-T1 ID=KJC3_011494-T1|Name=KJC3_011494-T1|organism=Aspergillus niger KJC3|type=CDS|length=4545bp|location=Sequence derived from alignment at ch8:803367..805045+ (Aspergillus niger KJC3)
ATGGAACGACAAAAAGGAGGGGATGTCGGGGATGGTGCTGCACTTGCGGA
GAGAATTGCCAGACTCGTGCACGCTCACTTTGATGGTTTGCCGGCACGCA
GTAAACCTATTCTACGGGATGATGGGACGAGGGAGTGGATTCCTATGTGT
GGGGTTGTGGTGGTGAGGGATGTATCTGAGGCAAACGGGGAGGAAGAGTA
TGAGGGAGGAAAAGAAGAATTAACCTGTGTGGCTGTTACCTCCGGCGCGA
AGTGCCTCCCTACCACGCAACTGCCAACCAGCACCGGTCTGGTCCTCCAC
GACTGGCACGCCGAGATCCTGGCCCTCCGCGCATTCAATTACTGGCTGTT
GAGTGAGATCCGCGCATTGATAGATCATGAGAATCAACAATCTTCATCAC
CTTCTACACCCAAGCCCTCACCCTTCATTCGCCGCCGCCATGCCCCCAAC
AACAACCCACCCTTCGAACTCGACCCCTCCCTAAAGATCTACCTCTACTG
CACCACCGCCCCCTGCGGCGACGCAAGCATGGAACTCACCATGGCAGCGC
AAGACGACCCCACTCCATGGGAGCTATCCCCCTCAGAAGAAGAAGAGGCC
GGTCTCCTCTCCGGCCGCGCCAACTTCTCCCAGTTAGGTATTGTCCGCCG
CAAGCCCGCGCGTGCAGACGCCCCATCCACGAAAAGCAAGTCCTGCTCGG
ACAAGCTTGCCCTGCGGCAGGTGTCGTCTCTCTTGTCCAGGGGTATGAGT
CTGCTGGTGGCTGTCACGGAGAATGCGTATCTGGCGGGGGTAGTGATGCC
GCGCGAGGAGGTGAGTGAGACGGGGTGTGTGAGGGCTTGGGGGGTGGATG
GGAGAATGGGGCCTTTATTATTGAGGTTTGAAGAAGGAGGAGGGGATGGG
TACGGGTATCATCCGTTTAAGGTTCTCTCTGTCGATACGGAGGTCGTGGA
GGAGTTGTGGGCGTTTGGCAAACCGAAGAGCAAGGAGGCCGGGATGAAGT
GTAAGCCGGGGAATATCTCGGCTGTTTGGACGGCTGCGCCGGTTCTTGGG
GGTGCTTCTGGTGGTGGGGTGGATCGCTATGCGGCGGAGAATGGGGCGAA
ACAGTTGGCTAAATTGAGTGGTTCGTGGACTGGGTTGTATGAGACGATCA
TTGGTGGTATGAAGCAGGGGTATAAGGCGTCGGTGCCGGTGGGGAAGGGC
GCGTCGGCGCTGTCGAGGGCGAAGATGTGGGGGGCGTTGAGGGGGTTGTT
GGATGGTGGTGATGGTGATGGTTCTGCGGGAGAGGGACAGCAGGTGGTTA
GGGCAGCATCGTATAAGGACTTCAAGAGGGCTGCGCTGGAGACGCCTGCA
GGCAAGGCGCGAGAGCGGGCTATGTTGGAGGCGAAGAAGGTGCTGGTGCC
GTGGGTGCCGAATGATGGGGATGATGAATGGGGCTTAGAGGTGCTGGTGG
ACCATAAAGGGAAGAAGAGAAAGCGTGATGACATTATAAAGAATAAAGAT
GTCCAATCTAGCTAAATGGAACGACAAAAAGGAGGGGATGTCGGGGATGG
TGCTGCACTTGCGGAGAGAATTGCCAGACTCGTGCACGCTCACTTTGATG
GTTTGCCGGCACGCAGTAAACCTATTCTACGGGATGATGGGACGAGGGAG
TGGATTCCTATGTGTGGGGTTGTGGTGGTGAGGGATGTATCTGAGGCAAA
CGGGGAGGAAGAGTATGAGGGAGGAAAAGAAGAATTAACCTGTGTGGCTG
TTACCTCCGGCGCGAAGTGCCTCCCTACCACGCAACTGCCAACCAGCACC
GGTCTGGTCCTCCACGACTGGCACGCCGAGATCCTGGCCCTCCGCGCATT
CAATTACTGGCTGTTGAGTGAGATCCGCGCATTGATAGATCATGAGAATC
AACAATCTTCATCACCTTCTACACCCAAGCCCTCACCCTTCATTCGCCGC
CGCCATGCCCCCAACAACAACCCACCCTTCGAACTCGACCCCTCCCTAAA
GATCTACCTCTACTGCACCACCGCCCCCTGCGGCGACGCAAGCATGGAAC
TCACCATGGCAGCGCAAGACGACCCCACTCCATGGGAGCTATCCCCCTCA
GAAGAAGAAGAGGCCGGTCTCCTCTCCGGCCGCGCCAACTTCTCCCAGTT
AGGTATTGTCCGCCGCAAGCCCGCGCGTGCAGACGCCCCATCCACGAAAA
GCAAGTCCTGCTCGGACAAGCTTGCCCTGCGGCAGGTGTCGTCTCTCTTG
TCCAGGGGTATGAGTCTGCTGGTGGCTGTCACGGAGAATGCGTATCTGGC
GGGGGTAGTGATGCCGCGCGAGGAGGTGAGTGAGACGGGGTGTGTGAGGG
CTTGGGGGGTGGATGGGAGAATGGGGCCTTTATTATTGAGGTTTGAAGAA
