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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1196182..1198245- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011636-T1 ID=KJC3_011636-T1|Name=KJC3_011636-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2064bp|location=Sequence derived from alignment at ch8:1196182..1198245- (Aspergillus niger KJC3)
CAGCAATACACGCCCATCTCTCCGGCCCTGCGCGGTCTGTCTCATCGCCC
CAAGGATCTCCATCCTCCAATTCGCGGATCTTCCCTTGCGGCCTCACCGT
CTCATCACGGACCAACCATGAATGCCCAGATCCCACCCAACTACGGCCGT
GGGTTCCCCCCACAAGCCGCCCAACGCTCCCCTGCCACGCCTCGTCGCGG
TCCTCCAGGTCCTGGTGAGCCTCCACCCTTTAACCCAATCAAACCCCGGC
GGAACTATTTCTTCTAACTCCTTCTCCCTCGTATAGCTGCTGCGATGCCT
GTCCCCATGCCTCAGCACGCCGTTCCACCTCAATACATCCCTCCCCAGCG
CAACATGCAGCCTCCCAATGACGCCGCCCTGCGTCGCAGCCGCAAACCCA
CCGACAAGAACATCCCCGACGGCATTGAGGAAGTAATTATCGGCGAAGGT
GTGCAGCAGTACAAGAGCCTCCGCGACCTGGAGAAACGCCTCGATGCAGC
CATTGTCCGTAAGCGCCTGGACATCCAAGACTCCATCAGCAAGACTGTCA
AGAAGTACCGCACGATGCGCATTTGGATCTCGAACACTGTCGAAAACCAA
CCCTGGCAGACTGCCAACGGTGCCGCCCCCGGAAGCAACCCCGGCTCCGG
ACGGTACAAGGTACGCATCGAGGGACGTCTTCTGGACGACGACACCGACC
CGACCGCCCCGGAGGATAGTGACGACGAAGCTACCGAGCAGACGGACAAC
GGCGACGCGATGGAGCAAGATGGACCTAACGCCAATGCCACTACCAAAAA
GTCGTCCAACAAGCGCACCAAGCAGCGCTTCTCGCACTTCTTCAAATCCA
TTACCGTCGACTTCGATAAGTCCTCCACCGCCAGCCCGGAAGAAGTCAAG
CCAATCACCTGGACCAAACCGCAATTACCCCCTAACACTGTCACTCTGCC
GCCCACAGCAGACTTCGACTCGATGCAGTTCACCCGCGCGTCACAGGAGA
ACCTGAACGTGACATTCAGTCTCGTGCGCGACGAGACACCAGAACGGTTC
AAGCTAAGCAAAGAGCTAGCAGAAGTACTAGACGTAGAGGAAGAAACACG
AAGCGGCATTGTTCTCGGAATCTGGGACTACATCCGTGCCATGGGCCTTC
AAGAAGATGAAGAGAAGCGACTCGTCCGCTGTGACCATCGTCTACGATCG
GTACCTCCCCTCCCCATCCCCATCCCCATTCCCGATATAATCCAAGACTA
ACCCGACCCAACCGCGCAGATCTTCGGCCGCGACCAAATGTTCTTCCCTC
AAATCCCCGAAAGCATCGGCCCTCACACCAGCCCCATTGACCCCATCCAC
CTCCCCTACACCATCCGCGTCGACGAAGACTACCACAAGGACCCGACCCC
TACCGTCTACGACATCCAAGTCGCCCTGGAAGACCCTCTCCGCTCCAAGA
TGCTCGCCCTCACCCAGAACCCGCAATACACGGCCTCCATGCGCCAGATC
GCCACGCTAGACGACCAGGTCGCCCTCATCGTGCAAGCCCTGACGCACTC
CCGCGCCCGTCACTCCTTCTACACGGCTCTCAGCAAGGATCCCGCTACGT
