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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1104791..1107879- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011602-T1 ID=KJC3_011602-T1|Name=KJC3_011602-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3089bp|location=Sequence derived from alignment at ch8:1104791..1107879- (Aspergillus niger KJC3)
CATGTTTCATTCGAGTCCAGTGTGTCCCGAATGGACCAAATCCAAGTGCC
CGAATGTCCGACTCAAGGCATATTGCGCATAGGCATTATGCACGGTATAT
GCGGGTGGCCAACTCAGGACCTACCAGTCAAGGATTGATTCAATACGGTA
GGCTATTGTCTTGGGATCAAGCTGTGAATGTTCTTCTGGTAGGATAAGTT
ACTCTCTACGCGGACCACAGCCATGGATCCCATTGCAAGGAACCCGAAAA
CAACAAAAATCGTAATGGATGGGCGTCACGGGGACAACCGGCAGCGGTGA
GGCGCCAAGGCAGCGATACCATGATGAGCGAAACACGTCACAACAGATAC
CGGGGGATGGGCCGGCACCGCAGATACTTGCTGTTTTGGCTTGCCCCACT
AAATTCCGTCGACATTATTGGCTTACTGCTGCAGTGGTGTCACAGTAGCG
CGGTACTGTGGGGGTTCCCAGACGGTCACAGCCGGTCACGGTGGGAAGCA
ATCGCCCTCCCCAATTTGCTTTCGATTCCCTGATTATTTTCCTTTCCCCT
ACTCGCATTTCTTTGATCCTGCTTATCGAACCCGCGCCCTGACTTCCATT
CCATTATCACCTGGGTCGTCGCGGCTCTCTGCCTGAGCGTTCCTGTCCAT
CACCCGCTCATCTCAACCCGCGGTGTTTGTCTCTGTGCGCCCTTCCTTGT
GGTGCCGTGTTTGCTTTCGCGACCTACCTCGCCTGGAGAGCGCCGACAGA
CGCGCCTGCAACGTGGCCGCCGTTTTGGCGACGCATCTTCCTTCATCACC
AACCGTCAACTGATACCCCTCGCTTCTTCATTGACCCAGCTCGCGAGCCT
GATCATTCATCATGGTGCGCTCACTGCCGAAGAAAAACAACCCTCTCATC
CTTGCGGACGTGGCTCCTGCTTGTAAGTTGTGATTCCAGCTAGCGCCCGA
GCTCAGACTCGATCGTGGCATGCCGATATCTCCACCAAAGCGTGCGCCAG
GCTAACCCGTCTCCTCCTATCTCCGCGATATCAGACGATGAACTTCTCTC
GCGCCGTCGTCTGGGAAAGACCAACCTCGCCGTGAAACCCACCCAGGTTG
GCACGTCAAATGCGACAAAGCCTGAAAACCTCGGCCCCTTCGAGTATGCA
CACTTGCGCGCGCCGCTGCCTAGAGACCTCAAGGGCTCCGAGATTTTCCC
CTCACACTCGCCTCAACAACATCCCGAAACCTACTTTTTGATGGTAAGGA
TGGCTGATGACGAACAAAATGTGATGTCATAGAATGGCTGTTGACCTGTC
GCTATAGAGACGTAGCAAAGATGGATTCGTCAGTGCTACCGGAATGTTCA
AGATTGCCTTCCCTTGGGCAAAGCTCGATGAAGAACGGTCTGAGCGGGAG
