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KJC3_011565-T1, KJC3_011565-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011565-T1
Unique NameKJC3_011565-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1002291..1003273-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011565-T1 ID=KJC3_011565-T1|Name=KJC3_011565-T1|organism=Aspergillus niger KJC3|type=mRNA|length=983bp|location=Sequence derived from alignment at ch8:1002291..1003273- (Aspergillus niger KJC3)
CAGCATCCATTTAATTAAATAAAAGTATACCAATTCCTACCCCCTCACAA
CCCACCCACCTTCGTACACCACATCCACATCCACAACACCATACATACAC
TCAACTCCCAAAATCCAAAGAAATCAAATTCAAAATGACCTACACCATCA
CCTCCCCACCCCCCTCCCTCTGCCCGCCCACCAGCGCCGCCATGATCTCC
TTCCTCGAGAACTTCTACCGCATCAGCGACACCGAATCCCTCCACAACGA
CTACGCGACGAATTTCACGGAAGATGCGACGCTCATTATGGGCTCGAAGG
TTGCCAAGGGATTGGATGGTATGCAATCGCAATCACAATAAATGCGACCC
TCTCTTTCTTTCTTTTAAAACAATCAAATCAAATTACCTTGATTCTTATA
TACTACATGGGGCTGATTGATAACAATGAATTATTAAATCTAGAGATCTT
GAATTTGAGACACGGTCTCTGGACGCACGTCGCGCGCCGCAAACACACCC
CCGAGCGGGTGTATTTCGGTGCGGAGAGAGAACTCATGCTATATGGGACG
GTGAGGTATGTGCTCAGGAAGGATGTCGAGGCTGGGAAGGAGGAGGATGA
GATTGAGGTGCCCTGGGCCGGGAGGGTCGTGTTTGATGAGAAGGTTGAGA
AGATGCGGTTTTATCAGGTTTATTTGGTATGTCTCTCCCCCCCCCTCTCT
CTTCCACATTCTCTATACTTTGTCCCTTGTTTGGTTTTTCTGGGGGGTAT
ATGGTTTGGCTAACTGTGTATCTCTTGTGTGTTTAGGATCCGACGGCGCA
GGGTGGGAAGAAATGAGTACTTGGTACTGCGGAGGAGTAGGTTATGGGGT
TAGGATTGGGTTGGTGAGAGGGAGGAGGAAGAGTATAGATGTTGATAAGT
TGGGGTTATCTCGTTGACATGGATGGGCATTGCATGGTGTATATAGTTGG
TTTTTTTTATATATGGTTGTATACATTGCATTG
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Coding sequence (CDS) from alignment at ch8:1002291..1003273-

>KJC3_011565-T1 ID=KJC3_011565-T1|Name=KJC3_011565-T1|organism=Aspergillus niger KJC3|type=CDS|length=1341bp|location=Sequence derived from alignment at ch8:1002291..1003273- (Aspergillus niger KJC3)
GATCCGACGGCGCAGGGTGGGAAGAAATGAAGATCTTGAATTTGAGACAC
GGTCTCTGGACGCACGTCGCGCGCCGCAAACACACCCCCGAGCGGGTGTA
TTTCGGTGCGGAGAGAGAACTCATGCTATATGGGACGGTGAGGTATGTGC
TCAGGAAGGATGTCGAGGCTGGGAAGGAGGAGGATGAGATTGAGGTGCCC
TGGGCCGGGAGGGTCGTGTTTGATGAGAAGGTTGAGAAGATGCGGTTTTA
TCAGGTTTATTTGATGACCTACACCATCACCTCCCCACCCCCCTCCCTCT
GCCCGCCCACCAGCGCCGCCATGATCTCCTTCCTCGAGAACTTCTACCGC
ATCAGCGACACCGAATCCCTCCACAACGACTACGCGACGAATTTCACGGA
AGATGCGACGCTCATTATGGGCTCGAAGGTTGCCAAGGGATTGGATGGAT
CCGACGGCGCAGGGTGGGAAGAAATGAAGATCTTGAATTTGAGACACGGT
CTCTGGACGCACGTCGCGCGCCGCAAACACACCCCCGAGCGGGTGTATTT
CGGTGCGGAGAGAGAACTCATGCTATATGGGACGGTGAGGTATGTGCTCA
GGAAGGATGTCGAGGCTGGGAAGGAGGAGGATGAGATTGAGGTGCCCTGG
GCCGGGAGGGTCGTGTTTGATGAGAAGGTTGAGAAGATGCGGTTTTATCA
GGTTTATTTGATGACCTACACCATCACCTCCCCACCCCCCTCCCTCTGCC
CGCCCACCAGCGCCGCCATGATCTCCTTCCTCGAGAACTTCTACCGCATC
AGCGACACCGAATCCCTCCACAACGACTACGCGACGAATTTCACGGAAGA
TGCGACGCTCATTATGGGCTCGAAGGTTGCCAAGGGATTGGATGGATCCG
ACGGCGCAGGGTGGGAAGAAATGAAGATCTTGAATTTGAGACACGGTCTC
TGGACGCACGTCGCGCGCCGCAAACACACCCCCGAGCGGGTGTATTTCGG
TGCGGAGAGAGAACTCATGCTATATGGGACGGTGAGGTATGTGCTCAGGA
AGGATGTCGAGGCTGGGAAGGAGGAGGATGAGATTGAGGTGCCCTGGGCC
GGGAGGGTCGTGTTTGATGAGAAGGTTGAGAAGATGCGGTTTTATCAGGT
TTATTTGATGACCTACACCATCACCTCCCCACCCCCCTCCCTCTGCCCGC
CCACCAGCGCCGCCATGATCTCCTTCCTCGAGAACTTCTACCGCATCAGC
GACACCGAATCCCTCCACAACGACTACGCGACGAATTTCACGGAAGATGC
GACGCTCATTATGGGCTCGAAGGTTGCCAAGGGATTGGATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011565KJC3_011565Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011565-T1KJC3_011565-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011565-T1.cdsKJC3_011565-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011565-T1.utr3p1KJC3_011565-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011565-T1.exon3KJC3_011565-T1.exon3Aspergillus niger KJC3exon
KJC3_011565-T1.exon2KJC3_011565-T1.exon2Aspergillus niger KJC3exon
KJC3_011565-T1.exon1KJC3_011565-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011565-T1.utr5p1KJC3_011565-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR032710
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1002291..1003273 -
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