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KJC3_011605-T1, KJC3_011605-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011605-T1
Unique NameKJC3_011605-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1112520..1115485-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011605-T1 ID=KJC3_011605-T1|Name=KJC3_011605-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2966bp|location=Sequence derived from alignment at ch8:1112520..1115485- (Aspergillus niger KJC3)
GAAAGTAGCCGTTGTTAAGGACGTTACCCAATCGTCATGTCAGCTGCCCG
CCCGCCGCCGCGGAACTCCCAACTTCCTCCAGCTCCCCTCTTTTAGGGAC
AACCCCCCCTCCCCAGGTCTGATTTGTTATTGCGCCTATGCGAAAGACCC
CGGGGCCAAAATGGAGACCATTTCCAGGATATCCACGATGCTGGAAACAG
GTAATGTCACCCCGAGCACAGTTGCTCGCCAATTGTCCTCCGCGTCTGGA
CAAATCGACTAACTGATCGTGCGAGCAGCTCGTGAGCTCACCCTCGAAGC
AGCCCAGTCAGCAGCCCTGAGTAAGGGATCTAGCACGGGTTTATCGTCTC
GGAATTTGGCTACTGCTCACATCAAAAAGCTTCTGGATAGTCGAAATGAC
CGGGAGGTCCTGGATGGCATGCGCCGGGTGATTACGGTAAGGTCCCAAGA
TGCCTAAATGCAAGAGTCCATTGTCTGACGCTCTTTTGATTTTGCGCCAC
ATAGTTGATGTACAGATCCGAACCTTCCCTTCCTTTCTTCTCGGCTGTGG
TCAAAAACGTGGCTAGTGCGAACCTTGAGGTTAAGAAGTTGGTCTACATC
TACTTGGTCCATCATGCGGAGGCGGAACCGGACCTTGCGCTCCTATCTAT
CAATGCTATCCAAAAGTCCCTTACCGATCAGAACCCCCATTCGCGTGCTA
TGGCGCTTCGTACAATGTCGGGAATCAGAGTGCCGGTCATCAGTCAGATT
GTGTCCCTGGCAATCAAGAGAGGCTGCGGCGACATGAGCCCACATGTTCG
CAAAGCCGCAGCATTGGCAATTCCAAAGTGCTATCGCCTGGACCCAAGTA
CCCTCCCTCAGCTGATTGGATATCTTACTACTTTGCTCGGTGATAGCCAG
TACTTCGTCCTTGGGCCTGCTGTCGCCGCTTTCCTGGACGTTTGTCCAGA
CAGGATCGACCTCATCCATAAGCATTACCGAAGCCTTGTCAAAAAGCTCG
TCGACATGGACGAGTGGAGCCAACTCTCGACATTGCGTCTTCTGACCATT
TACGCTAGGAAGTGCTTCCCTCGCAAGGTCCAGAAAGGTAAACAGGCAGT
TTCTGAAGGCTTCTACGAGGACGATAAGACACCGGAGAGCAATGGTGGTG
ATAATGAGCATGAAGTGCTTGTGTTGGATCCTGATCTTGAATTTCTCTTA
CGTACTTGCAAGCTGTTGCTGCAAAATCGCAACTCCGCTGTCATTGTTGG
CGTTGTGCGGTGTTTCCTTTACCTCGGCACTCCCGAGTATCTTGAAGCCG
CCGTTGGTCCTCTGGTTGCGCTGGTTCGGAGCCCACAAGATACGCAGCAT
GTTGCGCTATATAACATCGTCGCCGTTGCCCTGAAACACCCTAAGCCGTT
TACGAGATACACTACGCACTTTTTGGTCCACGCGGTAGATCCGCCTCATA
TCTGGCGCCTCAAGCTGGAAGTGCTCACTTTACTCTTTCCCCACTGCGGG
CTGCACCTGAAGGGTGTGATTCTCAGCGAACTGGAACACTTTTCACAGAG
CACAGACCCAGACCTAGTGCGAGAAAGCGTGCGTGCTATAGGACGCTGCG
CACAGAGTGAGCCTCGAAGTGCTGATCATTGTCTCCGCGTCCTTCTGAGT
CAAATTACGAGTCTTGACGACAACCTTGTTTCAGAGTCCTTGACCGTCAT
CAGACACCTCATCCAGCAGGACCCACCTGCTCACGAGAAGACGGTGATTC
AGCTTGTCAAGCATTTGGGATTAACGAAGAATCCGGATGCTAGAGCAACC
ATTGTTTGGCTGGTCGGAGAATTTGCCGGTGTTGAGCCTGAGAGGAATAT
CGCGGCAGACATCCTGCGCATTCTGGTACAAGACTTTGCAAATGAATCCG