TATCTGAAGACCCGGACGGAGACTAGTGAAGATGAGATCGCCGGCAATGT
TTGGATCTCGCCTCTGCTCGGTAAGCGTCACAATTCCGCAGATATGAATG
TTGCTCTGATGACTTTTAGCCCTTGAGCTAGCAAAGGAGTATCAAATGTA
CGATTGGGTTAGGGCCCTTCTCGATCCTACCGACATCGTTCAAAGTCCCT
CGTCCGCGAAGAAGCAAATTACCCCTCCCCCTCGGTTTGATTTGCCGCCG
ATCGAAGCCCCGGCCATTCTCACTGCACCACGTCTCCGTAGGGGACGGTC
CGCTTCTCCAAGCAAGAAGTCGACCTCCCCACGCAAGCCCCGCCAGACTC
GCGCCATGAAAGAGGCCAACGCTGCGGCGACCAGTGCTGCCAACGCCAGC
CTCCAGTCTTCTTTGGACTTGACGGCTTCCACAGTGGAGTCGGAATCGGT
CACCGGCACCGTTCATCAGAGTGTGGAGGTGGACGACAACGAGAAGCCCG
CTCCTACCCCGAAGAAACCGGCATCAGCATCCAAGGCAAAGAGGACGGCT
GCTCGGGTGGAAGAGCCCGAGGAGAAGGAGGAGAAGGAACCTGAGAAGGT
GAAGGTCGATGTTGAGACCAATGCGGAAGCTGTTGACGAGGCCAAAACCA
CCCAAACCACCGTTTCCGTTGAGATGCCTATCAGCCTTCCTGAGGCACCG
TCTGCTGCCGATACTGAGCAGATGATTGCCAAGGCGAAAGAAATGGTAGA
AGAAGCGGTCAAGCTTCAGACCGAGACGGCAGAGCCATCGTCGGCCAAGG
CAGCCCAGAAGCGCAAGACGGAAGTGCTCAGCGAAGATGACGAGGAAGAA
GATGAAGAAGCCAAGACCCTCCGGGTGAAGAGGGCCAAGGTTCTGGAGGA
GAAGCTGAAGCAGGAGCGTGTGCGGAACCGTGCTCTTGTTGGTGTTACAG
CTGCCTTTGCGCTCGCGTAAGTCTTGCATGCCAAATGCTAAATCTCCCGT
GCACATTGCTAACCTGCCTTGCAGAGCCTCTATTCCGTATTTCTTCTAGA
CACCCTAACTACTGGCCTGGAAGCACATTGTTGTGATTGTGCGCCGCGTC
GGCCTACTTACGTCCAGCTCACGTCTGGACAAATCCGCCATCGATTCCCC
CGCCCCTTTGGAAAACCTCTCCCTTATTCCCCGACTGCTATGGTTCTGAA
CGATGCTTAATGGAGAAGCAGCCGAAGCTGTTCCTTATCCGTTCACAGTT
TGCCCCTACTCTGGAATCCATCCGAGTTCAGGCTTTGGCCAATCCACCCG
AGCGCATCACGATCCCTAAGTCCCAATTGAAGTGATTCTTGATGTACCGT
ATTGGCCGCGAATATTTCTTTACTAATGATGCCATTTGGGTGCGAGTGAT
GTGGTTCGCACGGGGGATTGGCCGGTGAGGTCCTGGCGATCGAAGAAAGC
CTTGGGTTCGTTTCGTTCATTATCTATGCCGTTTCTTATTATCACCTGGA
TACCTGATATACGCCTCTATAATGTGGTTTTCTTTTTACTTTTTCAATTT
TCTGTTCTACACCATTTGGACCGGGGCTGCACCCTGGAGTCGTGATGCAA
TCGGGATGGTTTGACTGGATTGTGTTCGGAGTTATGTCATTGTTAGGTAG
