You are here

Home

KJC3_011529-T1, KJC3_011529-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011529-T1
Unique NameKJC3_011529-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:901469..904022+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011529-T1 ID=KJC3_011529-T1|Name=KJC3_011529-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2554bp|location=Sequence derived from alignment at ch8:901469..904022+ (Aspergillus niger KJC3)
TGCATACTTAGTATTGCATAGTAGTTAGTGTCCATCTGTTGCTTAATGTT
AATTCGAATAATCAAAATCATGACAAGACTTGTCCATTCGTCAGGTGGTA
CAATTCTTGGGGTGCAGTGCTAAAGCCTTCTAGTAAATTCTCTGCCTAGG
GCTGACATACGTATATGGACGACAGCTGATGTTGGACGACCAGACTTTAG
AGTGACCGCATCATTTGAAACTACGCCTGTTGTCACAGCAGCTATAGTCC
GCTCCGCTTTAGGTAACACAAAAACGCTTTCTCTAAGCCTTCACCGAAAT
AGTAACGCCATCGGGCTGTGCTGACAGCTCAACACGAGGAGGGCGTTCGA
TAAAGGAAAATATCATGAAGTTGCGTCGAAAGACACGTTTTGTCTGTGTC
TCTGATACACACGCCTACACGCCGTCGGAGGCCGGCTTCAAGCTTCCCGC
TGGTGATGTCTTAATCCATGCCGGTGACCTCACCAACCACGGGAGCGCTG
CTGAACTGCGTAAGACAATGAGCTGGATTGCTACAGCTGACTTCGAAGTC
AAAATCATCATCTGCGGTTCGTCTTCTTCCCATCAAGACTGCCGTATATT
GGGCCTCCAAATACGGCCTTTGTTGTCCGAGAGGGGCCACTCGTAGGGCT
GAAGGACAAAAAGAAGTCAAAAGGCCAAAGGATACGTGCTGAGTACTGGT
AATCATCAGGAAACCATGATATCACACTAGACCCGGGTTTCTACGCTGAA
CACGGCTCTAGCTTTCACGGCCAACATCTAGAAGATACCCAGAAGTGTCT
GGAAATTGTAACCCAAGCGTCACCGTCGATAGTCTATCTCAGGCACCAGT
CAGCACTAATCCGGCTGACCCGGCCTAACGGCCCGAAGACCATCTTCAAA
GTCTTTGGCTCTCCATACTCCCAGTCATCTGGAACTTGGGCGTACGGATA
CGAGTCTTCAAATGCTGGTGCGCTTTGGAACAGCATTCCACTGGATACGG
ATATCACCGTGACCCATACTCCGCCTAACTCCCACTGCGATAGCCGAGTT
GAAGGCATCTCAGTCGGATGCACAGCCCTGCGGGGTGCGTTAAGCAAAGT
TCGACCGTCGCTAGCAATATGTGGCCATGTACACGAGTCGAGAGGCTCGG
AGAGGGTGCGATGGTATACTTCGCAGGCATCGCCATCACAAACCGTGGAT
GTACAAGGACATAAGGATCCGGTTATTCTGCCTCCCCCGGGCAGTAAAAA
GCAGAGCCTTGTCGATCTCACGGGCAAAAAGGCACCCACACTAGATAACA
ATCAGTTTGCCGGCAATAACCTTCGAGCGCCAGTCAGTCAACTGTTCCAA
TCATCACAACATGCTCTGCTGTTACCGTCTTCTGGGTGGCCATCTGATGG
ATTCCAAGGCTCTGAAGCCGATCAATCAACGTCATCCTCCGTGCCTTTGT
GCTTATACGAAAGACACACTGGGAATGAAGATGGGCCTTGTTTAAGGCGA
CGCAAAACATGTATTGTCAATGCGGCGATCGTGGCGACCAGTTGGCCGCA
TCGGGGTGGGAAACGGTTCCATGCCCCTATTGTGGTCGATCTAGAACTAC
CAGTCTGGGAAGAGGAAAATGGGGGAACTGAACCCCACGGCTAGAGAGTG
TAGCTCGTATCGTCTGTCCTGAATGGCCAGGCTAGCATTGACTCCGACGA
TTGGCTGTGCAAGGTGGAATATCTCTTGTCGTGCAGCAGGCAGCTTGAGC
