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KJC3_011513-T1, KJC3_011513-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011513-T1
Unique NameKJC3_011513-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:847479..850198+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011513-T1 ID=KJC3_011513-T1|Name=KJC3_011513-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2720bp|location=Sequence derived from alignment at ch8:847479..850198+ (Aspergillus niger KJC3)
CTCCTTCCACTGCCACATCAGCCAGGTTACACACACAGAATATCCCACCG
CTTCAGCGGGTGAGCTTTATAGTATATACATAGTATATCTCATTTAACGC
TGGTCGCCAGGGATCCGTTAGCGTTGCTGCGAGGATCACACAAACGGAGT
CGATCCTGATTAGGCGTTCCTCTTGCCGCCAGCCGATCTCTCATCCCACG
TCGCCTGTCTTCTCCGTCTTCTTTCTCCTCCCTCGCAATCATCGTGTCAC
CTATTATTATTGTTCCACCAGGTATGTGCTCTCACTGACGATTGCTGAGC
TATCTGACCTCCTATCTCGATCTAGACGCGCTGGATTCCAGCGCCTGCCT
TGTCGTCTGATCATGTCGCCTCGATCGCAAATGCGCCTCCACTAGCCATC
AACAAGCGATATATATATTATATAAACACCTATCGAAGCCTAATTTATTC
TTAACGACCGCCTACCATGGACGAGGGACCTCCTCCACCCCCTCCCCCTC
ACGGCGAGAAGCCACAAACCACCCAGGGCGAATATCGCAAGACTTCCGAC
CTCCCTCCTGGCAACTACGACATCTTTATCATCCCCCCTCACTCCGCCGG
CTCCGGATTCCTCTACCTCCCTTCCCTCCAGCCACAACGCAATAGCTTCA
TCGCGGGGTCCGCCTGCACACTCTTTGTTGTCCTACTTTGGACCCTCCTA
TCACCCCTTCTAAAAGCCTGGTACGCTGCCACCGTCGCCAGTGGCAGCGG
CATGGCCATCGCCGTGCTGGCTATCGGAGTTGGGGTCGCCGGGTGGGCCG
TGGGCGCCTCACAATCAGATTCTGGGGGAGGCCGACGACGGGCCAATTTT
GGATTTAGCACCGGCGGGGGTCCAGGCGCGGGTGGACCCTCCGGCAATGG
CGCCGGAGGTGAGTATGCGCGGGGACAGCAGTATGGGGCCCAAAATCAGG
GCCCGAACGGTCACAATGGTGGACAGGGACAGGGACAGGGACAGCAGCAA
TATGGGGGCAACTTCAACTCGGGTCCGCCTCCGGGTGCAGGCCAGTATGG
CGGGAACCATCAATACCAGAACACTGGTGGGCCCGGAAGTGGACCACCCC
CGCAACCGCCGCCGCAGGCAGGCGGATCAAATAAGACAGGTTCGTCTGCC
ACCGGCTCTGAAAGCAAACCTCAAAGTGGAGCTGATTGGGAGAAGGCCCG
TGAAGAGACCCGGCGCAAGGAGGAGCTGCGCCGCAAGATGGAGGAGTTTA
AGCGAAAGCGGGAAGCCGAGCAGCGCGAGAAGCAGCAGAAGCGCGAGCGC
GAGGCCATGGAGCGGGAGCTGCGGGAGCGCAGAGAGCAGCTCGAGAAGGA
GATGGCTGCCGCCAAGGAGGCGGCCGCCCGTGAGGCCCGAGAACGGGCGG
AGCGCGAAGCAGCCGAAGCCAAAGCCAAAGCGGAGCGAGAGGCCGCGGAA
GCTCGAGCCAAGGCGGAACGAGAAGCAGCGGAAGCGCGTGCCAAGGCGGA
GCGTGAAGCTGCGGAGGCCAAAGCTAAAGCGGAGAAAGAGGCCCGAGAGG
CCCGCGAGCGAGAAGCACGTCGGGCAAAAGAAGCCCGAGAACGAGAGGCG
CGACGCGCCGCCGAAGCCAAGGCCCGTGCTGAGCGCGAGGCCGCGGAGGC