ATTTGCAGATGATGAATATGCAGTAACTATGAATTGAGC back to topCoding sequence (CDS) from alignment at ch8:1104791..1107879- >KJC3_011602-T1 ID=KJC3_011602-T1|Name=KJC3_011602-T1|organism=Aspergillus niger KJC3|type=CDS|length=6525bp|location=Sequence derived from alignment at ch8:1104791..1107879- (Aspergillus niger KJC3)
AGCCTCTATTCCGTATTTCTTCTAGCCCTTGAGCTAGCAAAGGAGTATCA
AATGTACGATTGGGTTAGGGCCCTTCTCGATCCTACCGACATCGTTCAAA
GTCCCTCGTCCGCGAAGAAGCAAATTACCCCTCCCCCTCGGTTTGATTTG
CCGCCGATCGAAGCCCCGGCCATTCTCACTGCACCACGTCTCCGTAGGGG
ACGGTCCGCTTCTCCAAGCAAGAAGTCGACCTCCCCACGCAAGCCCCGCC
AGACTCGCGCCATGAAAGAGGCCAACGCTGCGGCGACCAGTGCTGCCAAC
GCCAGCCTCCAGTCTTCTTTGGACTTGACGGCTTCCACAGTGGAGTCGGA
ATCGGTCACCGGCACCGTTCATCAGAGTGTGGAGGTGGACGACAACGAGA
AGCCCGCTCCTACCCCGAAGAAACCGGCATCAGCATCCAAGGCAAAGAGG
ACGGCTGCTCGGGTGGAAGAGCCCGAGGAGAAGGAGGAGAAGGAACCTGA
GAAGGTGAAGGTCGATGTTGAGACCAATGCGGAAGCTGTTGACGAGGCCA
AAACCACCCAAACCACCGTTTCCGTTGAGATGCCTATCAGCCTTCCTGAG
GCACCGTCTGCTGCCGATACTGAGCAGATGATTGCCAAGGCGAAAGAAAT
GGTAGAAGAAGCGGTCAAGCTTCAGACCGAGACGGCAGAGCCATCGTCGG
CCAAGGCAGCCCAGAAGCGCAAGACGGAAGTGCTCAGCGAAGATGACGAG
GAAGAAGATGAAGAAGCCAAGACCCTCCGGGTGAAGAGGGCCAAGGTTCT
GGAGGAGAAGCTGAAGCAGGAGCGTGTGCGGAACCGTGCTCTTGTTGGTG
TTACAGCTGCCTTTGCGCTCGCAGACGTAGCAAAGATGGATTCGTCAGTG
CTACCGGAATGTTCAAGATTGCCTTCCCTTGGGCAAAGCTCGATGAAGAA
CGGTCTGAGCGGGAGTATCTGAAGACCCGGACGGAGACTAGTGAAGATGA
GATCGCCGGCAATGTTTGGATCTCGCCTCTGCTCGACGATGAACTTCTCT
CGCGCCGTCGTCTGGGAAAGACCAACCTCGCCGTGAAACCCACCCAGGTT
GGCACGTCAAATGCGACAAAGCCTGAAAACCTCGGCCCCTTCGAGTATGC
ACACTTGCGCGCGCCGCTGCCTAGAGACCTCAAGGGCTCCGAGATTTTCC
CCTCACACTCGCCTCAACAACATCCCGAAACCTACTTTTTGATGATGGTG
CGCTCACTGCCGAAGAAAAACAACCCTCTCATCCTTGCGGACGTGGCTCC
TGCTTAGCCTCTATTCCGTATTTCTTCTAGCCCTTGAGCTAGCAAAGGAG
TATCAAATGTACGATTGGGTTAGGGCCCTTCTCGATCCTACCGACATCGT
TCAAAGTCCCTCGTCCGCGAAGAAGCAAATTACCCCTCCCCCTCGGTTTG
ATTTGCCGCCGATCGAAGCCCCGGCCATTCTCACTGCACCACGTCTCCGT
AGGGGACGGTCCGCTTCTCCAAGCAAGAAGTCGACCTCCCCACGCAAGCC
CCGCCAGACTCGCGCCATGAAAGAGGCCAACGCTGCGGCGACCAGTGCTG