TTTGACCTGCGGTTTGACGTATGGCCGACCGTTTCGGGTGGGATGCATCA
CTGGTTGCCTTGGATTTGGGGGACACTTCAGCCATGTAGCGCACTTCGCT
CCATACTGTTTTGAGTATATACACCGGCCTGGTTGGGACTGATTGTCGGT
CATTGTAAAGGAGCAGGAATAACTTACGCTGTGACTCAAGAGCAGCAAGG
CGGTGGTGTGGTGGTGATGCTCCCTAGCTCCCTTGCTCTTTGTCTTGTGT
CGGGCCGTCATTTGATGAGCCAGAAACCCGGGTTGAACAAGTAGTAGATC
GGGAAAGCAGGGGCAGCGTGGTGACCGGGGGGATGTAAACAGCATGATGA
TCACTGGAAGCTTACGTGAAACTCATAAGCAGCAAATGAAATCGGGGGTG
CCAGCCTGGAAGTGCTGAATTGACATGCAAGATCATCTGAAACATGATGT
GGATGAATGACATCCTTTGCTCATTATAGTAGATTGGAACAGGATCACCA
AGTCAGCCTGAGACGGGTATGGTAGTATGAAATGAACTGCACTCTAGGTC
CGTGACTGGAGCCGGAGGGAGATATCTACGACCATTCCTTTGGGAAACCA
CCAGTCAGAGCCCAGGAGTAGAAATCGTCTAAAATAGGCCGGGGGATGGA
GGCACTTGATGCTGTCCTATGAATGACAGTGATGAAGTGTGGCGGGGTTG
AAAGGGAGAATCGAGTCCTGCCAACCCCTACTTTGGCTCCTGACTGCCAA
GTGTGAGCGGACCCTGTGAGCACACCTCCCTCTATTCCTGCTTGTATGAA
GAAC
back to top

Coding sequence (CDS) from alignment at ch8:901469..904022+

>KJC3_011529-T1 ID=KJC3_011529-T1|Name=KJC3_011529-T1|organism=Aspergillus niger KJC3|type=CDS|length=2274bp|location=Sequence derived from alignment at ch8:901469..904022+ (Aspergillus niger KJC3)
ATGAAGTTGCGTCGAAAGACACGTTTTGTCTGTGTCTCTGATACACACGC
CTACACGCCGTCGGAGGCCGGCTTCAAGCTTCCCGCTGGTGATGTCTTAA
TCCATGCCGGTGACCTCACCAACCACGGGAGCGCTGCTGAACTGCGTAAG
ACAATGAGCTGGATTGCTACAGCTGACTTCGAAGTCAAAATCATCATCTG
CGGAAACCATGATATCACACTAGACCCGGGTTTCTACGCTGAACACGGCT
CTAGCTTTCACGGCCAACATCTAGAAGATACCCAGAAGTGTCTGGAAATT
GTAACCCAAGCGTCACCGTCGATAGTCTATCTCAGGCACCAGTCAGCACT
AATCCGGCTGACCCGGCCTAACGGCCCGAAGACCATCTTCAAAGTCTTTG
GCTCTCCATACTCCCAGTCATCTGGAACTTGGGCGTACGGATACGAGTCT
TCAAATGCTGGTGCGCTTTGGAACAGCATTCCACTGGATACGGATATCAC
CGTGACCCATACTCCGCCTAACTCCCACTGCGATAGCCGAGTTGAAGGCA
TCTCAGTCGGATGCACAGCCCTGCGGGGTGCGTTAAGCAAAGTTCGACCG
TCGCTAGCAATATGTGGCCATGTACACGAGTCGAGAGGCTCGGAGAGGGT
GCGATGGTATACTTCGCAGGCATCGCCATCACAAACCGTGGATGTACAAG
GACATAAGGATCCGGTTATTCTGCCTCCCCCGGGCAGTAAAAAGCAGAGC
CTTGTCGATCTCACGGGCAAAAAGGCACCCACACTAGATAACAATCAGTT
TGCCGGCAATAACCTTCGAGCGCCAGTCAGTCAACTGTTCCAATCATCAC
AACATGCTCTGCTGTTACCGTCTTCTGGGTGGCCATCTGATGGATTCCAA
GGCTCTGAAGCCGATCAATCAACGTCATCCTCCGTGCCTTTGTGCTTATA
CGAAAGACACACTGGGAATGAAGATGGGCCTTGTTTAAGGCGACGCAAAA
CATGTATTGTCAATGCGGCGATCGTGGCGACCAGTTGGCCGCATCGGGGT
GGGAAACGGTTCCATGCCCCTATTGTGGTCGATCTAGAACTACCAGTCTG