AGGCCGTTAAGCAGCAGATCATCCTTCTGGGTGCTAAGGTATATTTGCAT
CATCTGTTGCGAAACCCTCCAAAGGAAGTGCCTCCACCAGAGCCCAAGCC
TGAAAAAATCGTCAACGAGTGGACGGAGAACGAAGAGGAGCGGAAAGAAG
AATCAGGCGACGAGAAACCGCAGAGTGATGAACCTGAAGAGGACAGGATG
ACGCTGCTCTGGCGGTACCTTCTTCTGCTTGCTCGATATGATACTTCCTA
CGATCTTCGCGACCGAGCCCGTCTATACAAGGCTTTACTCGCTTCTCCTT
CTTCTACACAACTGGCCAATCTGCTATTACTTGCGCCAAAGCCTGTTCCA
CACGCTCCGAGCCCGTCAGAAACACGCAAGGACCTGCTGATAGGCTCCTC
AACCCTCGTTGTTGGTCCCGACGCTGGCATGCTTGGCTTGAAGGGCTATC
AAAACCTCCCTGAATGGGTTGAGTTCGGACAAGAACCCGACCCTCGCCTC
CGGGAGAACGATATCAAACCAAGCGTGGTAGAAAAGTCGTCCATGACTGC
GGGCGAGAGGCTCGACCGAGCCCTTAAGGAGCATGAAAGTACCGCTGCAA
CTTCAAGCAGGCAACGGGATGGTCGCGGAGTAGCGGGTGCCTCCTCAGCG
AAGGGGAAGTCACTCGACCAGTGGCTTGAGGAGCCCGAGACGGAAACTGA
GGAAGAGACAGAAACTGAGGAAGAGGTGACTGACTCTGAATACGAGGAAG
TTACGGACGAGGAAACGGACGAAGAGGAGGAAACGGATGAAGAATATGAG
ACGGACGAAGAAGAGCAGGGACAGAGTGCAGGACTCTTGAAGCCGTGATA
CCCAATTGGAGAGATGGGAAGAGTATTTGTACAGATTAGCTGCATAGACC
ATGAACGCGATATACTTCCAATTCTAGACGTGACGGTTTGCACTCCGTAA
TCGGATACTTCACTCCGGTACAGAAAATGGATGCGAACAAGAGATATTTT
GCACTTCCGAAGCACCAGGGTGTAACAAGGTCGTGCAAAATGTAGCCTTC
TGATGGTTATTTACCC
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Coding sequence (CDS) from alignment at ch8:1112520..1115485-

>KJC3_011605-T1 ID=KJC3_011605-T1|Name=KJC3_011605-T1|organism=Aspergillus niger KJC3|type=CDS|length=4524bp|location=Sequence derived from alignment at ch8:1112520..1115485- (Aspergillus niger KJC3)
TTGATGTACAGATCCGAACCTTCCCTTCCTTTCTTCTCGGCTGTGGTCAA
AAACGTGGCTAGTGCGAACCTTGAGGTTAAGAAGTTGGTCTACATCTACT
TGGTCCATCATGCGGAGGCGGAACCGGACCTTGCGCTCCTATCTATCAAT
GCTATCCAAAAGTCCCTTACCGATCAGAACCCCCATTCGCGTGCTATGGC
GCTTCGTACAATGTCGGGAATCAGAGTGCCGGTCATCAGTCAGATTGTGT
CCCTGGCAATCAAGAGAGGCTGCGGCGACATGAGCCCACATGTTCGCAAA
GCCGCAGCATTGGCAATTCCAAAGTGCTATCGCCTGGACCCAAGTACCCT
CCCTCAGCTGATTGGATATCTTACTACTTTGCTCGGTGATAGCCAGTACT
TCGTCCTTGGGCCTGCTGTCGCCGCTTTCCTGGACGTTTGTCCAGACAGG
ATCGACCTCATCCATAAGCATTACCGAAGCCTTGTCAAAAAGCTCGTCGA
CATGGACGAGTGGAGCCAACTCTCGACATTGCGTCTTCTGACCATTTACG
CTAGGAAGTGCTTCCCTCGCAAGGTCCAGAAAGGTAAACAGGCAGTTTCT
GAAGGCTTCTACGAGGACGATAAGACACCGGAGAGCAATGGTGGTGATAA
TGAGCATGAAGTGCTTGTGTTGGATCCTGATCTTGAATTTCTCTTACGTA
CTTGCAAGCTGTTGCTGCAAAATCGCAACTCCGCTGTCATTGTTGGCGTT
GTGCGGTGTTTCCTTTACCTCGGCACTCCCGAGTATCTTGAAGCCGCCGT
TGGTCCTCTGGTTGCGCTGGTTCGGAGCCCACAAGATACGCAGCATGTTG
CGCTATATAACATCGTCGCCGTTGCCCTGAAACACCCTAAGCCGTTTACG
AGATACACTACGCACTTTTTGGTCCACGCGGTAGATCCGCCTCATATCTG
GCGCCTCAAGCTGGAAGTGCTCACTTTACTCTTTCCCCACTGCGGGCTGC
