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KJC3_011663-T1, KJC3_011663-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011663-T1
Unique NameKJC3_011663-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1261162..1261830+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011663-T1 ID=KJC3_011663-T1|Name=KJC3_011663-T1|organism=Aspergillus niger KJC3|type=mRNA|length=669bp|location=Sequence derived from alignment at ch8:1261162..1261830+ (Aspergillus niger KJC3)
CGATATCATTCGTCAATATAATGGCCTCCTTATGAAGATATCTGACTTGC
TGGAATGAACGCACCTCTTCCTTCTACGCGGGCGTTCCTCTCCGATCTAC
CTTCTCATCCAGTTAGCTCGAAGGTTCGATTTCTCGGTTGGTGCGTGGAG
TTCCTTGTCTGTCTATGTGTGTATCTTACTATTTTACATGCTGCATACCG
TAGACTATCTAGAAAGGCTTGCCTCTTCACTTGTTCGGGAATATAGTGGT
AAAGAGACTGATTTTCTCAGTGTGAGGACATACAACATCCAAACGGGGCA
CCTCATCCTCGAACACAACTATCCGCGTCAGAAACCACCGCTGGAACCAC
CCTCTGTTGCAGTTGATATCAACGCGGTGCTGGAGACAGTCACGTCAGAA
GAGCTGTCCGTTGGCGCATGGGTGAACGTGCTTGGATATGTAAGGAGGAA
CAGGAGGAGTGATGATGATGATTCTGCCCTCTCACAATCAAATCCAAATC
CAGTGTATGTGGAAGCCGTGATGCTTTTCCCAGCAGGCGCCGTGGCGTTG
GGAGAGTATGAGCGAATCCTGCAGGAAGCGTTGGGCGTGGAGAGGAGGAT
GCGGAGGACAGGCTGATAAAATATATTATTGATTAATGACTAGCAATTAT
TCAACTTCTTTTTATGTGC
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Coding sequence (CDS) from alignment at ch8:1261162..1261830+

>KJC3_011663-T1 ID=KJC3_011663-T1|Name=KJC3_011663-T1|organism=Aspergillus niger KJC3|type=CDS|length=429bp|location=Sequence derived from alignment at ch8:1261162..1261830+ (Aspergillus niger KJC3)
ATGCTGCATACCGTAGACTATCTAGAAAGGCTTGCCTCTTCACTTGTTCG
GGAATATAGTGGTAAAGAGACTGATTTTCTCAGTGTGAGGACATACAACA
TCCAAACGGGGCACCTCATCCTCGAACACAACTATCCGCGTCAGAAACCA
CCGCTGGAACCACCCTCTGTTGCAGTTGATATCAACGCGGTGCTGGAGAC
AGTCACGTCAGAAGAGCTGTCCGTTGGCGCATGGGTGAACGTGCTTGGAT
ATGTAAGGAGGAACAGGAGGAGTGATGATGATGATTCTGCCCTCTCACAA
TCAAATCCAAATCCAGTGTATGTGGAAGCCGTGATGCTTTTCCCAGCAGG
CGCCGTGGCGTTGGGAGAGTATGAGCGAATCCTGCAGGAAGCGTTGGGCG
TGGAGAGGAGGATGCGGAGGACAGGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:1990879CST complex
Vocabulary: Biological Process
TermDefinition
GO:0016233telomere capping
Vocabulary: Molecular Function
TermDefinition
GO:0043047single-stranded telomeric DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011663KJC3_011663Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011663-T1.utr5p1KJC3_011663-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011663-T1.exon1KJC3_011663-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011663-T1.cdsKJC3_011663-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011663-T1.utr3p1KJC3_011663-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011663-T1KJC3_011663-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR024222
DBxrefPFAM:PF12658
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1261162..1261830 +
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