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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1040853..1043329- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011579-T1 ID=KJC3_011579-T1|Name=KJC3_011579-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2477bp|location=Sequence derived from alignment at ch8:1040853..1043329- (Aspergillus niger KJC3)
GCTTCGGCATCGCCGCTCGTCTCTTGCACCCTTCCAACGGTCGGGAATTT
ATGTTTCACTCGCCCCCGCTCTCTGTCTTGAGCTGCTATTTATCGGGGAT
TTTCTTTCTCCTTGGACCGACTCCTGGTGGATGCGCTCTTGTATTGCCCA
TCTTCCTCCCTGGCGGACTGCCTCTCCGCCGCCACTCGATCTACACCCAT
TTCTTTCACTCAGATCATGCCCCCCGTCAACTCGCCATCTGTAAGTTTTC
ACTACTTGCTTTGGCCCTCCGTGCATGGTGATTGTTCCTGCGTATCCCAT
ACCTCGGGACGGTCGCCACTTTGACTTTGCGCACGACCGTGGGATTGAAG
TACCAAGCCGATGTTGTGACGTTGCCTTGCCTTCTCAGTTGATGCTATCG
ACAGATGAGCTTCCACTCTAACTTTCTCTCCTTCATCACAGGATCCCCCC
GCTCTGTCGTCTTCCGCTTCTTCTTTTCGGCCTTTGACCGCGCTCTCCTT
GCCTGTTCCTTCGCTCCCCGCAGCCGTGTCCGATGACGCTCATGATGATA
ACGTGAGCTTTCTCCGATCTCGTGTGCGCTCCCCACCAGACTCGACCTCT
TCACTCAGTCGCCAGCGCCGACGTCGACAACAGACCGCGTCCGACCTTGA
TCTAGAGCCTATGGAGCTGGACGACCCGTCTCACTTGCGCATCGAAATCA
ACCGCCGCATCCCTATCGTGCGCCGTCAACGCGACACTTCCGGCAACCCC
AACCCGACTAATCTCCCCAACTACGAAGGTCAGATGTCGAATTCACGCTC
GGTGTACGGCTGGGCTCCGGCCTCTGATGATGACGACGATGATGTAGGCT
ACGAGCCGCTTCACGAAAGTAACACGATCTCATGGTTCGGCCGATTCTCC
GATCGCTACGCAGCTGCTCGTCGCCACGCGCGCCGGGATGCCGCTGGTCG
AAGTCCTCCAGCTTTGCCAGACGAACCTTCCGATAGCAGTCTCAATCGCC
AAAGCGATCCAGCCCTTTCGACAACAGAGGCTTTCCTACAGTCAGTGCGA
CGCCAACAGCGGGGTTCGCGGACGCGCGCGCGGGCGCTTCACGAATATTT
GTTAGAGCGGGAACGAGCTTCCCAGGATTCAGATGAAAGTCGAGAGCGAC
CAGGTCCTCCATCAGCCTCACGAGCATATCGCTTCCTTCCCAGTGCCCGG
GGCGAGTCGCAACGATTTCTGACTCACAATGACCTACGCGCTCGGATAAG
CGCTCATCGACAGTTACACATGGACAACCCTCCAAACCCACGGCTGAAGG
AGACCATCCTATATCTGGATCGCCTGCGGTACTCTACCTCGTTTGAGGAA
AGCCTCACCTCAGCGGCGGCAGGGGGTTTTGTTCATACTGATTTCCTTAA
CGGGAACGAGGATGACTTTATCCTCGACATCAGTTCGATAGCGCCGCCGC
CAGACAGTTCATGGCTTCGTCCCGGTATGGTTTTCTCGGGGTCGCAGCGG
GCTGCCAGCAGTGCGAGCTCGCTTTTTGCACAACGAGGGCTCAGCCCGTC
CGCATCCCAGGACCCGATGATTGTCAATGGGAGTGACAACAGTCGCATCA
GTGTATATACCACAACAGGACGACGGTACCTGGCTAATAATATATACCAC
CTCGGAGGCGGTAAGGACGAGAACTGGCCGGTAAAGGTCACCATACATAG
TATCAACCCGGACGATATGACGCTGTCGGGTACCATGGAAGCATACAACA
TACCGGACAAAACGACCCCGGCGCATGATGCACATATCGTCACATATCTA
GAGGGGGAAATTATTGATTTTAACAAACACACGCTCGAAACGAAGAACTT