CAAGGCTAAAGCAGAGCGTGAAGCTGCTGAGGCAAAGGCCAAGGCAGAGA
AGGAGGAAGAGGAGCGTAAAGCTGCAGCTAAGAAGGAAGCTGATGCTAAG
TTCGCGGCGCTCAAAGAGGCTGCCGCGAAGAAGTATGCCGAGAAGAAAGC
CAAAGATGCGCAGGAGGCAGCGGCCAAAGAAGCGGCCAGCCAAAAGGCAT
CTAGCACGTCCACTCCCCGCACTCCATCACCCAAGAAACCTGCTTATTCC
CGCACCGATACCGACAGCTCATATTCCAATTTTCGACCGACTGACCGTCC
CCGCCGGCCGTACGGCGGCGCCACCTCTGGGTCATCAGTGTACTCGGACT
CTTCATACGCGCCGTCACAGACAACAGCACGCACGACCCCACCACCATCA
AATCGCGGGGCCTATGAAACCAAAGATCCTGACAAGATTGTCATCAAGGG
CGTGTTCGAGTTCAACAACAACTTTGTGCGCAGCCCTGTGGCGCAACTTG
TCTCAGGCCAGGGCATGGTCAGCGACGGATTGGTTCTGAGGATCACGACA
GAAGGCCTCTTCATCGACGACGACGTGCGCGGTGTCGGTCAGCGGGAATG
GGATGTGAAGGCGTGGACGATGAACCTCGTTGAGGTATGGTGTCCGAAAT
TCGGGGCGCAGCGCCAACCACCGAAGCCCCCGCCGGGGCCATTCAATCGG
CGCGGGAATGAACCGACCCCAGAGGAATCGGAAGCATTCCTCGGCAACCT
GCTCAAGATGTGCAAGAACACGTGCCGATTATCAACAGGCGGAGGAGAGG
ATCAGCGCACGCTGCATGTGTTGCGGGCGTCGGTGCGTGACCACGAGGGC
AAACGGTATGTGTTTGTGTTGCAGGAGACGGAGGGGTGGAAGGTGGCGAT
TGGATTGCAGCGGTTGCGACGGGGGACGTTGTCGCGGGCATTAGGGGTGA
TGGGGTTGGGAGTGAATGAGAGTCGGATGATATTATCAGGATTAGGATAT
GAGTGATGATACCTTATGTATATACCAGCCAGTCAGTCTTTAGCACATAA
TTATCAAACTTTCCAGTTTA
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Coding sequence (CDS) from alignment at ch8:847479..850198+

>KJC3_011513-T1 ID=KJC3_011513-T1|Name=KJC3_011513-T1|organism=Aspergillus niger KJC3|type=CDS|length=2190bp|location=Sequence derived from alignment at ch8:847479..850198+ (Aspergillus niger KJC3)
ATGGACGAGGGACCTCCTCCACCCCCTCCCCCTCACGGCGAGAAGCCACA
AACCACCCAGGGCGAATATCGCAAGACTTCCGACCTCCCTCCTGGCAACT
ACGACATCTTTATCATCCCCCCTCACTCCGCCGGCTCCGGATTCCTCTAC
CTCCCTTCCCTCCAGCCACAACGCAATAGCTTCATCGCGGGGTCCGCCTG
CACACTCTTTGTTGTCCTACTTTGGACCCTCCTATCACCCCTTCTAAAAG
CCTGGTACGCTGCCACCGTCGCCAGTGGCAGCGGCATGGCCATCGCCGTG
CTGGCTATCGGAGTTGGGGTCGCCGGGTGGGCCGTGGGCGCCTCACAATC
AGATTCTGGGGGAGGCCGACGACGGGCCAATTTTGGATTTAGCACCGGCG
GGGGTCCAGGCGCGGGTGGACCCTCCGGCAATGGCGCCGGAGGTGAGTAT
GCGCGGGGACAGCAGTATGGGGCCCAAAATCAGGGCCCGAACGGTCACAA
TGGTGGACAGGGACAGGGACAGGGACAGCAGCAATATGGGGGCAACTTCA
ACTCGGGTCCGCCTCCGGGTGCAGGCCAGTATGGCGGGAACCATCAATAC
CAGAACACTGGTGGGCCCGGAAGTGGACCACCCCCGCAACCGCCGCCGCA
GGCAGGCGGATCAAATAAGACAGGTTCGTCTGCCACCGGCTCTGAAAGCA
AACCTCAAAGTGGAGCTGATTGGGAGAAGGCCCGTGAAGAGACCCGGCGC