TCGTCCGCCGCTGGATCAATTCCCAGCGCAGAGACTTGGAGACTATTCTT
GGAGAGGCGACGCGTGGTGGTGGCGAAGATGCTAGTGGGCCTGAGTTCCG
TCGTGGTGGTACGGATGGCGTTTGGGATACTACTGTGGCGAGGGAAGCGG
TGCGGTATATGCTTGCTAAGCCGGAGGCGGCGATGGGGAGGTGATTCTTG
AACTAGGTAGTTGACAGGGTAGATTGTTGGTGATGGTGTGGTATTAAGTC
GGTGATATGACATGTGTATTATTTTGGAATGTGGTTGGTGATCAGCGAAG
AAAATAACTTACGAACGATACTAGTTTAGTTAGTCGATTAAGTAGGGCTT
GTTTGATGGGGGCGCTTTCGTGGTGTTTTGTCTTGGTTGGTTTTGATTTC
GGGATGGTTGCTTCTTTCAGCTCTTTTAGTTCCCTTGTCATCAATAATGT
ATTCAGTTGCTTTA back to topCoding sequence (CDS) from alignment at ch8:1196182..1198245- >KJC3_011636-T1 ID=KJC3_011636-T1|Name=KJC3_011636-T1|organism=Aspergillus niger KJC3|type=CDS|length=4608bp|location=Sequence derived from alignment at ch8:1196182..1198245- (Aspergillus niger KJC3)
ATCTTCGGCCGCGACCAAATGTTCTTCCCTCAAATCCCCGAAAGCATCGG
CCCTCACACCAGCCCCATTGACCCCATCCACCTCCCCTACACCATCCGCG
TCGACGAAGACTACCACAAGGACCCGACCCCTACCGTCTACGACATCCAA
GTCGCCCTGGAAGACCCTCTCCGCTCCAAGATGCTCGCCCTCACCCAGAA
CCCGCAATACACGGCCTCCATGCGCCAGATCGCCACGCTAGACGACCAGG
TCGCCCTCATCGTGCAAGCCCTGACGCACTCCCGCGCCCGTCACTCCTTC
TACACGGCTCTCAGCAAGGATCCCGCTACGTTCGTCCGCCGCTGGATCAA
TTCCCAGCGCAGAGACTTGGAGACTATTCTTGGAGAGGCGACGCGTGGTG
GTGGCGAAGATGCTAGTGGGCCTGAGTTCCGTCGTGGTGGTACGGATGGC
GTTTGGGATACTACTGTGGCGAGGGAAGCGGTGCGGTATATGCTTGCTAA
GCCGGAGGCGGCGATGGGGAGGTGACTGCTGCGATGCCTGTCCCCATGCC
TCAGCACGCCGTTCCACCTCAATACATCCCTCCCCAGCGCAACATGCAGC
CTCCCAATGACGCCGCCCTGCGTCGCAGCCGCAAACCCACCGACAAGAAC
ATCCCCGACGGCATTGAGGAAGTAATTATCGGCGAAGGTGTGCAGCAGTA
CAAGAGCCTCCGCGACCTGGAGAAACGCCTCGATGCAGCCATTGTCCGTA
AGCGCCTGGACATCCAAGACTCCATCAGCAAGACTGTCAAGAAGTACCGC
ACGATGCGCATTTGGATCTCGAACACTGTCGAAAACCAACCCTGGCAGAC
TGCCAACGGTGCCGCCCCCGGAAGCAACCCCGGCTCCGGACGGTACAAGG
TACGCATCGAGGGACGTCTTCTGGACGACGACACCGACCCGACCGCCCCG
GAGGATAGTGACGACGAAGCTACCGAGCAGACGGACAACGGCGACGCGAT
GGAGCAAGATGGACCTAACGCCAATGCCACTACCAAAAAGTCGTCCAACA
AGCGCACCAAGCAGCGCTTCTCGCACTTCTTCAAATCCATTACCGTCGAC
TTCGATAAGTCCTCCACCGCCAGCCCGGAAGAAGTCAAGCCAATCACCTG
GACCAAACCGCAATTACCCCCTAACACTGTCACTCTGCCGCCCACAGCAG