CCAACGCCAGCCTCCAGTCTTCTTTGGACTTGACGGCTTCCACAGTGGAG
TCGGAATCGGTCACCGGCACCGTTCATCAGAGTGTGGAGGTGGACGACAA
CGAGAAGCCCGCTCCTACCCCGAAGAAACCGGCATCAGCATCCAAGGCAA
AGAGGACGGCTGCTCGGGTGGAAGAGCCCGAGGAGAAGGAGGAGAAGGAA
CCTGAGAAGGTGAAGGTCGATGTTGAGACCAATGCGGAAGCTGTTGACGA
GGCCAAAACCACCCAAACCACCGTTTCCGTTGAGATGCCTATCAGCCTTC
CTGAGGCACCGTCTGCTGCCGATACTGAGCAGATGATTGCCAAGGCGAAA
GAAATGGTAGAAGAAGCGGTCAAGCTTCAGACCGAGACGGCAGAGCCATC
GTCGGCCAAGGCAGCCCAGAAGCGCAAGACGGAAGTGCTCAGCGAAGATG
ACGAGGAAGAAGATGAAGAAGCCAAGACCCTCCGGGTGAAGAGGGCCAAG
GTTCTGGAGGAGAAGCTGAAGCAGGAGCGTGTGCGGAACCGTGCTCTTGT
TGGTGTTACAGCTGCCTTTGCGCTCGCAGACGTAGCAAAGATGGATTCGT
CAGTGCTACCGGAATGTTCAAGATTGCCTTCCCTTGGGCAAAGCTCGATG
AAGAACGGTCTGAGCGGGAGTATCTGAAGACCCGGACGGAGACTAGTGAA
GATGAGATCGCCGGCAATGTTTGGATCTCGCCTCTGCTCGACGATGAACT
TCTCTCGCGCCGTCGTCTGGGAAAGACCAACCTCGCCGTGAAACCCACCC
AGGTTGGCACGTCAAATGCGACAAAGCCTGAAAACCTCGGCCCCTTCGAG
TATGCACACTTGCGCGCGCCGCTGCCTAGAGACCTCAAGGGCTCCGAGAT
TTTCCCCTCACACTCGCCTCAACAACATCCCGAAACCTACTTTTTGATGA
TGGTGCGCTCACTGCCGAAGAAAAACAACCCTCTCATCCTTGCGGACGTG
GCTCCTGCTTAGCCTCTATTCCGTATTTCTTCTAGCCCTTGAGCTAGCAA
AGGAGTATCAAATGTACGATTGGGTTAGGGCCCTTCTCGATCCTACCGAC
ATCGTTCAAAGTCCCTCGTCCGCGAAGAAGCAAATTACCCCTCCCCCTCG
GTTTGATTTGCCGCCGATCGAAGCCCCGGCCATTCTCACTGCACCACGTC
TCCGTAGGGGACGGTCCGCTTCTCCAAGCAAGAAGTCGACCTCCCCACGC
AAGCCCCGCCAGACTCGCGCCATGAAAGAGGCCAACGCTGCGGCGACCAG
TGCTGCCAACGCCAGCCTCCAGTCTTCTTTGGACTTGACGGCTTCCACAG
TGGAGTCGGAATCGGTCACCGGCACCGTTCATCAGAGTGTGGAGGTGGAC
GACAACGAGAAGCCCGCTCCTACCCCGAAGAAACCGGCATCAGCATCCAA
GGCAAAGAGGACGGCTGCTCGGGTGGAAGAGCCCGAGGAGAAGGAGGAGA
AGGAACCTGAGAAGGTGAAGGTCGATGTTGAGACCAATGCGGAAGCTGTT
GACGAGGCCAAAACCACCCAAACCACCGTTTCCGTTGAGATGCCTATCAG
CCTTCCTGAGGCACCGTCTGCTGCCGATACTGAGCAGATGATTGCCAAGG
CGAAAGAAATGGTAGAAGAAGCGGTCAAGCTTCAGACCGAGACGGCAGAG
CCATCGTCGGCCAAGGCAGCCCAGAAGCGCAAGACGGAAGTGCTCAGCGA
AGATGACGAGGAAGAAGATGAAGAAGCCAAGACCCTCCGGGTGAAGAGGG