GGAAGAGGAAAATGGGGGAACTGAACCCCACGGCTAGATGAAGTTGCGTC
GAAAGACACGTTTTGTCTGTGTCTCTGATACACACGCCTACACGCCGTCG
GAGGCCGGCTTCAAGCTTCCCGCTGGTGATGTCTTAATCCATGCCGGTGA
CCTCACCAACCACGGGAGCGCTGCTGAACTGCGTAAGACAATGAGCTGGA
TTGCTACAGCTGACTTCGAAGTCAAAATCATCATCTGCGGAAACCATGAT
ATCACACTAGACCCGGGTTTCTACGCTGAACACGGCTCTAGCTTTCACGG
CCAACATCTAGAAGATACCCAGAAGTGTCTGGAAATTGTAACCCAAGCGT
CACCGTCGATAGTCTATCTCAGGCACCAGTCAGCACTAATCCGGCTGACC
CGGCCTAACGGCCCGAAGACCATCTTCAAAGTCTTTGGCTCTCCATACTC
CCAGTCATCTGGAACTTGGGCGTACGGATACGAGTCTTCAAATGCTGGTG
CGCTTTGGAACAGCATTCCACTGGATACGGATATCACCGTGACCCATACT
CCGCCTAACTCCCACTGCGATAGCCGAGTTGAAGGCATCTCAGTCGGATG
CACAGCCCTGCGGGGTGCGTTAAGCAAAGTTCGACCGTCGCTAGCAATAT
GTGGCCATGTACACGAGTCGAGAGGCTCGGAGAGGGTGCGATGGTATACT
TCGCAGGCATCGCCATCACAAACCGTGGATGTACAAGGACATAAGGATCC
GGTTATTCTGCCTCCCCCGGGCAGTAAAAAGCAGAGCCTTGTCGATCTCA
CGGGCAAAAAGGCACCCACACTAGATAACAATCAGTTTGCCGGCAATAAC
CTTCGAGCGCCAGTCAGTCAACTGTTCCAATCATCACAACATGCTCTGCT
GTTACCGTCTTCTGGGTGGCCATCTGATGGATTCCAAGGCTCTGAAGCCG
ATCAATCAACGTCATCCTCCGTGCCTTTGTGCTTATACGAAAGACACACT
GGGAATGAAGATGGGCCTTGTTTAAGGCGACGCAAAACATGTATTGTCAA
TGCGGCGATCGTGGCGACCAGTTGGCCGCATCGGGGTGGGAAACGGTTCC
ATGCCCCTATTGTGGTCGATCTAGAACTACCAGTCTGGGAAGAGGAAAAT
GGGGGAACTGAACCCCACGGCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011529KJC3_011529Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011529-T1KJC3_011529-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011529-T1.utr5p1KJC3_011529-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_011529-T1.utr5p2KJC3_011529-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_011529-T1.utr5p3KJC3_011529-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011529-T1.exon1KJC3_011529-T1.exon1Aspergillus niger KJC3exon
KJC3_011529-T1.exon2KJC3_011529-T1.exon2Aspergillus niger KJC3exon
KJC3_011529-T1.exon3KJC3_011529-T1.exon3Aspergillus niger KJC3exon
KJC3_011529-T1.exon4KJC3_011529-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011529-T1.cdsKJC3_011529-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011529-T1.utr3p1KJC3_011529-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029052
DBxrefInterPro:IPR004843
DBxrefPFAM:PF00149
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:901469..904022 +
Powered by Drupal