CAAGGCAGATGCGGAGATTGACAGTACATATTGGCGGGAGCTGCAGCCAT
TCAAGAACTTGAGCGATGAGGAAATGACGCGGAAACTCGTTAGTCGGAAG
TGGGTAACGGAGCAGTTATCCAAGCAGTGGATACTGATGAGATGGAAGGG
TGAGTTTCGATTAAGAGAGAGTCTTCAAAATAAAACTAATATAAGAGCCT
TAGAACGCTGTTTCATCACACCCACCGACTCCCGACAAGGACTGACAATT
TCGGGATTCTACTATATCTCACTGAACCGGCAAAGTGGCAATATTGAAGG
GTTATATTACGATCCGGGCAGCTCGCCATACCAGCAGCTGTCATTGAAGC
CAGAGTCGAAGAAAATGGTGCGTCCCTCATACGGGTTCCGCTAACCTTCG
AAAAACAGCCTACGGCACAGCTGTCTGTTATATTCGTGTCATATGTAAAC
TGCTAATCTTGGGCTTTGCTTTATCATGGCGTTGGATGGGACAATGTTTG
CATAGCCGGGTGTTCTTATACCAGTATCAGCATTCATTGTCAAATTGTGC
AAATATTACCCAATTACATTACATCAGTCTACACATTGTGGATCTACGCG
CTCCTACCACCAACCCCCTAAGGGAAA back to topCoding sequence (CDS) from alignment at ch8:1040853..1043329- >KJC3_011579-T1 ID=KJC3_011579-T1|Name=KJC3_011579-T1|organism=Aspergillus niger KJC3|type=CDS|length=5319bp|location=Sequence derived from alignment at ch8:1040853..1043329- (Aspergillus niger KJC3)
AACGCTGTTTCATCACACCCACCGACTCCCGACAAGGACTGACAATTTCG
GGATTCTACTATATCTCACTGAACCGGCAAAGTGGCAATATTGAAGGGTT
ATATTACGATCCGGGCAGCTCGCCATACCAGCAGCTGTCATTGAAGCCAG
AGTCGAAGAAAATGGTGCGTCCCTCATACGGGTTCCGCTAAGATCCCCCC
GCTCTGTCGTCTTCCGCTTCTTCTTTTCGGCCTTTGACCGCGCTCTCCTT
GCCTGTTCCTTCGCTCCCCGCAGCCGTGTCCGATGACGCTCATGATGATA
ACGTGAGCTTTCTCCGATCTCGTGTGCGCTCCCCACCAGACTCGACCTCT
TCACTCAGTCGCCAGCGCCGACGTCGACAACAGACCGCGTCCGACCTTGA
TCTAGAGCCTATGGAGCTGGACGACCCGTCTCACTTGCGCATCGAAATCA
ACCGCCGCATCCCTATCGTGCGCCGTCAACGCGACACTTCCGGCAACCCC
AACCCGACTAATCTCCCCAACTACGAAGGTCAGATGTCGAATTCACGCTC
GGTGTACGGCTGGGCTCCGGCCTCTGATGATGACGACGATGATGTAGGCT
ACGAGCCGCTTCACGAAAGTAACACGATCTCATGGTTCGGCCGATTCTCC
GATCGCTACGCAGCTGCTCGTCGCCACGCGCGCCGGGATGCCGCTGGTCG
AAGTCCTCCAGCTTTGCCAGACGAACCTTCCGATAGCAGTCTCAATCGCC
AAAGCGATCCAGCCCTTTCGACAACAGAGGCTTTCCTACAGTCAGTGCGA
CGCCAACAGCGGGGTTCGCGGACGCGCGCGCGGGCGCTTCACGAATATTT
GTTAGAGCGGGAACGAGCTTCCCAGGATTCAGATGAAAGTCGAGAGCGAC
CAGGTCCTCCATCAGCCTCACGAGCATATCGCTTCCTTCCCAGTGCCCGG
GGCGAGTCGCAACGATTTCTGACTCACAATGACCTACGCGCTCGGATAAG
CGCTCATCGACAGTTACACATGGACAACCCTCCAAACCCACGGCTGAAGG
AGACCATCCTATATCTGGATCGCCTGCGGTACTCTACCTCGTTTGAGGAA
AGCCTCACCTCAGCGGCGGCAGGGGGTTTTGTTCATACTGATTTCCTTAA
CGGGAACGAGGATGACTTTATCCTCGACATCAGTTCGATAGCGCCGCCGC
CAGACAGTTCATGGCTTCGTCCCGGTATGGTTTTCTCGGGGTCGCAGCGG
GCTGCCAGCAGTGCGAGCTCGCTTTTTGCACAACGAGGGCTCAGCCCGTC