ACTTCGACTCGATGCAGTTCACCCGCGCGTCACAGGAGAACCTGAACGTG
ACATTCAGTCTCGTGCGCGACGAGACACCAGAACGGTTCAAGCTAAGCAA
AGAGCTAGCAGAAGTACTAGACGTAGAGGAAGAAACACGAAGCGGCATTG
TTCTCGGAATCTGGGACTACATCCGTGCCATGGGCCTTCAAGAAGATGAA
GAGAAGCGACTCGTCCGCTGTGACCATCGTCTACGATCGATGAATGCCCA
GATCCCACCCAACTACGGCCGTGGGTTCCCCCCACAAGCCGCCCAACGCT
CCCCTGCCACGCCTCGTCGCGGTCCTCCAGGTCCTGATCTTCGGCCGCGA
CCAAATGTTCTTCCCTCAAATCCCCGAAAGCATCGGCCCTCACACCAGCC
CCATTGACCCCATCCACCTCCCCTACACCATCCGCGTCGACGAAGACTAC
CACAAGGACCCGACCCCTACCGTCTACGACATCCAAGTCGCCCTGGAAGA
CCCTCTCCGCTCCAAGATGCTCGCCCTCACCCAGAACCCGCAATACACGG
CCTCCATGCGCCAGATCGCCACGCTAGACGACCAGGTCGCCCTCATCGTG
CAAGCCCTGACGCACTCCCGCGCCCGTCACTCCTTCTACACGGCTCTCAG
CAAGGATCCCGCTACGTTCGTCCGCCGCTGGATCAATTCCCAGCGCAGAG
ACTTGGAGACTATTCTTGGAGAGGCGACGCGTGGTGGTGGCGAAGATGCT
AGTGGGCCTGAGTTCCGTCGTGGTGGTACGGATGGCGTTTGGGATACTAC
TGTGGCGAGGGAAGCGGTGCGGTATATGCTTGCTAAGCCGGAGGCGGCGA
TGGGGAGGTGACTGCTGCGATGCCTGTCCCCATGCCTCAGCACGCCGTTC
CACCTCAATACATCCCTCCCCAGCGCAACATGCAGCCTCCCAATGACGCC
GCCCTGCGTCGCAGCCGCAAACCCACCGACAAGAACATCCCCGACGGCAT
TGAGGAAGTAATTATCGGCGAAGGTGTGCAGCAGTACAAGAGCCTCCGCG
ACCTGGAGAAACGCCTCGATGCAGCCATTGTCCGTAAGCGCCTGGACATC
CAAGACTCCATCAGCAAGACTGTCAAGAAGTACCGCACGATGCGCATTTG
GATCTCGAACACTGTCGAAAACCAACCCTGGCAGACTGCCAACGGTGCCG
CCCCCGGAAGCAACCCCGGCTCCGGACGGTACAAGGTACGCATCGAGGGA
CGTCTTCTGGACGACGACACCGACCCGACCGCCCCGGAGGATAGTGACGA
CGAAGCTACCGAGCAGACGGACAACGGCGACGCGATGGAGCAAGATGGAC
CTAACGCCAATGCCACTACCAAAAAGTCGTCCAACAAGCGCACCAAGCAG
CGCTTCTCGCACTTCTTCAAATCCATTACCGTCGACTTCGATAAGTCCTC
CACCGCCAGCCCGGAAGAAGTCAAGCCAATCACCTGGACCAAACCGCAAT
TACCCCCTAACACTGTCACTCTGCCGCCCACAGCAGACTTCGACTCGATG
CAGTTCACCCGCGCGTCACAGGAGAACCTGAACGTGACATTCAGTCTCGT
GCGCGACGAGACACCAGAACGGTTCAAGCTAAGCAAAGAGCTAGCAGAAG
TACTAGACGTAGAGGAAGAAACACGAAGCGGCATTGTTCTCGGAATCTGG
GACTACATCCGTGCCATGGGCCTTCAAGAAGATGAAGAGAAGCGACTCGT
CCGCTGTGACCATCGTCTACGATCGATGAATGCCCAGATCCCACCCAACT
ACGGCCGTGGGTTCCCCCCACAAGCCGCCCAACGCTCCCCTGCCACGCCT
CGTCGCGGTCCTCCAGGTCCTGATCTTCGGCCGCGACCAAATGTTCTTCC
CTCAAATCCCCGAAAGCATCGGCCCTCACACCAGCCCCATTGACCCCATC