AAGGAGGAGCTGCGCCGCAAGATGGAGGAGTTTAAGCGAAAGCGGGAAGC
CGAGCAGCGCGAGAAGCAGCAGAAGCGCGAGCGCGAGGCCATGGAGCGGG
AGCTGCGGGAGCGCAGAGAGCAGCTCGAGAAGGAGATGGCTGCCGCCAAG
GAGGCGGCCGCCCGTGAGGCCCGAGAACGGGCGGAGCGCGAAGCAGCCGA
AGCCAAAGCCAAAGCGGAGCGAGAGGCCGCGGAAGCTCGAGCCAAGGCGG
AACGAGAAGCAGCGGAAGCGCGTGCCAAGGCGGAGCGTGAAGCTGCGGAG
GCCAAAGCTAAAGCGGAGAAAGAGGCCCGAGAGGCCCGCGAGCGAGAAGC
ACGTCGGGCAAAAGAAGCCCGAGAACGAGAGGCGCGACGCGCCGCCGAAG
CCAAGGCCCGTGCTGAGCGCGAGGCCGCGGAGGCCAAGGCTAAAGCAGAG
CGTGAAGCTGCTGAGGCAAAGGCCAAGGCAGAGAAGGAGGAAGAGGAGCG
TAAAGCTGCAGCTAAGAAGGAAGCTGATGCTAAGTTCGCGGCGCTCAAAG
AGGCTGCCGCGAAGAAGTATGCCGAGAAGAAAGCCAAAGATGCGCAGGAG
GCAGCGGCCAAAGAAGCGGCCAGCCAAAAGGCATCTAGCACGTCCACTCC
CCGCACTCCATCACCCAAGAAACCTGCTTATTCCCGCACCGATACCGACA
GCTCATATTCCAATTTTCGACCGACTGACCGTCCCCGCCGGCCGTACGGC
GGCGCCACCTCTGGGTCATCAGTGTACTCGGACTCTTCATACGCGCCGTC
ACAGACAACAGCACGCACGACCCCACCACCATCAAATCGCGGGGCCTATG
AAACCAAAGATCCTGACAAGATTGTCATCAAGGGCGTGTTCGAGTTCAAC
AACAACTTTGTGCGCAGCCCTGTGGCGCAACTTGTCTCAGGCCAGGGCAT
GGTCAGCGACGGATTGGTTCTGAGGATCACGACAGAAGGCCTCTTCATCG
ACGACGACGTGCGCGGTGTCGGTCAGCGGGAATGGGATGTGAAGGCGTGG
ACGATGAACCTCGTTGAGGTATGGTGTCCGAAATTCGGGGCGCAGCGCCA
ACCACCGAAGCCCCCGCCGGGGCCATTCAATCGGCGCGGGAATGAACCGA
CCCCAGAGGAATCGGAAGCATTCCTCGGCAACCTGCTCAAGATGTGCAAG
AACACGTGCCGATTATCAACAGGCGGAGGAGAGGATCAGCGCACGCTGCA
TGTGTTGCGGGCGTCGGTGCGTGACCACGAGGGCAAACGGTATGTGTTTG
TGTTGCAGGAGACGGAGGGGTGGAAGGTGGCGATTGGATTGCAGCGGTTG
CGACGGGGGACGTTGTCGCGGGCATTAGGGGTGATGGGGTTGGGAGTGAA
TGAGAGTCGGATGATATTATCAGGATTAGGATATGAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011513KJC3_011513Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011513-T1KJC3_011513-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011513-T1.utr5p1KJC3_011513-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_011513-T1.utr5p2KJC3_011513-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011513-T1.exon1KJC3_011513-T1.exon1Aspergillus niger KJC3exon
KJC3_011513-T1.exon2KJC3_011513-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011513-T1.cdsKJC3_011513-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011513-T1.utr3p1KJC3_011513-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:847479..850198 +
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