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KJC3_011538-T1, KJC3_011538-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011538-T1
Unique NameKJC3_011538-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:921734..924766-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011538-T1 ID=KJC3_011538-T1|Name=KJC3_011538-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3033bp|location=Sequence derived from alignment at ch8:921734..924766- (Aspergillus niger KJC3)
ACCATCCATCCCGGGGTTCCACTCAAGTATGAGTCGATGACCGAAGATCC
AAGTCAGGCGCGACAAGTTGATAATTTATCTAACCATTATTGTTGAAGTC
AAATCCTTTATTTCTCACTCTGCTTTTTTCTACCGCTGTTCCTGTGTTCT
GTTCCATGTCCATCACTCCTCTACTACTACACATTCTCCCTGCGTGAGGA
TGCGGCTTGGTGGGGATCCTGTCATTATCAGCAACAGTTCCACGCCATGT
CCACTTCGTCTGTGATCTCACCTTCAGCCCCATCGTCCCTCTCGCCCAGG
AACGGGTCTGACGTTGTGCCTGGCCCGCATACCAGCCACGACGCCCACGG
CATCCCCTCCCATTCCGCACAAGACCACAGCTTGCGCAGCTGCGTCACCT
GCCGTCGGAGAAAAGTTCGCTGCAACAAGAAAACCCCTTGCTCCAACTGC
GTCAAGGCCGGCATCCAGTGTATCTTTCCCCCGCCGGGAAGGGCACCGCG
CAAAGTGAAACGCCCGCAAGATGCGGAGCTCCTGTCTCGCTTAAGGCGCC
TCGAGGGCGTCATTGAACATCTTAGTGAAAAGAAAGCGACTGGTGCTGCG
GCATCTTCTTCTGATACTTCTTCCCCACGTGTACAACAGCACCCACAAAA
TCCACCCGCACCCCCGGCTAATGCGCAGGCCTCGGCGCCTGAAGGCGACG
GAGATGGCTGCCCACTTCTTATGGATGCAGCCAAGCTGGATCCTACCAGA
CCTATAGCGCCTCGGAATATCGAGCATGAGTTTGGTCGATTGGTTATCGA
CGAGGGTCGAAGCCGTTACGTTAGCAACCGATTCTGGGCAAGTCTCGGAG
ATGAGGTGAATACTACTCCCTGTCCTTCTCTTATATCTGTAACGATGCTA
ATGTCAATAGATTGAGGAGTTGCAAGATATCCTAGATCCGTCGTCTTCGG
ACGAGGAAGACTATTCGTCTCCCGAGACATCGTCCAGCCAGTCGGCCAAC
CATGATGGCTTTTTATTCGGGTTCTATTCCGTTTCCCACTCACTACACGA
TTTTCTTCCGCCGAGGCCCCAGATTCCCTTGTTATGGAATACCTGGTTGG
AAAACGTGGCGCCCTTGATACCTATCGTGCATAAAGCGAGCGCCAGGCAG
CTATTTACTACGGCTGCCCAAGATCCAAATTGCTTGGATAAGAACTTTGA
GGCGCTATTTCTTGCAATGTGCATGGTCGCGATCATCAGCATGTCGCCGA
GCCAGTGCTCATCTCACCTGGGAGAAGAGAGGGATGTGCTTGTCAAGCGA
TACCGGTTCGCAGTCGAGCAGGCACTTTCCAAAGCAGATCTTTTGAACAC
GCAAAACATCACTCTCCTACAGGCTGTGGTGATTTTCCTGATAGGCGTTC
GTCGCGAAGACGACACCAAATTTGTCTGGTCTATGACAGCGCTTGTTCTT
CGCCTTGCGCAAGGACTGGGTCTTCATCGGGACGGCACCAACTTTGGCCT
GAAGCCTTATGAAACGGAGATACGCCGACGACTATGGTGGCACATCTGCT
TATTGGACATCCGGGCCGCAGAGGATCACGGTTCTGATGCGCAGATTCAT
GAACGATTGTACGATACTCGACTCCCACTGAATATCAATGACGACGACAT
TACACCAGACATGAAAGAGCCTCCCAAGGAGAGAGTGGGCTGGACGGAAA
TGACATTTTGCCTGATTCGCTGCGATATCACGGTCGCTGTGCGTCGAGTG
AGCTACACTTGTCCAAACGGCCATTTCGTTCCGGCAACTCGGCAGCTCAA
CCCTGATAACTGCTCCAAGATGATCCGGGCGATCAACGACCGTATTGAAG
