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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1027819..1028718- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011574-T1 ID=KJC3_011574-T1|Name=KJC3_011574-T1|organism=Aspergillus niger KJC3|type=mRNA|length=900bp|location=Sequence derived from alignment at ch8:1027819..1028718- (Aspergillus niger KJC3)
CAGATTCCATATATGCCTCAGGCCACCACCCCACCATAAATCAAGGCGGG
GGTGGGATCTTTTGCTTCATATGCAAACAGCAACAGCAAACATCGTGCTT
CCAACCACACCATCTTCCCCATCCTTAAGCACATACATAGCCTCTCTTTG
AACCTCCTGCACAACCTTATCTGTACTCAAGGTACATAATAACATATTAA
ACCATGGCACCCAAGAACAAAGGCGGCGACAAGAAAGGCAAGGATGGCGG
AGACAGCAACTCCAAAGGCGGCGGAAAGGGCCTCAAGCCTGCGAATGCTA
TTAACGTGAGGCATATTCTTGTATGTATACTCTTTCTCTCTCTCTTTCTC
TCTCCACTTCTTTATCTTTCGTTTATTGTGCTGGGTTGTGTGGTTGTAGA
TGATCTTTTAGCTTTGGTGTGTATTTCTTATACTGCCATCTACCTATTCA
TTTCTCTGTCAATGAAAGAGGATAACATATGATGAACTTATATATATATC
AAAAGTCCACATTCCTGGGTATGTTAACTAACAACGGCAGTGCGAGAAAT
TCTCCAAAAAGGAAGAAGCCCTAGAGAAGTTGCGCAACGGAGCCAAGTTC
GACGAAGTGGCCAGAGAATTTTCGGAGGATAAGGCTAGGCAGGGTATGTT
TTCTTACTTTTCCTTCTTCTATTCTATATCTTATCCATTTCCCATCGGAG
TGGCTATGTGTTGGGTCAGCGCTAATTCTAGGGGAACTGGTACAGGCGGC
TCCCTTGGGTGGAAGACCCGGGGCAGTCTGGATGCGACGTTCGAGAAGGC
GGCGTATGATCTGGAGCCGAGTACGACGGGGAACCCCAAGTACGTGGATG
TGAAGACTGGGTTTGGGTATCATATTATTATGGTTGAGGGGAGGAAGTAG
back to topCoding sequence (CDS) from alignment at ch8:1027819..1028718- >KJC3_011574-T1 ID=KJC3_011574-T1|Name=KJC3_011574-T1|organism=Aspergillus niger KJC3|type=CDS|length=1125bp|location=Sequence derived from alignment at ch8:1027819..1028718- (Aspergillus niger KJC3)
GCGGCTCCCTTGGGTGGAAGACCCGGGGCAGTCTGGATGCGACGTTCGAG
AAGGCGGCGTATGATCTGGAGCCGAGTACGACGGGGAACCCCAAGTACGT
GGATGTGAAGACTGGGTTTGGGTATCATATTATTATGGTTGAGGGGAGGA
AGTAGTGCGAGAAATTCTCCAAAAAGGAAGAAGCCCTAGAGAAGTTGCGC
AACGGAGCCAAGTTCGACGAAGTGGCCAGAGAATTTTCGGAGGATAAGGC
TAGGCAGGATGGCACCCAAGAACAAAGGCGGCGACAAGAAAGGCAAGGAT
GGCGGAGACAGCAACTCCAAAGGCGGCGGAAAGGGCCTCAAGCCTGCGAA
TGCTATTAACGTGAGGCATATTCTTGCGGCTCCCTTGGGTGGAAGACCCG
GGGCAGTCTGGATGCGACGTTCGAGAAGGCGGCGTATGATCTGGAGCCGA
GTACGACGGGGAACCCCAAGTACGTGGATGTGAAGACTGGGTTTGGGTAT
CATATTATTATGGTTGAGGGGAGGAAGTAGTGCGAGAAATTCTCCAAAAA
GGAAGAAGCCCTAGAGAAGTTGCGCAACGGAGCCAAGTTCGACGAAGTGG
CCAGAGAATTTTCGGAGGATAAGGCTAGGCAGGATGGCACCCAAGAACAA
AGGCGGCGACAAGAAAGGCAAGGATGGCGGAGACAGCAACTCCAAAGGCG
GCGGAAAGGGCCTCAAGCCTGCGAATGCTATTAACGTGAGGCATATTCTT
GCGGCTCCCTTGGGTGGAAGACCCGGGGCAGTCTGGATGCGACGTTCGAG
AAGGCGGCGTATGATCTGGAGCCGAGTACGACGGGGAACCCCAAGTACGT
GGATGTGAAGACTGGGTTTGGGTATCATATTATTATGGTTGAGGGGAGGA
AGTAGTGCGAGAAATTCTCCAAAAAGGAAGAAGCCCTAGAGAAGTTGCGC
AACGGAGCCAAGTTCGACGAAGTGGCCAGAGAATTTTCGGAGGATAAGGC
TAGGCAGGATGGCACCCAAGAACAAAGGCGGCGACAAGAAAGGCAAGGAT
GGCGGAGACAGCAACTCCAAAGGCGGCGGAAAGGGCCTCAAGCCTGCGAA
TGCTATTAACGTGAGGCATATTCTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011574-T1.utr5p1 | KJC3_011574-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000297 |
| DBxref | PFAM:PF13616 |
| DBxref | PFAM:PF00639 |
| Product | Peptidyl-prolyl cis-trans isomerase pin4 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1027819..1028718 - |
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