CGCATCCCAGGACCCGATGATTGTCAATGGGAGTGACAACAGTCGCATCA
GTGTATATACCACAACAGGACGACGGTACCTGGCTAATAATATATACCAC
CTCGGAGGCGGTAAGGACGAGAACTGGCCGGTAAAGGTCACCATACATAG
TATCAACCCGGACGATATGACGCTGTCGGGTACCATGGAAGCATACAACA
TACCGGACAAAACGACCCCGGCGCATGATGCACATATCGTCACATATCTA
GAGGGGGAAATTATTGATTTTAACAAACACACGCTCGAAACGAAGAACTT
CAAGGCAGATGCGGAGATTGACAGTACATATTGGCGGGAGCTGCAGCCAT
TCAAGAACTTGAGCGATGAGGAAATGACGCGGAAACTCGTTAGTCGGAAG
TGGGTAACGGAGCAGTTATCCAAGCAGTGGATACTGATGAGATGGAAGGA
TGCCCCCCGTCAACTCGCCATCTAACGCTGTTTCATCACACCCACCGACT
CCCGACAAGGACTGACAATTTCGGGATTCTACTATATCTCACTGAACCGG
CAAAGTGGCAATATTGAAGGGTTATATTACGATCCGGGCAGCTCGCCATA
CCAGCAGCTGTCATTGAAGCCAGAGTCGAAGAAAATGGTGCGTCCCTCAT
ACGGGTTCCGCTAAGATCCCCCCGCTCTGTCGTCTTCCGCTTCTTCTTTT
CGGCCTTTGACCGCGCTCTCCTTGCCTGTTCCTTCGCTCCCCGCAGCCGT
GTCCGATGACGCTCATGATGATAACGTGAGCTTTCTCCGATCTCGTGTGC
GCTCCCCACCAGACTCGACCTCTTCACTCAGTCGCCAGCGCCGACGTCGA
CAACAGACCGCGTCCGACCTTGATCTAGAGCCTATGGAGCTGGACGACCC
GTCTCACTTGCGCATCGAAATCAACCGCCGCATCCCTATCGTGCGCCGTC
AACGCGACACTTCCGGCAACCCCAACCCGACTAATCTCCCCAACTACGAA
GGTCAGATGTCGAATTCACGCTCGGTGTACGGCTGGGCTCCGGCCTCTGA
TGATGACGACGATGATGTAGGCTACGAGCCGCTTCACGAAAGTAACACGA
TCTCATGGTTCGGCCGATTCTCCGATCGCTACGCAGCTGCTCGTCGCCAC
GCGCGCCGGGATGCCGCTGGTCGAAGTCCTCCAGCTTTGCCAGACGAACC
TTCCGATAGCAGTCTCAATCGCCAAAGCGATCCAGCCCTTTCGACAACAG
AGGCTTTCCTACAGTCAGTGCGACGCCAACAGCGGGGTTCGCGGACGCGC
GCGCGGGCGCTTCACGAATATTTGTTAGAGCGGGAACGAGCTTCCCAGGA
TTCAGATGAAAGTCGAGAGCGACCAGGTCCTCCATCAGCCTCACGAGCAT
ATCGCTTCCTTCCCAGTGCCCGGGGCGAGTCGCAACGATTTCTGACTCAC
AATGACCTACGCGCTCGGATAAGCGCTCATCGACAGTTACACATGGACAA
CCCTCCAAACCCACGGCTGAAGGAGACCATCCTATATCTGGATCGCCTGC
GGTACTCTACCTCGTTTGAGGAAAGCCTCACCTCAGCGGCGGCAGGGGGT
TTTGTTCATACTGATTTCCTTAACGGGAACGAGGATGACTTTATCCTCGA
CATCAGTTCGATAGCGCCGCCGCCAGACAGTTCATGGCTTCGTCCCGGTA
TGGTTTTCTCGGGGTCGCAGCGGGCTGCCAGCAGTGCGAGCTCGCTTTTT
GCACAACGAGGGCTCAGCCCGTCCGCATCCCAGGACCCGATGATTGTCAA
TGGGAGTGACAACAGTCGCATCAGTGTATATACCACAACAGGACGACGGT
ACCTGGCTAATAATATATACCACCTCGGAGGCGGTAAGGACGAGAACTGG
CCGGTAAAGGTCACCATACATAGTATCAACCCGGACGATATGACGCTGTC
GGGTACCATGGAAGCATACAACATACCGGACAAAACGACCCCGGCGCATG
ATGCACATATCGTCACATATCTAGAGGGGGAAATTATTGATTTTAACAAA
CACACGCTCGAAACGAAGAACTTCAAGGCAGATGCGGAGATTGACAGTAC
ATATTGGCGGGAGCTGCAGCCATTCAAGAACTTGAGCGATGAGGAAATGA
CGCGGAAACTCGTTAGTCGGAAGTGGGTAACGGAGCAGTTATCCAAGCAG