GGAGGAGGGGATGGGTACGGGTATCATCCGTTTAAGGTTCTCTCTGTCGA
TACGGAGGTCGTGGAGGAGTTGTGGGCGTTTGGCAAACCGAAGAGCAAGG
AGGCCGGGATGAAGTGTAAGCCGGGGAATATCTCGGCTGTTTGGACGGCT
GCGCCGGTTCTTGGGGGTGCTTCTGGTGGTGGGGTGGATCGCTATGCGGC
GGAGAATGGGGCGAAACAGTTGGCTAAATTGAGTGGTTCGTGGACTGGGT
TGTATGAGACGATCATTGGTGGTATGAAGCAGGGGTATAAGGCGTCGGTG
CCGGTGGGGAAGGGCGCGTCGGCGCTGTCGAGGGCGAAGATGTGGGGGGC
GTTGAGGGGGTTGTTGGATGGTGGTGATGGTGATGGTTCTGCGGGAGAGG
GACAGCAGGTGGTTAGGGCAGCATCGTATAAGGACTTCAAGAGGGCTGCG
CTGGAGACGCCTGCAGGCAAGGCGCGAGAGCGGGCTATGTTGGAGGCGAA
GAAGGTGCTGGTGCCGTGGGTGCCGAATGATGGGGATGATGAATGGGGCT
TAGAGGTGCTGGTGGACCATAAAGGGAAGAAGAGAAAGCGTGATGACATT
ATAAAGAATAAAGATGTCCAATCTAGCTAAATGGAACGACAAAAAGGAGG
GGATGTCGGGGATGGTGCTGCACTTGCGGAGAGAATTGCCAGACTCGTGC
ACGCTCACTTTGATGGTTTGCCGGCACGCAGTAAACCTATTCTACGGGAT
GATGGGACGAGGGAGTGGATTCCTATGTGTGGGGTTGTGGTGGTGAGGGA
TGTATCTGAGGCAAACGGGGAGGAAGAGTATGAGGGAGGAAAAGAAGAAT
TAACCTGTGTGGCTGTTACCTCCGGCGCGAAGTGCCTCCCTACCACGCAA
CTGCCAACCAGCACCGGTCTGGTCCTCCACGACTGGCACGCCGAGATCCT
GGCCCTCCGCGCATTCAATTACTGGCTGTTGAGTGAGATCCGCGCATTGA
TAGATCATGAGAATCAACAATCTTCATCACCTTCTACACCCAAGCCCTCA
CCCTTCATTCGCCGCCGCCATGCCCCCAACAACAACCCACCCTTCGAACT
CGACCCCTCCCTAAAGATCTACCTCTACTGCACCACCGCCCCCTGCGGCG
ACGCAAGCATGGAACTCACCATGGCAGCGCAAGACGACCCCACTCCATGG
GAGCTATCCCCCTCAGAAGAAGAAGAGGCCGGTCTCCTCTCCGGCCGCGC
CAACTTCTCCCAGTTAGGTATTGTCCGCCGCAAGCCCGCGCGTGCAGACG
CCCCATCCACGAAAAGCAAGTCCTGCTCGGACAAGCTTGCCCTGCGGCAG
GTGTCGTCTCTCTTGTCCAGGGGTATGAGTCTGCTGGTGGCTGTCACGGA
GAATGCGTATCTGGCGGGGGTAGTGATGCCGCGCGAGGAGGTGAGTGAGA
CGGGGTGTGTGAGGGCTTGGGGGGTGGATGGGAGAATGGGGCCTTTATTA
TTGAGGTTTGAAGAAGGAGGAGGGGATGGGTACGGGTATCATCCGTTTAA
GGTTCTCTCTGTCGATACGGAGGTCGTGGAGGAGTTGTGGGCGTTTGGCA
AACCGAAGAGCAAGGAGGCCGGGATGAAGTGTAAGCCGGGGAATATCTCG
GCTGTTTGGACGGCTGCGCCGGTTCTTGGGGGTGCTTCTGGTGGTGGGGT
GGATCGCTATGCGGCGGAGAATGGGGCGAAACAGTTGGCTAAATTGAGTG
GTTCGTGGACTGGGTTGTATGAGACGATCATTGGTGGTATGAAGCAGGGG
TATAAGGCGTCGGTGCCGGTGGGGAAGGGCGCGTCGGCGCTGTCGAGGGC
GAAGATGTGGGGGGCGTTGAGGGGGTTGTTGGATGGTGGTGATGGTGATG
GTTCTGCGGGAGAGGGACAGCAGGTGGTTAGGGCAGCATCGTATAAGGAC
TTCAAGAGGGCTGCGCTGGAGACGCCTGCAGGCAAGGCGCGAGAGCGGGC
TATGTTGGAGGCGAAGAAGGTGCTGGTGCCGTGGGTGCCGAATGATGGGG
ATGATGAATGGGGCTTAGAGGTGCTGGTGGACCATAAAGGGAAGAAGAGA
AAGCGTGATGACATTATAAAGAATAAAGATGTCCAATCTAGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0004000 | adenosine deaminase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011494-T1.utr5p1 | KJC3_011494-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263CG2 |
| DBxref | InterPro:IPR002466 |
| DBxref | PFAM:PF02137 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:803367..805045 + |
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