ACCGATATATCAAACATTGCGACATGAATGTCCCGATTCAGTGGGTTTGC
GCGACGATTGGTCGCCTCATCCTGACCAAGCTGTGGCTCGTCATTCATCA
TCCGATGACCAGGCCTGAACGGGGCCTAACGCTGAGCCACGCCAATCGTG
AGAGCTTATTTGCTACATCAGTGGAGGTAGCCGAGTTCCAGCGGCTGCTG
GATGGCGACGTCAAAACGTACAAATGGAGCTGGCTCTTTGCCACGAACAT
GCAATGGCATGCCATTGCCTTTGTGCTGTCGGAGCTTTGTGTCCGCCCAC
TCAGCCCTCTTACCGACCGAGCATGGAAATGTGTGAGCACCCTGTATACA
GAGTGGATCAAAAACAGCAAACAGCGGAAAGGCATGCTCTGGCGTCCACT
TTCCCGCCTGATGAAGCGAGCAGCCGCGTTCAGAGCTAAGCAAGAGGAGA
TGCGCGCGCAGATGAGTTCCAGCATGATTGCAGCTCACGATGCCGCAATC
CCGAACTGCCCTGGACTCTCAATTATACAGCCCCCGGTTCTGCCCCGAGC
ACTGGACTTTCAGGCTTCACCAACAGGCCAGGAGAAGGAGTCTTTGCGCG
GTCTGCCTGAGAACGGCGGAATCGATATCGACCTGCGCGGCGGACCAGTT
AACGTGATCAACGAATTATTCCCCGACACGGACTGGCTCAATCCTGCCAC
GGCAGCCAGCATACAGCAGCAGGAGTGCTCGGGCGCGTCGATGGACACGC
TAGTGAGACCGACGGAGCCAAGCGAGACCCAGCAGGAGATGCCTAATGCG
AATCTCAACTGGGAAGAGTGGGATCAGGTTATGACTGATTTCCAGATGGA
CCTGCAAGCGTCCAATACGCAGAATCCTTTTGGCAATGCCCTGGATTGGC
TTGCTTGATGATACCAGGTGATGTGTTGATACTTTGATGGCCCTGGTGGC
TATTATCGGCATCATAGGGATGCCTCTGTACTGAATGTCTCCTCTCTATA
CGACCACCAAAACCTCTCCATTCACGATAATGAGAAAGTTAGCTAGGTAT
GAGCTAAAAGCTAATGAATGAGTTATGTATGTACTATGTGCCTTGTTGTA
ACGCAGCCGAGGCAGTACTTTACCTGTATCACCACCCAAGTAGCGAGTAT
AGCAACAATGAAATGAACAAAACCACTCCTATT
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Coding sequence (CDS) from alignment at ch8:921734..924766-

>KJC3_011538-T1 ID=KJC3_011538-T1|Name=KJC3_011538-T1|organism=Aspergillus niger KJC3|type=CDS|length=4914bp|location=Sequence derived from alignment at ch8:921734..924766- (Aspergillus niger KJC3)
ATTGAGGAGTTGCAAGATATCCTAGATCCGTCGTCTTCGGACGAGGAAGA
CTATTCGTCTCCCGAGACATCGTCCAGCCAGTCGGCCAACCATGATGGCT
TTTTATTCGGGTTCTATTCCGTTTCCCACTCACTACACGATTTTCTTCCG
CCGAGGCCCCAGATTCCCTTGTTATGGAATACCTGGTTGGAAAACGTGGC
GCCCTTGATACCTATCGTGCATAAAGCGAGCGCCAGGCAGCTATTTACTA
CGGCTGCCCAAGATCCAAATTGCTTGGATAAGAACTTTGAGGCGCTATTT
CTTGCAATGTGCATGGTCGCGATCATCAGCATGTCGCCGAGCCAGTGCTC
ATCTCACCTGGGAGAAGAGAGGGATGTGCTTGTCAAGCGATACCGGTTCG
CAGTCGAGCAGGCACTTTCCAAAGCAGATCTTTTGAACACGCAAAACATC
ACTCTCCTACAGGCTGTGGTGATTTTCCTGATAGGCGTTCGTCGCGAAGA
CGACACCAAATTTGTCTGGTCTATGACAGCGCTTGTTCTTCGCCTTGCGC
AAGGACTGGGTCTTCATCGGGACGGCACCAACTTTGGCCTGAAGCCTTAT
GAAACGGAGATACGCCGACGACTATGGTGGCACATCTGCTTATTGGACAT
CCGGGCCGCAGAGGATCACGGTTCTGATGCGCAGATTCATGAACGATTGT
ACGATACTCGACTCCCACTGAATATCAATGACGACGACATTACACCAGAC
ATGAAAGAGCCTCCCAAGGAGAGAGTGGGCTGGACGGAAATGACATTTTG
CCTGATTCGCTGCGATATCACGGTCGCTGTGCGTCGAGTGAGCTACACTT