TGGATACTGATGAGATGGAAGGATGCCCCCCGTCAACTCGCCATCTAACG
CTGTTTCATCACACCCACCGACTCCCGACAAGGACTGACAATTTCGGGAT
TCTACTATATCTCACTGAACCGGCAAAGTGGCAATATTGAAGGGTTATAT
TACGATCCGGGCAGCTCGCCATACCAGCAGCTGTCATTGAAGCCAGAGTC
GAAGAAAATGGTGCGTCCCTCATACGGGTTCCGCTAAGATCCCCCCGCTC
TGTCGTCTTCCGCTTCTTCTTTTCGGCCTTTGACCGCGCTCTCCTTGCCT
GTTCCTTCGCTCCCCGCAGCCGTGTCCGATGACGCTCATGATGATAACGT
GAGCTTTCTCCGATCTCGTGTGCGCTCCCCACCAGACTCGACCTCTTCAC
TCAGTCGCCAGCGCCGACGTCGACAACAGACCGCGTCCGACCTTGATCTA
GAGCCTATGGAGCTGGACGACCCGTCTCACTTGCGCATCGAAATCAACCG
CCGCATCCCTATCGTGCGCCGTCAACGCGACACTTCCGGCAACCCCAACC
CGACTAATCTCCCCAACTACGAAGGTCAGATGTCGAATTCACGCTCGGTG
TACGGCTGGGCTCCGGCCTCTGATGATGACGACGATGATGTAGGCTACGA
GCCGCTTCACGAAAGTAACACGATCTCATGGTTCGGCCGATTCTCCGATC
GCTACGCAGCTGCTCGTCGCCACGCGCGCCGGGATGCCGCTGGTCGAAGT
CCTCCAGCTTTGCCAGACGAACCTTCCGATAGCAGTCTCAATCGCCAAAG
CGATCCAGCCCTTTCGACAACAGAGGCTTTCCTACAGTCAGTGCGACGCC
AACAGCGGGGTTCGCGGACGCGCGCGCGGGCGCTTCACGAATATTTGTTA
GAGCGGGAACGAGCTTCCCAGGATTCAGATGAAAGTCGAGAGCGACCAGG
TCCTCCATCAGCCTCACGAGCATATCGCTTCCTTCCCAGTGCCCGGGGCG
AGTCGCAACGATTTCTGACTCACAATGACCTACGCGCTCGGATAAGCGCT
CATCGACAGTTACACATGGACAACCCTCCAAACCCACGGCTGAAGGAGAC
CATCCTATATCTGGATCGCCTGCGGTACTCTACCTCGTTTGAGGAAAGCC
TCACCTCAGCGGCGGCAGGGGGTTTTGTTCATACTGATTTCCTTAACGGG
AACGAGGATGACTTTATCCTCGACATCAGTTCGATAGCGCCGCCGCCAGA
CAGTTCATGGCTTCGTCCCGGTATGGTTTTCTCGGGGTCGCAGCGGGCTG
CCAGCAGTGCGAGCTCGCTTTTTGCACAACGAGGGCTCAGCCCGTCCGCA
TCCCAGGACCCGATGATTGTCAATGGGAGTGACAACAGTCGCATCAGTGT
ATATACCACAACAGGACGACGGTACCTGGCTAATAATATATACCACCTCG
GAGGCGGTAAGGACGAGAACTGGCCGGTAAAGGTCACCATACATAGTATC
AACCCGGACGATATGACGCTGTCGGGTACCATGGAAGCATACAACATACC
GGACAAAACGACCCCGGCGCATGATGCACATATCGTCACATATCTAGAGG
GGGAAATTATTGATTTTAACAAACACACGCTCGAAACGAAGAACTTCAAG
GCAGATGCGGAGATTGACAGTACATATTGGCGGGAGCTGCAGCCATTCAA
GAACTTGAGCGATGAGGAAATGACGCGGAAACTCGTTAGTCGGAAGTGGG
TAACGGAGCAGTTATCCAAGCAGTGGATACTGATGAGATGGAAGGATGCC
CCCCGTCAACTCGCCATCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011579-T1.utr3p1 | KJC3_011579-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011579-T1.utr5p1 | KJC3_011579-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018618 |
| DBxref | PFAM:PF09783 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1040853..1043329 - |
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