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KJC3_011633-T1, KJC3_011633-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011633-T1
Unique NameKJC3_011633-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1183118..1185987-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011633-T1 ID=KJC3_011633-T1|Name=KJC3_011633-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2870bp|location=Sequence derived from alignment at ch8:1183118..1185987- (Aspergillus niger KJC3)
CTCACTTACTCGACCGAAGCACATCGACAACCACCCCATCGACCTGCCGC
TCACCGGGACTTTCACAATGAAGTGTTAGTGAAATGCTGCATCACCTCGA
CTCTTGATTTTTCTCGTCTTCGAATCCAAACTGACAGGATGTTACGATAG
TCATGAAAGTGGGCCGTGTGGCCATCATCACCCGTGGCCGTTACGCCGGT
AAGAAGGTACGACAACCGATTTCTTCATTTTCTGGCGAGGAGATACATAT
ATATATACCCCGAGGTGGAATGGATTGGAAGGAATGATTTTTTGCCGACT
CGAAGGAAATGAATTTTCGATTTGCATGGGAATAAAACAATCGAGCGGAA
ACGCGAATGATGGGCGAACTACCATGGGGGCAAAAGCGAACGGAATGTGC
AAGGATATATGTGCTGACGAGGGTTTCTTTTCGCGAATGACAGGTCGTCA
TTGTCCAGCCTAACGACACTGGCTCCAAGGCGCACCCCTTCCCTTACGCC
ATCGTCGCCGGTATCGAGCGCTACCCCCTCAAGGTCACCCGCCGCATGGG
TAAGAAGACCGTCGAGAAGCGCAGCCGCATCAAGCCCTTCATCAAGGTCG
TCAACTACAACCACTTGATGCCCACTCGCTACACCCTTGAGCTCGAGGGT
CTTAAGGGTGCCGTCTCCACCGAGACCTTCAAGGAGGTTTCCACCCGCGA
GGACGCCAAGAAGAACGTCAAGAAGGCCCTTGAGGACCGCTACACCAGCG
GCAAGAACCGTTGGTTCTTCACTCCTCTGCGTACGTTTTGCCATCCATTG
CTTTTTGCCTACGTTGGCTGGATTAAGGTTCGCAATGCTGACGGTTCTAC
AGGTTTCTAAACGGGGTAATATGGGGCGTTTTGTCGTTTGAGCGCGCAGG
GTCTTAGATGAGGCAAAGGGAAAAAGAAAAAGCATCGAAGACGTCCGGTT
CAAAAGCATGGGATCACGTGAAGTATACCATAGCACGAGAGAAGAATGGG
AATGTATCGATGTACAGGTCCAGGACTTGACCAATTTTTCTTATCATGAG
GGAGGCCACTCAGATCTGGCGTCCGTCTCGAAATGAAATGGAAAATATGA
ACAAATTCAACTTTTTTTTTGTGTTTCGGAATTCTCGGCTTCCAGGGGTT
TCTTCCTCTACAACAAAGCATGCTACAACCTAGCGCACACAAAGGCCGCG
TCCGTATTACACCAACCGGTCAGGTCGGAAAAGATTATCAAATGTCCGAA
AACACCACGATCGCTCTATCATTCCAATCGAACACACTATCCATCACCTT
TGGACGAAAGAATCCTATCGAATCATCCGACATCATGGGCCCTTCCAAGT
TTCCCCTGTTGGCCAGTCTTACGAGGTAAGGGTACATATGTGTCGGTCTG
ATCTAGATTTGGAAACCTACTTCCGTCAACCCACCGAGCTTGTGCTTCCA
ACCCCCGCACGGCCGATATTCCCCGTACATGAAATCCCAGTCTATCCCAC
ATTGTTGGGGTAAAAGCGGAGCTCCATGGAGGAGCACAAACCCCCACCTG
TAAGAAAGATAGCCCCTAAGATAGGTCTGGGGTTATGTCATATCTCGTAG
ATACGGTGCTCCTCCTTTGGCTCCGTCCAACATACGTAGTGGCGGTTTAC
TGCAAGGAGACCATGTTCACTAGCGAATGTAGCACGGATGAGGTTGCCCC
TAAGTCGAAATGACAGTAGCACCGGCTTCTGCGTCTGAACCAAACGAGCT
AGGTACCAGAAAGGTAGGTGTAGCGCCAACCGGTGCTGGCAAGGTACATG
GGGCCCCATGTAGCCTTGGAAATGAGGAGGTGCAATTAGAGGTCGCGATC
TGTGCACGTCGTTCCTTACCCGAGAGAGGGAGTAGCCGTCTAGGCGTGCG
ACAATCCCTCAGTTCCGGCTGTCGATGATGGCCGGGTATTTTACAATCCT
GACAGAATAGTAACCAACTAGGATGGTTAAAGCTGCCGATGAGAATGAGA
ATCCTTCAGGACATGTGAAAAGCCATTGGTTGTTGTAATCTACGCGGCCG
GCGAATGCAGCAAGCAAGCCACCAGGAGTTGGCCGTCCAGGTTGTTGGCG
CCTTCTATGTCAATCTGCTTCCGATCGCTGGGGTTGAGGAGAAACTGTGG
TGGTGTTGAAGGAAGGAAGGACCTTACGTCCAGACTGTGTGTCGACGATT
AAAACAGACGTTAAGCACAAAGGCACTGCATTGTGTGCTTCAATACGTCA
AAGTTGATCGGGATCGAGGTTTATGAACTGACCTCCGGGAAGACTAGCGT
CGACCGACATGCCGCAGAAGGACAATCAGACAGCATTGGAAGGTCCAGCA
CGGTGCGACCATTTTCGCATGGACAGAAGTACGACGCACATGGTCAGCAC
TAGAAGAGACTGGGCTGGAGAGCGAAGACCGTGGATGCTACTCCAATGGG
GACAGATTCTGTAGAAGCTTGCTCAGATCTGGACAGCACTTGCAGGACTA