GTCCAAACGGCCATTTCGTTCCGGCAACTCGGCAGCTCAACCCTGATAAC
TGCTCCAAGATGATCCGGGCGATCAACGACCGTATTGAAGACCGATATAT
CAAACATTGCGACATGAATGTCCCGATTCAGTGGGTTTGCGCGACGATTG
GTCGCCTCATCCTGACCAAGCTGTGGCTCGTCATTCATCATCCGATGACC
AGGCCTGAACGGGGCCTAACGCTGAGCCACGCCAATCGTGAGAGCTTATT
TGCTACATCAGTGGAGGTAGCCGAGTTCCAGCGGCTGCTGGATGGCGACG
TCAAAACGTACAAATGGAGCTGGCTCTTTGCCACGAACATGCAATGGCAT
GCCATTGCCTTTGTGCTGTCGGAGCTTTGTGTCCGCCCACTCAGCCCTCT
TACCGACCGAGCATGGAAATGTGTGAGCACCCTGTATACAGAGTGGATCA
AAAACAGCAAACAGCGGAAAGGCATGCTCTGGCGTCCACTTTCCCGCCTG
ATGAAGCGAGCAGCCGCGTTCAGAGCTAAGCAAGAGGAGATGCGCGCGCA
GATGAGTTCCAGCATGATTGCAGCTCACGATGCCGCAATCCCGAACTGCC
CTGGACTCTCAATTATACAGCCCCCGGTTCTGCCCCGAGCACTGGACTTT
CAGGCTTCACCAACAGGCCAGGAGAAGGAGTCTTTGCGCGGTCTGCCTGA
GAACGGCGGAATCGATATCGACCTGCGCGGCGGACCAGTTAACGTGATCA
ACGAATTATTCCCCGACACGGACTGGCTCAATCCTGCCACGGCAGCCAGC
ATACAGCAGCAGGAGTGCTCGGGCGCGTCGATGGACACGCTAGTGAGACC
GACGGAGCCAAGCGAGACCCAGCAGGAGATGCCTAATGCGAATCTCAACT
GGGAAGAGTGGGATCAGGTTATGACTGATTTCCAGATGGACCTGCAAGCG
TCCAATACGCAGAATCCTTTTGGCAATGCCCTGGATTGGCTTGCTTGAAT
GTCCACTTCGTCTGTGATCTCACCTTCAGCCCCATCGTCCCTCTCGCCCA
GGAACGGGTCTGACGTTGTGCCTGGCCCGCATACCAGCCACGACGCCCAC
GGCATCCCCTCCCATTCCGCACAAGACCACAGCTTGCGCAGCTGCGTCAC
CTGCCGTCGGAGAAAAGTTCGCTGCAACAAGAAAACCCCTTGCTCCAACT
GCGTCAAGGCCGGCATCCAGTGTATCTTTCCCCCGCCGGGAAGGGCACCG
CGCAAAGTGAAACGCCCGCAAGATGCGGAGCTCCTGTCTCGCTTAAGGCG
CCTCGAGGGCGTCATTGAACATCTTAGTGAAAAGAAAGCGACTGGTGCTG
CGGCATCTTCTTCTGATACTTCTTCCCCACGTGTACAACAGCACCCACAA
AATCCACCCGCACCCCCGGCTAATGCGCAGGCCTCGGCGCCTGAAGGCGA
CGGAGATGGCTGCCCACTTCTTATGGATGCAGCCAAGCTGGATCCTACCA
GACCTATAGCGCCTCGGAATATCGAGCATGAGTTTGGTCGATTGGTTATC
GACGAGGGTCGAAGCCGTTACGTTAGCAACCGATTCTGGGCAAGTCTCGG
AGATGAGATTGAGGAGTTGCAAGATATCCTAGATCCGTCGTCTTCGGACG
AGGAAGACTATTCGTCTCCCGAGACATCGTCCAGCCAGTCGGCCAACCAT
GATGGCTTTTTATTCGGGTTCTATTCCGTTTCCCACTCACTACACGATTT
TCTTCCGCCGAGGCCCCAGATTCCCTTGTTATGGAATACCTGGTTGGAAA
ACGTGGCGCCCTTGATACCTATCGTGCATAAAGCGAGCGCCAGGCAGCTA
TTTACTACGGCTGCCCAAGATCCAAATTGCTTGGATAAGAACTTTGAGGC
GCTATTTCTTGCAATGTGCATGGTCGCGATCATCAGCATGTCGCCGAGCC
AGTGCTCATCTCACCTGGGAGAAGAGAGGGATGTGCTTGTCAAGCGATAC
CGGTTCGCAGTCGAGCAGGCACTTTCCAAAGCAGATCTTTTGAACACGCA
AAACATCACTCTCCTACAGGCTGTGGTGATTTTCCTGATAGGCGTTCGTC
GCGAAGACGACACCAAATTTGTCTGGTCTATGACAGCGCTTGTTCTTCGC
CTTGCGCAAGGACTGGGTCTTCATCGGGACGGCACCAACTTTGGCCTGAA
GCCTTATGAAACGGAGATACGCCGACGACTATGGTGGCACATCTGCTTAT
TGGACATCCGGGCCGCAGAGGATCACGGTTCTGATGCGCAGATTCATGAA
CGATTGTACGATACTCGACTCCCACTGAATATCAATGACGACGACATTAC
