|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1236612..1237682- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011655-T1 ID=KJC3_011655-T1|Name=KJC3_011655-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1071bp|location=Sequence derived from alignment at ch8:1236612..1237682- (Aspergillus niger KJC3)
ATGGTCTGGAAATATTTGGACAGCCCCGAGCTGTACCATAGCTCATACCG
GCTCGAATGGGGATCTAAGATAGCCAAGCTATTGGATCATGCCAAAGTCC
CCTACGTAGCCTGGGGAGATTTGATGAATGTGCACATGGTAATGCACATT
GTGACTGTGAGGCAAACCCACCACCTAATAGGTTGAAGAAAAAAAAAAAT
AAATAAAAAAAGAAAATGGAAAGGGCTAACTGATCGACAATAGAATCGTG
CCCTTTGCTTCGTGGTTCCGGATGATCGCCTGGATGCCGCTATACGAGCA
TTGCGAGTTGCTGGTTTTCCTGAGCATCCTTGTCAAGTTTCATTTTGTGA
CTGGGCCAGCCCCTCCAAGAACCGAATGCCAAACCCTTGGCCTGACCACC
ACTTCCACCATTATCAAGAGGTAGAAGACCTTGTCTGGTCCGGAACATAT
ACAGACTGCTACCCTATTGGTCTGTTTCGGAAGTCCCAGTGGCTCTGGCT
CTTGCCCGATCTTCCCCTTGATTTTCCTGAGCCCAATGACCCCAATTTCA
TGCTCTCTACAGACCGCCGTCTCCCTGACTGGGATATGGAGGGGTTCGGA
AACTCCTTTTATCCCATAAAGCTGCTCACCCCGGCACGATGGATAGAGTC
ATTATTCTGCCAGGAGATCAGAGATTCAAGTCTAACTGATGACTTGTCGG
AACCTTGGCACCGACCTGTTAAAGATTTCCATGAACGACTTGCAAGACTA
CTGCATCCGGAATTATTTCATGTTGACCTCATCCAACGACCATTTCGCAC
CTTCTATAAGCTGAAAACGAACTGGCGTCCCTTATCATTCCCCCTGATGG
AATTACTGATGGCCCGGTTGTGGGAAGAATGGCAGAAAGCTGGTTCTATG
CCAGACCCTGTTTCCCCGTTCGATATCGAACGGCACAAGCAGAATGTCGA
GAAGTTCAAACAGGCCTTTCCATATTCAGACAATAAGCTTAGCGAGATTT
TGCGAAACGGTGTTTAGATCCCAGAGTCAGGTTTTCACTCAGTCACCCTC
CCTCTTCTCCCTCCTTTCCAG back to topCoding sequence (CDS) from alignment at ch8:1236612..1237682- >KJC3_011655-T1 ID=KJC3_011655-T1|Name=KJC3_011655-T1|organism=Aspergillus niger KJC3|type=CDS|length=1860bp|location=Sequence derived from alignment at ch8:1236612..1237682- (Aspergillus niger KJC3)
AATCGTGCCCTTTGCTTCGTGGTTCCGGATGATCGCCTGGATGCCGCTAT
ACGAGCATTGCGAGTTGCTGGTTTTCCTGAGCATCCTTGTCAAGTTTCAT
TTTGTGACTGGGCCAGCCCCTCCAAGAACCGAATGCCAAACCCTTGGCCT
GACCACCACTTCCACCATTATCAAGAGGTAGAAGACCTTGTCTGGTCCGG
AACATATACAGACTGCTACCCTATTGGTCTGTTTCGGAAGTCCCAGTGGC
TCTGGCTCTTGCCCGATCTTCCCCTTGATTTTCCTGAGCCCAATGACCCC
AATTTCATGCTCTCTACAGACCGCCGTCTCCCTGACTGGGATATGGAGGG
GTTCGGAAACTCCTTTTATCCCATAAAGCTGCTCACCCCGGCACGATGGA
TAGAGTCATTATTCTGCCAGGAGATCAGAGATTCAAGTCTAACTGATGAC
TTGTCGGAACCTTGGCACCGACCTGTTAAAGATTTCCATGAACGACTTGC
AAGACTACTGCATCCGGAATTATTTCATGTTGACCTCATCCAACGACCAT
TTCGCACCTTCTATAAGCTGAAAACGAACTGGCGTCCCTTATCATTCCCC
CTGATGGAATTACTGATGGCCCGGTTGTGGGAAGAATGGCAGAAAGCTGG
TTCTATGCCAGACCCTGTTTCCCCGTTCGATATCGAACGGCACAAGCAGA
ATGTCGAGAAGTTCAAACAGGCCTTTCCATATTCAGACAATAAGCTTAGC
GAGATTTTGCGAAACGGTGTTTAGATGGTCTGGAAATATTTGGACAGCCC
CGAGCTGTACCATAGCTCATACCGGCTCGAATGGGGATCTAAGATAGCCA
AGCTATTGGATCATGCCAAAGTCCCCTACGTAGCCTGGGGAGATTTGATG
AATGTGCACATGGTAATGCACATTGTGACTAATCGTGCCCTTTGCTTCGT
GGTTCCGGATGATCGCCTGGATGCCGCTATACGAGCATTGCGAGTTGCTG
GTTTTCCTGAGCATCCTTGTCAAGTTTCATTTTGTGACTGGGCCAGCCCC
TCCAAGAACCGAATGCCAAACCCTTGGCCTGACCACCACTTCCACCATTA
TCAAGAGGTAGAAGACCTTGTCTGGTCCGGAACATATACAGACTGCTACC
CTATTGGTCTGTTTCGGAAGTCCCAGTGGCTCTGGCTCTTGCCCGATCTT
CCCCTTGATTTTCCTGAGCCCAATGACCCCAATTTCATGCTCTCTACAGA
CCGCCGTCTCCCTGACTGGGATATGGAGGGGTTCGGAAACTCCTTTTATC
CCATAAAGCTGCTCACCCCGGCACGATGGATAGAGTCATTATTCTGCCAG
GAGATCAGAGATTCAAGTCTAACTGATGACTTGTCGGAACCTTGGCACCG
ACCTGTTAAAGATTTCCATGAACGACTTGCAAGACTACTGCATCCGGAAT
TATTTCATGTTGACCTCATCCAACGACCATTTCGCACCTTCTATAAGCTG
AAAACGAACTGGCGTCCCTTATCATTCCCCCTGATGGAATTACTGATGGC
CCGGTTGTGGGAAGAATGGCAGAAAGCTGGTTCTATGCCAGACCCTGTTT
CCCCGTTCGATATCGAACGGCACAAGCAGAATGTCGAGAAGTTCAAACAG
GCCTTTCCATATTCAGACAATAAGCTTAGCGAGATTTTGCGAAACGGTGT
TTAGATGGTCTGGAAATATTTGGACAGCCCCGAGCTGTACCATAGCTCAT
ACCGGCTCGAATGGGGATCTAAGATAGCCAAGCTATTGGATCATGCCAAA
GTCCCCTACGTAGCCTGGGGAGATTTGATGAATGTGCACATGGTAATGCA
CATTGTGACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011655-T1.utr3p1 | KJC3_011655-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1236612..1237682 - |
|