CCAAGGTTCTGGAGGAGAAGCTGAAGCAGGAGCGTGTGCGGAACCGTGCT
CTTGTTGGTGTTACAGCTGCCTTTGCGCTCGCAGACGTAGCAAAGATGGA
TTCGTCAGTGCTACCGGAATGTTCAAGATTGCCTTCCCTTGGGCAAAGCT
CGATGAAGAACGGTCTGAGCGGGAGTATCTGAAGACCCGGACGGAGACTA
GTGAAGATGAGATCGCCGGCAATGTTTGGATCTCGCCTCTGCTCGACGAT
GAACTTCTCTCGCGCCGTCGTCTGGGAAAGACCAACCTCGCCGTGAAACC
CACCCAGGTTGGCACGTCAAATGCGACAAAGCCTGAAAACCTCGGCCCCT
TCGAGTATGCACACTTGCGCGCGCCGCTGCCTAGAGACCTCAAGGGCTCC
GAGATTTTCCCCTCACACTCGCCTCAACAACATCCCGAAACCTACTTTTT
GATGATGGTGCGCTCACTGCCGAAGAAAAACAACCCTCTCATCCTTGCGG
ACGTGGCTCCTGCTTAGCCTCTATTCCGTATTTCTTCTAGCCCTTGAGCT
AGCAAAGGAGTATCAAATGTACGATTGGGTTAGGGCCCTTCTCGATCCTA
CCGACATCGTTCAAAGTCCCTCGTCCGCGAAGAAGCAAATTACCCCTCCC
CCTCGGTTTGATTTGCCGCCGATCGAAGCCCCGGCCATTCTCACTGCACC
ACGTCTCCGTAGGGGACGGTCCGCTTCTCCAAGCAAGAAGTCGACCTCCC
CACGCAAGCCCCGCCAGACTCGCGCCATGAAAGAGGCCAACGCTGCGGCG
ACCAGTGCTGCCAACGCCAGCCTCCAGTCTTCTTTGGACTTGACGGCTTC
CACAGTGGAGTCGGAATCGGTCACCGGCACCGTTCATCAGAGTGTGGAGG
TGGACGACAACGAGAAGCCCGCTCCTACCCCGAAGAAACCGGCATCAGCA
TCCAAGGCAAAGAGGACGGCTGCTCGGGTGGAAGAGCCCGAGGAGAAGGA
GGAGAAGGAACCTGAGAAGGTGAAGGTCGATGTTGAGACCAATGCGGAAG
CTGTTGACGAGGCCAAAACCACCCAAACCACCGTTTCCGTTGAGATGCCT
ATCAGCCTTCCTGAGGCACCGTCTGCTGCCGATACTGAGCAGATGATTGC
CAAGGCGAAAGAAATGGTAGAAGAAGCGGTCAAGCTTCAGACCGAGACGG
CAGAGCCATCGTCGGCCAAGGCAGCCCAGAAGCGCAAGACGGAAGTGCTC
AGCGAAGATGACGAGGAAGAAGATGAAGAAGCCAAGACCCTCCGGGTGAA
GAGGGCCAAGGTTCTGGAGGAGAAGCTGAAGCAGGAGCGTGTGCGGAACC
GTGCTCTTGTTGGTGTTACAGCTGCCTTTGCGCTCGCAGACGTAGCAAAG
ATGGATTCGTCAGTGCTACCGGAATGTTCAAGATTGCCTTCCCTTGGGCA
AAGCTCGATGAAGAACGGTCTGAGCGGGAGTATCTGAAGACCCGGACGGA
GACTAGTGAAGATGAGATCGCCGGCAATGTTTGGATCTCGCCTCTGCTCG
ACGATGAACTTCTCTCGCGCCGTCGTCTGGGAAAGACCAACCTCGCCGTG
AAACCCACCCAGGTTGGCACGTCAAATGCGACAAAGCCTGAAAACCTCGG
CCCCTTCGAGTATGCACACTTGCGCGCGCCGCTGCCTAGAGACCTCAAGG
GCTCCGAGATTTTCCCCTCACACTCGCCTCAACAACATCCCGAAACCTAC