ACCAGACATGAAAGAGCCTCCCAAGGAGAGAGTGGGCTGGACGGAAATGA
CATTTTGCCTGATTCGCTGCGATATCACGGTCGCTGTGCGTCGAGTGAGC
TACACTTGTCCAAACGGCCATTTCGTTCCGGCAACTCGGCAGCTCAACCC
TGATAACTGCTCCAAGATGATCCGGGCGATCAACGACCGTATTGAAGACC
GATATATCAAACATTGCGACATGAATGTCCCGATTCAGTGGGTTTGCGCG
ACGATTGGTCGCCTCATCCTGACCAAGCTGTGGCTCGTCATTCATCATCC
GATGACCAGGCCTGAACGGGGCCTAACGCTGAGCCACGCCAATCGTGAGA
GCTTATTTGCTACATCAGTGGAGGTAGCCGAGTTCCAGCGGCTGCTGGAT
GGCGACGTCAAAACGTACAAATGGAGCTGGCTCTTTGCCACGAACATGCA
ATGGCATGCCATTGCCTTTGTGCTGTCGGAGCTTTGTGTCCGCCCACTCA
GCCCTCTTACCGACCGAGCATGGAAATGTGTGAGCACCCTGTATACAGAG
TGGATCAAAAACAGCAAACAGCGGAAAGGCATGCTCTGGCGTCCACTTTC
CCGCCTGATGAAGCGAGCAGCCGCGTTCAGAGCTAAGCAAGAGGAGATGC
GCGCGCAGATGAGTTCCAGCATGATTGCAGCTCACGATGCCGCAATCCCG
AACTGCCCTGGACTCTCAATTATACAGCCCCCGGTTCTGCCCCGAGCACT
GGACTTTCAGGCTTCACCAACAGGCCAGGAGAAGGAGTCTTTGCGCGGTC
TGCCTGAGAACGGCGGAATCGATATCGACCTGCGCGGCGGACCAGTTAAC
GTGATCAACGAATTATTCCCCGACACGGACTGGCTCAATCCTGCCACGGC
AGCCAGCATACAGCAGCAGGAGTGCTCGGGCGCGTCGATGGACACGCTAG
TGAGACCGACGGAGCCAAGCGAGACCCAGCAGGAGATGCCTAATGCGAAT
CTCAACTGGGAAGAGTGGGATCAGGTTATGACTGATTTCCAGATGGACCT
GCAAGCGTCCAATACGCAGAATCCTTTTGGCAATGCCCTGGATTGGCTTG
CTTGAATGTCCACTTCGTCTGTGATCTCACCTTCAGCCCCATCGTCCCTC
TCGCCCAGGAACGGGTCTGACGTTGTGCCTGGCCCGCATACCAGCCACGA
CGCCCACGGCATCCCCTCCCATTCCGCACAAGACCACAGCTTGCGCAGCT
GCGTCACCTGCCGTCGGAGAAAAGTTCGCTGCAACAAGAAAACCCCTTGC
TCCAACTGCGTCAAGGCCGGCATCCAGTGTATCTTTCCCCCGCCGGGAAG
GGCACCGCGCAAAGTGAAACGCCCGCAAGATGCGGAGCTCCTGTCTCGCT
TAAGGCGCCTCGAGGGCGTCATTGAACATCTTAGTGAAAAGAAAGCGACT
GGTGCTGCGGCATCTTCTTCTGATACTTCTTCCCCACGTGTACAACAGCA
CCCACAAAATCCACCCGCACCCCCGGCTAATGCGCAGGCCTCGGCGCCTG
AAGGCGACGGAGATGGCTGCCCACTTCTTATGGATGCAGCCAAGCTGGAT
CCTACCAGACCTATAGCGCCTCGGAATATCGAGCATGAGTTTGGTCGATT
GGTTATCGACGAGGGTCGAAGCCGTTACGTTAGCAACCGATTCTGGGCAA
GTCTCGGAGATGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011538KJC3_011538Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011538-T1KJC3_011538-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011538-T1.cdsKJC3_011538-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011538-T1.utr3p1KJC3_011538-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011538-T1.exon2KJC3_011538-T1.exon2Aspergillus niger KJC3exon
KJC3_011538-T1.exon1KJC3_011538-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011538-T1.utr5p1KJC3_011538-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:921734..924766 -
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