ACCTGAAGGGTGTGATTCTCAGCGAACTGGAACACTTTTCACAGAGCACA
GACCCAGACCTAGTGCGAGAAAGCGTGCGTGCTATAGGACGCTGCGCACA
GAGTGAGCCTCGAAGTGCTGATCATTGTCTCCGCGTCCTTCTGAGTCAAA
TTACGAGTCTTGACGACAACCTTGTTTCAGAGTCCTTGACCGTCATCAGA
CACCTCATCCAGCAGGACCCACCTGCTCACGAGAAGACGGTGATTCAGCT
TGTCAAGCATTTGGGATTAACGAAGAATCCGGATGCTAGAGCAACCATTG
TTTGGCTGGTCGGAGAATTTGCCGGTGTTGAGCCTGAGAGGAATATCGCG
GCAGACATCCTGCGCATTCTGGTACAAGACTTTGCAAATGAATCCGAGGC
CGTTAAGCAGCAGATCATCCTTCTGGGTGCTAAGGTATATTTGCATCATC
TGTTGCGAAACCCTCCAAAGGAAGTGCCTCCACCAGAGCCCAAGCCTGAA
AAAATCGTCAACGAGTGGACGGAGAACGAAGAGGAGCGGAAAGAAGAATC
AGGCGACGAGAAACCGCAGAGTGATGAACCTGAAGAGGACAGGATGACGC
TGCTCTGGCGGTACCTTCTTCTGCTTGCTCGATATGATACTTCCTACGAT
CTTCGCGACCGAGCCCGTCTATACAAGGCTTTACTCGCTTCTCCTTCTTC
TACACAACTGGCCAATCTGCTATTACTTGCGCCAAAGCCTGTTCCACACG
CTCCGAGCCCGTCAGAAACACGCAAGGACCTGCTGATAGGCTCCTCAACC
CTCGTTGTTGGTCCCGACGCTGGCATGCTTGGCTTGAAGGGCTATCAAAA
CCTCCCTGAATGGGTTGAGTTCGGACAAGAACCCGACCCTCGCCTCCGGG
AGAACGATATCAAACCAAGCGTGGTAGAAAAGTCGTCCATGACTGCGGGC
GAGAGGCTCGACCGAGCCCTTAAGGAGCATGAAAGTACCGCTGCAACTTC
AAGCAGGCAACGGGATGGTCGCGGAGTAGCGGGTGCCTCCTCAGCGAAGG
GGAAGTCACTCGACCAGTGGCTTGAGGAGCCCGAGACGGAAACTGAGGAA
GAGACAGAAACTGAGGAAGAGGTGACTGACTCTGAATACGAGGAAGTTAC
GGACGAGGAAACGGACGAAGAGGAGGAAACGGATGAAGAATATGAGACGG
ACGAAGAAGAGCAGGGACAGAGTGCAGGACTCTTGAAGCCGTGAATGCGC
CGGGTGATTACGTTGATGTACAGATCCGAACCTTCCCTTCCTTTCTTCTC
GGCTGTGGTCAAAAACGTGGCTAGTGCGAACCTTGAGGTTAAGAAGTTGG
TCTACATCTACTTGGTCCATCATGCGGAGGCGGAACCGGACCTTGCGCTC
CTATCTATCAATGCTATCCAAAAGTCCCTTACCGATCAGAACCCCCATTC
GCGTGCTATGGCGCTTCGTACAATGTCGGGAATCAGAGTGCCGGTCATCA
GTCAGATTGTGTCCCTGGCAATCAAGAGAGGCTGCGGCGACATGAGCCCA
CATGTTCGCAAAGCCGCAGCATTGGCAATTCCAAAGTGCTATCGCCTGGA
CCCAAGTACCCTCCCTCAGCTGATTGGATATCTTACTACTTTGCTCGGTG
ATAGCCAGTACTTCGTCCTTGGGCCTGCTGTCGCCGCTTTCCTGGACGTT
TGTCCAGACAGGATCGACCTCATCCATAAGCATTACCGAAGCCTTGTCAA
AAAGCTCGTCGACATGGACGAGTGGAGCCAACTCTCGACATTGCGTCTTC
TGACCATTTACGCTAGGAAGTGCTTCCCTCGCAAGGTCCAGAAAGGTAAA
CAGGCAGTTTCTGAAGGCTTCTACGAGGACGATAAGACACCGGAGAGCAA
TGGTGGTGATAATGAGCATGAAGTGCTTGTGTTGGATCCTGATCTTGAAT
TTCTCTTACGTACTTGCAAGCTGTTGCTGCAAAATCGCAACTCCGCTGTC
ATTGTTGGCGTTGTGCGGTGTTTCCTTTACCTCGGCACTCCCGAGTATCT
TGAAGCCGCCGTTGGTCCTCTGGTTGCGCTGGTTCGGAGCCCACAAGATA
CGCAGCATGTTGCGCTATATAACATCGTCGCCGTTGCCCTGAAACACCCT
AAGCCGTTTACGAGATACACTACGCACTTTTTGGTCCACGCGGTAGATCC
GCCTCATATCTGGCGCCTCAAGCTGGAAGTGCTCACTTTACTCTTTCCCC
ACTGCGGGCTGCACCTGAAGGGTGTGATTCTCAGCGAACTGGAACACTTT
TCACAGAGCACAGACCCAGACCTAGTGCGAGAAAGCGTGCGTGCTATAGG
ACGCTGCGCACAGAGTGAGCCTCGAAGTGCTGATCATTGTCTCCGCGTCC