TTTTTGATGATGGTGCGCTCACTGCCGAAGAAAAACAACCCTCTCATCCT
TGCGGACGTGGCTCCTGCTTAGCCTCTATTCCGTATTTCTTCTAGCCCTT
GAGCTAGCAAAGGAGTATCAAATGTACGATTGGGTTAGGGCCCTTCTCGA
TCCTACCGACATCGTTCAAAGTCCCTCGTCCGCGAAGAAGCAAATTACCC
CTCCCCCTCGGTTTGATTTGCCGCCGATCGAAGCCCCGGCCATTCTCACT
GCACCACGTCTCCGTAGGGGACGGTCCGCTTCTCCAAGCAAGAAGTCGAC
CTCCCCACGCAAGCCCCGCCAGACTCGCGCCATGAAAGAGGCCAACGCTG
CGGCGACCAGTGCTGCCAACGCCAGCCTCCAGTCTTCTTTGGACTTGACG
GCTTCCACAGTGGAGTCGGAATCGGTCACCGGCACCGTTCATCAGAGTGT
GGAGGTGGACGACAACGAGAAGCCCGCTCCTACCCCGAAGAAACCGGCAT
CAGCATCCAAGGCAAAGAGGACGGCTGCTCGGGTGGAAGAGCCCGAGGAG
AAGGAGGAGAAGGAACCTGAGAAGGTGAAGGTCGATGTTGAGACCAATGC
GGAAGCTGTTGACGAGGCCAAAACCACCCAAACCACCGTTTCCGTTGAGA
TGCCTATCAGCCTTCCTGAGGCACCGTCTGCTGCCGATACTGAGCAGATG
ATTGCCAAGGCGAAAGAAATGGTAGAAGAAGCGGTCAAGCTTCAGACCGA
GACGGCAGAGCCATCGTCGGCCAAGGCAGCCCAGAAGCGCAAGACGGAAG
TGCTCAGCGAAGATGACGAGGAAGAAGATGAAGAAGCCAAGACCCTCCGG
GTGAAGAGGGCCAAGGTTCTGGAGGAGAAGCTGAAGCAGGAGCGTGTGCG
GAACCGTGCTCTTGTTGGTGTTACAGCTGCCTTTGCGCTCGCAGACGTAG
CAAAGATGGATTCGTCAGTGCTACCGGAATGTTCAAGATTGCCTTCCCTT
GGGCAAAGCTCGATGAAGAACGGTCTGAGCGGGAGTATCTGAAGACCCGG
ACGGAGACTAGTGAAGATGAGATCGCCGGCAATGTTTGGATCTCGCCTCT
GCTCGACGATGAACTTCTCTCGCGCCGTCGTCTGGGAAAGACCAACCTCG
CCGTGAAACCCACCCAGGTTGGCACGTCAAATGCGACAAAGCCTGAAAAC
CTCGGCCCCTTCGAGTATGCACACTTGCGCGCGCCGCTGCCTAGAGACCT
CAAGGGCTCCGAGATTTTCCCCTCACACTCGCCTCAACAACATCCCGAAA
CCTACTTTTTGATGATGGTGCGCTCACTGCCGAAGAAAAACAACCCTCTC
ATCCTTGCGGACGTGGCTCCTGCTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011602-T1.utr3p1 | KJC3_011602-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011602-T1.utr5p1 | KJC3_011602-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003163 |
| DBxref | InterPro:IPR036887 |
| DBxref | InterPro:IPR018004 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1104791..1107879 - |
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