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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:949752..953275- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011547-T1 ID=KJC3_011547-T1|Name=KJC3_011547-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3524bp|location=Sequence derived from alignment at ch8:949752..953275- (Aspergillus niger KJC3)
TGCAAAGGCCAGTCCGGCCAGGTAAGGTAAGTAAAGCTCAAGTACTTTCT
TTACTGGGACACTTACTATTCCTACTAGATCGCTTTGTGAAGGCGACCTG
CTGCCTCTACAAACTCGAAGTCTTTCCCTTCCTTTTTCCCCCCCAGCATT
CACTGTGTCTAAACATCCCACAAATCTCTCTTGCTTGCCTCTTCACTGCC
CGCTTCCCGTGTTGGTGCTGGGCTGTTGGTGGTGTTTCTCGTGGTTAATC
CCTCCCCCTCCGATCTTCTCCCTTTCATTCTTCCTTTTCCTCCCTCTTTC
GCCATCTGCCCGTCTTCCCCCATTCCGTCAAGACTTCATAGTTCCACTGC
TACGGAAAGCTTTAACACAACCCACCCCCAGCTCTTTTCTCCTTTCTACA
GCAAACATATCTTGCCATCTATCTCAATCCCTTCATCTTGTGCATTATAC
CTTCTCTGTCTAGATCTCTTGCTTCTGGTTTCTTGGCTTGTTGCCGGCGT
GGCAGACGCATAGTTTTTCTGCTTACCCGCTCGGCTTCCTACTTTTCCTC
TTCAAGAACTACGAACCTCTTAAACTATCCCTGCCAACCGTTCGCGGCGT
CCACCGTGGTTGACTCTGCACAACAACCACCATACTTCTGCTTCATCGCG
CTTCTCAGAGGGCGATCTCCTCACATCTTCAGATCTTGATTCTCTCAATT
TATTTCAGACACTGACGCGGATTTCTCTCGCCCAAAGGTATGTTACATAT
CACCTGCCTGACCCATACTACGTTCTACTTGTGCCTGCCAAAGCCATGTC
TGCCACGTTTCTGTCAACGTTTTGGTCCATCCGTCAGTGGAGAGCAGCCC
AATTCTTCATGCATCTCACTTGTCTTGCTTGCTCGACCGTGTTTTGTTTT
CCCCTTTCCCACCCTTACGCTCTCGGGGCGTCTGGTGTAGAAGATTGCGC
TGCAGTTACTTCTGGCGTCTTGGCGCCGCAAGCGAACTTTTCAGCCGGAA
GTTAGTCGACTAACACTATAGCCAGATCCCACGTTGGGCCTCTCGAAGGA
GAATCAGATATCCCCTTTTGCTAGTGCTCTCACTTCCTACTACTTTCTCC
TTGACTACTTCTTCTTCTCATCTTCCCTTTCTGTCCATTATGGCTCCGCT
TCCTCATAACGAGGCGGAACTGGACAGCCATACTTCGGACTTGGCCAGCC
AGGACTCTCCGCTGCGCCGACAATTCTCCGAGCCATTGCACGCTCACTCT
ACTTCTACTCAGGCGTCTCCATCCCCCTCCCCCATGACGCACAAATCTAA
ATGCTCTTGGTGTGGCAAGGGATTCGAGTCTGCCAATGATCCCAAGTCGC
AACAAGATGCTCTCAAAGAACACATTGCTACTGTTCACCCGCACATTGCC
AAGTTCTCCTTGTATGGTGGTCCCGGCGACGATGAAGAATCTCAACTTCA
GGAAGCCAATCCTCAAGCAGAGGACAATGCAGAGGTAGCGGCCGAGAGTG
AAGCGGATGACGAAGAGCAAGATGAAGCCACTGCAAATGGCGTGACTGAG
GCGACGGAAGCTTACGATAACGACAAGGACCAAAGCGTCGATGGCGATGA
ATTGGAGGCTGACGGTCCAGAGGCTGACGCTCTTTCTAATCAACTTCATG
AGTTCTCTCGCGGTCAGGACTCAGTCTCGTTGGATCAACGTCTTCACAAT
TTGTGGAACGTCAATGATATCCGTAAATTCTCGGATGACTACGACGAGAA
ATCGTCTGAGCTGGACCACTCTTGGTCCATGGTGCTCCGGGACCCGAAGC
