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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1085752..1086701+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011592-T1 ID=KJC3_011592-T1|Name=KJC3_011592-T1|organism=Aspergillus niger KJC3|type=mRNA|length=950bp|location=Sequence derived from alignment at ch8:1085752..1086701+ (Aspergillus niger KJC3)
ATGGCCGACTCATCGGCTTCGCAACCTCCCCCTCCAGCTGCTGCCCCTGC
TTCCGCCTCGGCTCCAGCTCCAGCTCCAGCTCCTCCAGCATCGCAAGATT
CCTCCTCCGCGACTGTCGTCCCCAAACAAGAACCAGATACCGCTGACAAC
ACCCTGGATGCGTCTATCGAACAAGACGTCGACATAAACACAAACAACAC
CGCCAACATGCCGAACCAGAATCCCGCTGGCGATGACGCCGCCGCCGCCG
CCGGAAACTCCATCCCCGCGCCCACCTCCGTGGATGCTCTGGCGGCCGCC
GCAGCACCTGCCAAGAAAGAAACCAGCTTGCGGGAGTTCATGGGCAAGAT
GGACGAATATGCGCCGATTGTAAGATTCCTTGCCCTCTCCAGCTGGATTC
CATCTTATATCACTTTTTCTCTCCACTACCACCCTCAGTTACTTCCACCC
CATATTTCTATTCCATGTCTTTCTAACACGGATATCTTTAGATCCCCGAC
GCCGTCACAGCCCACTATCTCACTCTTGCCGGTCTTCCACCTCCGGGTAA
CGGCCCCAACCAAACACCGCCTCACCTCGCCCGTCTTCTCGCTCTCGCAA
CCCAGAAATTTATCGCCGACATCGCTGCCGACTCGTACCAGTACGCGCGC
ATTCGCGCCTCCAACAGCTCCTCTGCCAGTAACCCCATGGGCAGTTTGAA
CGCCGCCTCAGGCTTGAACATGCCCGCCGGCGCTGCGGGTGTGGGGTCCG
CCGGTGCTGCGACCGGAGTATCAGGCGGCGATGCAGGAAAGGGCAAAGCG
GGCACCCATCTCGGAATCCAGAGACCCGGGTTTGGAGGTGGCGGTTCTGG
AGGTTCCGGACAGGGACGGACGGTGCTTACGATGGAGGACTTGGGTATGG
CGGTGTCGGAGTATGGTGTCAGTGTTAAGAGGGGGGAGTTCTATCGGTGA
back to topCoding sequence (CDS) from alignment at ch8:1085752..1086701+ >KJC3_011592-T1 ID=KJC3_011592-T1|Name=KJC3_011592-T1|organism=Aspergillus niger KJC3|type=CDS|length=1656bp|location=Sequence derived from alignment at ch8:1085752..1086701+ (Aspergillus niger KJC3)
ATGGCCGACTCATCGGCTTCGCAACCTCCCCCTCCAGCTGCTGCCCCTGC
TTCCGCCTCGGCTCCAGCTCCAGCTCCAGCTCCTCCAGCATCGCAAGATT
CCTCCTCCGCGACTGTCGTCCCCAAACAAGAACCAGATACCGCTGACAAC
ACCCTGGATGCGTCTATCGAACAAGACGTCGACATAAACACAAACAACAC
CGCCAACATGCCGAACCAGAATCCCGCTGGCGATGACGCCGCCGCCGCCG
CCGGAAACTCCATCCCCGCGCCCACCTCCGTGGATGCTCTGGCGGCCGCC
GCAGCACCTGCCAAGAAAGAAACCAGCTTGCGGGAGTTCATGGGCAAGAT
GGACGAATATGCGCCGATTATCCCCGACGCCGTCACAGCCCACTATCTCA
CTCTTGCCGGTCTTCCACCTCCGGGTAACGGCCCCAACCAAACACCGCCT
CACCTCGCCCGTCTTCTCGCTCTCGCAACCCAGAAATTTATCGCCGACAT
CGCTGCCGACTCGTACCAGTACGCGCGCATTCGCGCCTCCAACAGCTCCT
CTGCCAGTAACCCCATGGGCAGTTTGAACGCCGCCTCAGGCTTGAACATG
CCCGCCGGCGCTGCGGGTGTGGGGTCCGCCGGTGCTGCGACCGGAGTATC
AGGCGGCGATGCAGGAAAGGGCAAAGCGGGCACCCATCTCGGAATCCAGA
GACCCGGGTTTGGAGGTGGCGGTTCTGGAGGTTCCGGACAGGGACGGACG
GTGCTTACGATGGAGGACTTGGGTATGGCGGTGTCGGAGTATGGTGTCAG
TGTTAAGAGGGGGGAGTTCTATCGGTGAATGGCCGACTCATCGGCTTCGC
AACCTCCCCCTCCAGCTGCTGCCCCTGCTTCCGCCTCGGCTCCAGCTCCA
GCTCCAGCTCCTCCAGCATCGCAAGATTCCTCCTCCGCGACTGTCGTCCC
CAAACAAGAACCAGATACCGCTGACAACACCCTGGATGCGTCTATCGAAC
AAGACGTCGACATAAACACAAACAACACCGCCAACATGCCGAACCAGAAT
CCCGCTGGCGATGACGCCGCCGCCGCCGCCGGAAACTCCATCCCCGCGCC
CACCTCCGTGGATGCTCTGGCGGCCGCCGCAGCACCTGCCAAGAAAGAAA
CCAGCTTGCGGGAGTTCATGGGCAAGATGGACGAATATGCGCCGATTATC
CCCGACGCCGTCACAGCCCACTATCTCACTCTTGCCGGTCTTCCACCTCC
GGGTAACGGCCCCAACCAAACACCGCCTCACCTCGCCCGTCTTCTCGCTC
TCGCAACCCAGAAATTTATCGCCGACATCGCTGCCGACTCGTACCAGTAC
GCGCGCATTCGCGCCTCCAACAGCTCCTCTGCCAGTAACCCCATGGGCAG
TTTGAACGCCGCCTCAGGCTTGAACATGCCCGCCGGCGCTGCGGGTGTGG
GGTCCGCCGGTGCTGCGACCGGAGTATCAGGCGGCGATGCAGGAAAGGGC
AAAGCGGGCACCCATCTCGGAATCCAGAGACCCGGGTTTGGAGGTGGCGG
TTCTGGAGGTTCCGGACAGGGACGGACGGTGCTTACGATGGAGGACTTGG
GTATGGCGGTGTCGGAGTATGGTGTCAGTGTTAAGAGGGGGGAGTTCTAT
CGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006352 | DNA-templated transcription, initiation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003923 |
| DBxref | PFAM:PF03540 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1085752..1086701 + |
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