TTCTGAGTCAAATTACGAGTCTTGACGACAACCTTGTTTCAGAGTCCTTG
ACCGTCATCAGACACCTCATCCAGCAGGACCCACCTGCTCACGAGAAGAC
GGTGATTCAGCTTGTCAAGCATTTGGGATTAACGAAGAATCCGGATGCTA
GAGCAACCATTGTTTGGCTGGTCGGAGAATTTGCCGGTGTTGAGCCTGAG
AGGAATATCGCGGCAGACATCCTGCGCATTCTGGTACAAGACTTTGCAAA
TGAATCCGAGGCCGTTAAGCAGCAGATCATCCTTCTGGGTGCTAAGGTAT
ATTTGCATCATCTGTTGCGAAACCCTCCAAAGGAAGTGCCTCCACCAGAG
CCCAAGCCTGAAAAAATCGTCAACGAGTGGACGGAGAACGAAGAGGAGCG
GAAAGAAGAATCAGGCGACGAGAAACCGCAGAGTGATGAACCTGAAGAGG
ACAGGATGACGCTGCTCTGGCGGTACCTTCTTCTGCTTGCTCGATATGAT
ACTTCCTACGATCTTCGCGACCGAGCCCGTCTATACAAGGCTTTACTCGC
TTCTCCTTCTTCTACACAACTGGCCAATCTGCTATTACTTGCGCCAAAGC
CTGTTCCACACGCTCCGAGCCCGTCAGAAACACGCAAGGACCTGCTGATA
GGCTCCTCAACCCTCGTTGTTGGTCCCGACGCTGGCATGCTTGGCTTGAA
GGGCTATCAAAACCTCCCTGAATGGGTTGAGTTCGGACAAGAACCCGACC
CTCGCCTCCGGGAGAACGATATCAAACCAAGCGTGGTAGAAAAGTCGTCC
ATGACTGCGGGCGAGAGGCTCGACCGAGCCCTTAAGGAGCATGAAAGTAC
CGCTGCAACTTCAAGCAGGCAACGGGATGGTCGCGGAGTAGCGGGTGCCT
CCTCAGCGAAGGGGAAGTCACTCGACCAGTGGCTTGAGGAGCCCGAGACG
GAAACTGAGGAAGAGACAGAAACTGAGGAAGAGGTGACTGACTCTGAATA
CGAGGAAGTTACGGACGAGGAAACGGACGAAGAGGAGGAAACGGATGAAG
AATATGAGACGGACGAAGAAGAGCAGGGACAGAGTGCAGGACTCTTGAAG
CCGTGAATGCGCCGGGTGATTACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030117membrane coat
Vocabulary: Molecular Function
TermDefinition
GO:0030276clathrin binding
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011605KJC3_011605Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011605-T1KJC3_011605-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011605-T1.cdsKJC3_011605-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011605-T1.utr3p1KJC3_011605-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011605-T1.exon4KJC3_011605-T1.exon4Aspergillus niger KJC3exon
KJC3_011605-T1.exon3KJC3_011605-T1.exon3Aspergillus niger KJC3exon
KJC3_011605-T1.exon2KJC3_011605-T1.exon2Aspergillus niger KJC3exon
KJC3_011605-T1.exon1KJC3_011605-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011605-T1.utr5p3KJC3_011605-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_011605-T1.utr5p2KJC3_011605-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_011605-T1.utr5p1KJC3_011605-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09260VHV
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR016342
DBxrefInterPro:IPR002553
DBxrefPFAM:PF12717
DBxrefPFAM:PF01602
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1112520..1115485 -
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