GCGCCAAAAAGCGTGAAAGCAACGAGTTCGCTGAACGGCCTGAACCGTAT
AGGAAAGCGAAAGCTGCCAAAGGGGAGTTCCTCGAAATGACTTCCCTAGA
AGAATTTTTGGCGCAGCTTCGGGACCCGGAGCACCGTTCGACCGAAGAGC
TGTATGCTATCACGGAAAACGTGGCATACGCCTTGAAAGCGTGGCAGGAT
GAGTATATAGCGATAGAGAAGCTGCACAAGCTGGCGACTCGCCATAACGC
CAAGCCAACCAGCGACCCGAGGAAGTTGCAAAGGCCTCAAGTATTTGAGG
ATAAGAAGGAAGCCATGCTCTACGGCTACAAGTACGAGGCCAAGGAGGAT
AAAGTGGGCAACCAGAACCCATTCACGCAGGGCGGGTTCAAGCCAACGCC
CGCTCAATCCCGAAAGATGATGAACAAGATTGGACCCAATAATCCTAACC
CGGATGGCTGGCGCACCATCGTCAAGTTTGGAGTCGAACACGTGCCGAAG
TTCCAAAACCCGCCCCGCGAAGAATTTGTTGGCAAGGCAACGCGCAAGCG
CAAGGCCGCAGAGTTGGAGGCGGCTAACCGAGAGTTGGCAGCGTCTGGCT
CCGAAGAGCCCACTATTGAGACACCAGCTCAGACCGACACGGAAGAGTAC
GGCCCCAAGCGGCGCACGCGTGGCCGTCGCCCTGGCACCGAGGTCGACGA
AGCCCAGGCATCTGCGACACCCCCTCGAGGTGCGGTTCGGGGACGTGGAA
GTGGCCGCGGCCGCGGTAGAGGTGCAGCTCGTGGAGGCGGAGTCATTGCT
TCGACGGAGGTATATCAGCCGGTGGCTGCTGCGACCTCAGCACCACGACC
ATCATCTGGACGGGGCGAACATGTCGCCAGCTCCCTTCAGGCACGGCCTG
CCACTGCCCAGTTGCCGCCGATCGAACCGGCACCGAGTGGTACGACGCCT
ACGCCTCCCGCAAGCATACAGCCCAGCAGCACGCTGGAGGATGGGATGGA
TCCCGCTGAACAGGCTCGGCGACAGAAGATTGCCAACTCGAAGAACCCGA
AGCGAACAGAGGCCATGCTTAACCACTGGGCGCGTTTCAACCGCGAGGGT
CGGGTGCGCAATCCCAAACGATCCAAGGCTCAGATCGAGGCCGACCGCGC
AGCGGAGGCTGCCCGGAAGGCATCCGAGCCCCCAAAGCCGGGAAAGATCA
AGAAGAAGCCGGAGAGCGGGGTGTATGGGGAGCCTGCGCGACCCAACGCA
GGGATCGCGCCCGCACCGATGCCTGCATCAACACCCCTGGCCCCTGGTCC
TCCTGCGCATCATCAGCTCGCGCCGATTGCTGCCCCGCGACCGTCACTTA
CGCCATATGCTCCTATCGATCCTCGAGCGGTGGCACCGTTTCCAGGGCCT
CATGGTCTTTTGCAGCAAGCGCCGCTGCAGCCGTATCGCACACCTTATCC
GGAGTATTACAGTCCTTATGGGGCGCCTGCGCCTGGGCTGCCACCACCGC
ATCCGCGACCTGCGTGACCTACGCTGGCTTGTATACCTACTTTTCGCTCG
TTGTATGTATTATTGTGCTTTTGTTATCCTGTGATTAGTGAGCGTGCTTT
CAGCGACAGGCGTCGGGGCTTTTGCGATCCGTGGTTGGTTGTGAATATTG
CCAACCAGGTAGGATGTACATTGGGCACATAAAAGGCTGTATTATACAAT
AATTGCCACACTCTTATTTCAGCT back to topCoding sequence (CDS) from alignment at ch8:949752..953275- >KJC3_011547-T1 ID=KJC3_011547-T1|Name=KJC3_011547-T1|organism=Aspergillus niger KJC3|type=CDS|length=2178bp|location=Sequence derived from alignment at ch8:949752..953275- (Aspergillus niger KJC3)
ATGGCTCCGCTTCCTCATAACGAGGCGGAACTGGACAGCCATACTTCGGA
CTTGGCCAGCCAGGACTCTCCGCTGCGCCGACAATTCTCCGAGCCATTGC
ACGCTCACTCTACTTCTACTCAGGCGTCTCCATCCCCCTCCCCCATGACG
CACAAATCTAAATGCTCTTGGTGTGGCAAGGGATTCGAGTCTGCCAATGA