CACCTCCCCTACACCATCCGCGTCGACGAAGACTACCACAAGGACCCGAC
CCCTACCGTCTACGACATCCAAGTCGCCCTGGAAGACCCTCTCCGCTCCA
AGATGCTCGCCCTCACCCAGAACCCGCAATACACGGCCTCCATGCGCCAG
ATCGCCACGCTAGACGACCAGGTCGCCCTCATCGTGCAAGCCCTGACGCA
CTCCCGCGCCCGTCACTCCTTCTACACGGCTCTCAGCAAGGATCCCGCTA
CGTTCGTCCGCCGCTGGATCAATTCCCAGCGCAGAGACTTGGAGACTATT
CTTGGAGAGGCGACGCGTGGTGGTGGCGAAGATGCTAGTGGGCCTGAGTT
CCGTCGTGGTGGTACGGATGGCGTTTGGGATACTACTGTGGCGAGGGAAG
CGGTGCGGTATATGCTTGCTAAGCCGGAGGCGGCGATGGGGAGGTGACTG
CTGCGATGCCTGTCCCCATGCCTCAGCACGCCGTTCCACCTCAATACATC
CCTCCCCAGCGCAACATGCAGCCTCCCAATGACGCCGCCCTGCGTCGCAG
CCGCAAACCCACCGACAAGAACATCCCCGACGGCATTGAGGAAGTAATTA
TCGGCGAAGGTGTGCAGCAGTACAAGAGCCTCCGCGACCTGGAGAAACGC
CTCGATGCAGCCATTGTCCGTAAGCGCCTGGACATCCAAGACTCCATCAG
CAAGACTGTCAAGAAGTACCGCACGATGCGCATTTGGATCTCGAACACTG
TCGAAAACCAACCCTGGCAGACTGCCAACGGTGCCGCCCCCGGAAGCAAC
CCCGGCTCCGGACGGTACAAGGTACGCATCGAGGGACGTCTTCTGGACGA
CGACACCGACCCGACCGCCCCGGAGGATAGTGACGACGAAGCTACCGAGC
AGACGGACAACGGCGACGCGATGGAGCAAGATGGACCTAACGCCAATGCC
ACTACCAAAAAGTCGTCCAACAAGCGCACCAAGCAGCGCTTCTCGCACTT
CTTCAAATCCATTACCGTCGACTTCGATAAGTCCTCCACCGCCAGCCCGG
AAGAAGTCAAGCCAATCACCTGGACCAAACCGCAATTACCCCCTAACACT
GTCACTCTGCCGCCCACAGCAGACTTCGACTCGATGCAGTTCACCCGCGC
GTCACAGGAGAACCTGAACGTGACATTCAGTCTCGTGCGCGACGAGACAC
CAGAACGGTTCAAGCTAAGCAAAGAGCTAGCAGAAGTACTAGACGTAGAG
GAAGAAACACGAAGCGGCATTGTTCTCGGAATCTGGGACTACATCCGTGC
CATGGGCCTTCAAGAAGATGAAGAGAAGCGACTCGTCCGCTGTGACCATC
GTCTACGATCGATGAATGCCCAGATCCCACCCAACTACGGCCGTGGGTTC
CCCCCACAAGCCGCCCAACGCTCCCCTGCCACGCCTCGTCGCGGTCCTCC
AGGTCCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011636-T1.utr3p1 | KJC3_011636-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011636-T1.utr5p1 | KJC3_011636-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262IY3 |
| DBxref | InterPro:IPR036885 |
| DBxref | InterPro:IPR003121 |
| DBxref | InterPro:IPR019835 |
| DBxref | PFAM:PF02201 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1196182..1198245 - |
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