CCACCGCACGGTTGGCGTTGTTAGCGCCCAAAAGACGAGTGGATCAAGCT
AAACCCCTCTCTAACCCAGAATATACGGAGCAGTCTGGATAGTAAGATGT
CTTCCACGGAGAAGGTTGATGGTCCAGAGGGCCAAAGGGTCAAAGATGCC
TCTAACCCCGGACCTGAGACGAGGTCCAGGCGCAAAGATGATGCTTGCAC
CTTCCCGCAGGAGATCAACGAGAGCGGTTACCCATCTGGTACAAAAGCGA
AGGCAGGGGGAAAGCAGTAGTCCGTTTGCCGGACGTACTGATCCTCAACG
TTTACCCTCCAGCCGGTTGCTTCCTGAGTCTAGTAGTACTCCGCATCGTT
GGGGTGATTTTGGGGGGACC
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Coding sequence (CDS) from alignment at ch8:1183118..1185987-

>KJC3_011633-T1 ID=KJC3_011633-T1|Name=KJC3_011633-T1|organism=Aspergillus niger KJC3|type=CDS|length=1440bp|location=Sequence derived from alignment at ch8:1183118..1185987- (Aspergillus niger KJC3)
GTCGTCATTGTCCAGCCTAACGACACTGGCTCCAAGGCGCACCCCTTCCC
TTACGCCATCGTCGCCGGTATCGAGCGCTACCCCCTCAAGGTCACCCGCC
GCATGGGTAAGAAGACCGTCGAGAAGCGCAGCCGCATCAAGCCCTTCATC
AAGGTCGTCAACTACAACCACTTGATGCCCACTCGCTACACCCTTGAGCT
CGAGGGTCTTAAGGGTGCCGTCTCCACCGAGACCTTCAAGGAGGTTTCCA
CCCGCGAGGACGCCAAGAAGAACGTCAAGAAGGCCCTTGAGGACCGCTAC
ACCAGCGGCAAGAACCGTTGGTTCTTCACTCCTCTGCGTACGTTTTGCCA
TCCATTGCTTTTTGCCTACGTTGGCTGGATTAAGGTTCGCAATGCTGACG
GTTCTACAGGTTTCTAATCATGAAAGTGGGCCGTGTGGCCATCATCACCC
GTGGCCGTTACGCCGGTAAGAAGATGAAGTGTCGTCATTGTCCAGCCTAA
CGACACTGGCTCCAAGGCGCACCCCTTCCCTTACGCCATCGTCGCCGGTA
TCGAGCGCTACCCCCTCAAGGTCACCCGCCGCATGGGTAAGAAGACCGTC
GAGAAGCGCAGCCGCATCAAGCCCTTCATCAAGGTCGTCAACTACAACCA
CTTGATGCCCACTCGCTACACCCTTGAGCTCGAGGGTCTTAAGGGTGCCG
TCTCCACCGAGACCTTCAAGGAGGTTTCCACCCGCGAGGACGCCAAGAAG
AACGTCAAGAAGGCCCTTGAGGACCGCTACACCAGCGGCAAGAACCGTTG
GTTCTTCACTCCTCTGCGTACGTTTTGCCATCCATTGCTTTTTGCCTACG
TTGGCTGGATTAAGGTTCGCAATGCTGACGGTTCTACAGGTTTCTAATCA
TGAAAGTGGGCCGTGTGGCCATCATCACCCGTGGCCGTTACGCCGGTAAG
AAGATGAAGTGTCGTCATTGTCCAGCCTAACGACACTGGCTCCAAGGCGC
ACCCCTTCCCTTACGCCATCGTCGCCGGTATCGAGCGCTACCCCCTCAAG
GTCACCCGCCGCATGGGTAAGAAGACCGTCGAGAAGCGCAGCCGCATCAA
GCCCTTCATCAAGGTCGTCAACTACAACCACTTGATGCCCACTCGCTACA
CCCTTGAGCTCGAGGGTCTTAAGGGTGCCGTCTCCACCGAGACCTTCAAG
GAGGTTTCCACCCGCGAGGACGCCAAGAAGAACGTCAAGAAGGCCCTTGA
GGACCGCTACACCAGCGGCAAGAACCGTTGGTTCTTCACTCCTCTGCGTA
CGTTTTGCCATCCATTGCTTTTTGCCTACGTTGGCTGGATTAAGGTTCGC
AATGCTGACGGTTCTACAGGTTTCTAATCATGAAAGTGGGCCGTGTGGCC
ATCATCACCCGTGGCCGTTACGCCGGTAAGAAGATGAAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL27AKJC3_011633Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011633-T1KJC3_011633-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011633-T1.cdsKJC3_011633-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011633-T1.utr3p1KJC3_011633-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011633-T1.exon3KJC3_011633-T1.exon3Aspergillus niger KJC3exon
KJC3_011633-T1.exon2KJC3_011633-T1.exon2Aspergillus niger KJC3exon
KJC3_011633-T1.exon1KJC3_011633-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011633-T1.utr5p1KJC3_011633-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR041991
DBxrefInterPro:IPR038655
DBxrefInterPro:IPR001141
DBxrefPFAM:PF01777
Product60S ribosomal protein L27A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1183118..1185987 -
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