TCCCAAGTCGCAACAAGATGCTCTCAAAGAACACATTGCTACTGTTCACC
CGCACATTGCCAAGTTCTCCTTGTATGGTGGTCCCGGCGACGATGAAGAA
TCTCAACTTCAGGAAGCCAATCCTCAAGCAGAGGACAATGCAGAGGTAGC
GGCCGAGAGTGAAGCGGATGACGAAGAGCAAGATGAAGCCACTGCAAATG
GCGTGACTGAGGCGACGGAAGCTTACGATAACGACAAGGACCAAAGCGTC
GATGGCGATGAATTGGAGGCTGACGGTCCAGAGGCTGACGCTCTTTCTAA
TCAACTTCATGAGTTCTCTCGCGGTCAGGACTCAGTCTCGTTGGATCAAC
GTCTTCACAATTTGTGGAACGTCAATGATATCCGTAAATTCTCGGATGAC
TACGACGAGAAATCGTCTGAGCTGGACCACTCTTGGTCCATGGTGCTCCG
GGACCCGAAGCGCGCCAAAAAGCGTGAAAGCAACGAGTTCGCTGAACGGC
CTGAACCGTATAGGAAAGCGAAAGCTGCCAAAGGGGAGTTCCTCGAAATG
ACTTCCCTAGAAGAATTTTTGGCGCAGCTTCGGGACCCGGAGCACCGTTC
GACCGAAGAGCTGTATGCTATCACGGAAAACGTGGCATACGCCTTGAAAG
CGTGGCAGGATGAGTATATAGCGATAGAGAAGCTGCACAAGCTGGCGACT
CGCCATAACGCCAAGCCAACCAGCGACCCGAGGAAGTTGCAAAGGCCTCA
AGTATTTGAGGATAAGAAGGAAGCCATGCTCTACGGCTACAAGTACGAGG
CCAAGGAGGATAAAGTGGGCAACCAGAACCCATTCACGCAGGGCGGGTTC
AAGCCAACGCCCGCTCAATCCCGAAAGATGATGAACAAGATTGGACCCAA
TAATCCTAACCCGGATGGCTGGCGCACCATCGTCAAGTTTGGAGTCGAAC
ACGTGCCGAAGTTCCAAAACCCGCCCCGCGAAGAATTTGTTGGCAAGGCA
ACGCGCAAGCGCAAGGCCGCAGAGTTGGAGGCGGCTAACCGAGAGTTGGC
AGCGTCTGGCTCCGAAGAGCCCACTATTGAGACACCAGCTCAGACCGACA
CGGAAGAGTACGGCCCCAAGCGGCGCACGCGTGGCCGTCGCCCTGGCACC
GAGGTCGACGAAGCCCAGGCATCTGCGACACCCCCTCGAGGTGCGGTTCG
GGGACGTGGAAGTGGCCGCGGCCGCGGTAGAGGTGCAGCTCGTGGAGGCG
GAGTCATTGCTTCGACGGAGGTATATCAGCCGGTGGCTGCTGCGACCTCA
GCACCACGACCATCATCTGGACGGGGCGAACATGTCGCCAGCTCCCTTCA
GGCACGGCCTGCCACTGCCCAGTTGCCGCCGATCGAACCGGCACCGAGTG
GTACGACGCCTACGCCTCCCGCAAGCATACAGCCCAGCAGCACGCTGGAG
GATGGGATGGATCCCGCTGAACAGGCTCGGCGACAGAAGATTGCCAACTC
GAAGAACCCGAAGCGAACAGAGGCCATGCTTAACCACTGGGCGCGTTTCA
ACCGCGAGGGTCGGGTGCGCAATCCCAAACGATCCAAGGCTCAGATCGAG
GCCGACCGCGCAGCGGAGGCTGCCCGGAAGGCATCCGAGCCCCCAAAGCC
GGGAAAGATCAAGAAGAAGCCGGAGAGCGGGGTGTATGGGGAGCCTGCGC
GACCCAACGCAGGGATCGCGCCCGCACCGATGCCTGCATCAACACCCCTG
GCCCCTGGTCCTCCTGCGCATCATCAGCTCGCGCCGATTGCTGCCCCGCG
ACCGTCACTTACGCCATATGCTCCTATCGATCCTCGAGCGGTGGCACCGT
TTCCAGGGCCTCATGGTCTTTTGCAGCAAGCGCCGCTGCAGCCGTATCGC
ACACCTTATCCGGAGTATTACAGTCCTTATGGGGCGCCTGCGCCTGGGCT
GCCACCACCGCATCCGCGACCTGCGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011547-T1.utr3p1 | KJC3_011547-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:949752..953275 - |
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