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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1262960..1265607- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011664-T1 ID=KJC3_011664-T1|Name=KJC3_011664-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2648bp|location=Sequence derived from alignment at ch8:1262960..1265607- (Aspergillus niger KJC3)
GTTCTCGTCCGACGCCCCCACTTGGAGTGTCTTTCCTCTGCCTCGTTCTC
GCTCTCTCGCTCTCTCTTTTCCCCCAAAATGTCACTGACTCATTAGTTTT
AGTTGCTCATAATTATCGCGTGCGTTTCAGATTTTGATTTCCGCTAAGCT
TTATCTTGCAACTCCCAACGTCAATCACTCCCAAAAAATTGCCATCTTCC
ATTCCCAGCATTTGTGCTCATTTCGTTGCTTTCCATGTCTGCTGCGCTAC
ATTCTGAATTCGCGCAGTGTTGATTATCTTGGGAGCAATTCTCTGCTTGG
TATCCTGTCGCATTGATTACTAGTTCATATACCTTCTCTTACTGGGTTCG
AGAGCACGAGCGCAAGGTCCAAGGGCCAGTTTGTCGATTTATTATATAGA
AGCTGCAGCGCATTCCAGCGCGCTCTATCTTATTTCTTCCCTCACATTGC
TCCTCCACTACAGCCATATAATAAGATTAGGAGGTCTATATCGGCTGAAA
CGACTGTACTCGGTCCAGCTGTGGAGAGCTCTTCCACCTCTGGGTCACGG
ACCGACTTCTAATAGACGCCACGAAAAGCATGTCCTCCCCAAAGAATTCT
TCATCAGATCCCCCGGCAGGCCCGAGGGATAGCAAAGAGGGGCCTACCTC
TACATATGCGCAATCCTACGCAGTATCAGGCTCGTCCGAGGACACAGTTG
ATCAAGTGGATGGCCTGGCGCATATCCCTACGCGCGCCTCTCGGGCCTCG
GTACCCTCTCTAGCCCAGAGAGTCACATCTATAGGGACGACTGGTACCTC
TGACCCGAACTATGAAGTCGACTGGGACGATGAGTTCGACACAAATAATC
CGAAGAACTGGTCGTTCCCCTACAAAGCTATGGGAATCGCCATCCTATCA
TACAACACTTTGATTATGTGAGTCTGGCGCATCGCCTAGATACGCATCAT
GCGATAACGACGCTAATCCCTTCCAGCGTATTATATTCAACATCGTACAC
CTCGGGAGAGTCGCAGATTGCAGCTGAATTCGGGACTTCCACCACCATCG
TTACGTTGGGATTGACTTTGTACCTCATCGGTCTGGCTGTGGGATCCATG
TTTATGGCGCCATTGAGCGAATTGTACGGCCGGAAGCCGGTCTGCATAGC
CTGCTTGTTCATCTTCACGGTTTTGATCATACCTTGCGCGCTCGCCAAAA
ATCTTGCTACCCTGCTGGTTGTGCGCTTCATCGCAGCTTTGTTCGGAAGT
GTAATGATCTCCACTGCGCCGGGAATGGTTGCGGACATAGTGGAAGATGA
CCAGCGCGCGCTGGCAATGTCGGTCTGGAGTCTTGGGCCCGTGAATGGCC
CAGGTAAGCATAGCCATCTCCCAGTCACAACCTACCTGTAACTAACTATG
CCCTAGTTCTCGGGCCTATTATCGGCGGCTTCGTCACCCAGTACCTGGGC
TGGCGGTGGATGGATTGGATCGCTCTAATATTGTCTGGGGTCGCGTTGGT
CCTTTCATGTATCATGAAGGAGACCTATGGCCCCATCATCCTGCAAAAGA
AAGCCGCCCGCATGCGGAAAGAAACGGGCGATTCACGATGGTGGTGTCGA
TACGAACAGAAGGCTAGCCTGAGTGAACTACTCAAGATAAACCTCGGCCG
CCCGTTTGTCATGGCAGTCACTGAACCTATTTGGTTAGTCTTTCCGAACC
CGTACTCATGCTGTCACCCCAAAGCTAATGCACTTGTTCATATAGTATAT
TTTGGAATATCTACATTGCCATCGTGTATGGCATCCTCTACCTGTGCTTC
ACAGCATACCCTATCGTTTTCCGGGATATTCGGGGTTGGTCACTTGGTCT
CTCCGGTCTCGCATTCTTGGGTATCGGAACTGGATGTGTGATCACCATCT
CCAGCGAACCTCTGATCCGCCGTCTGATCAACAGCCATAAACCGGACCCC
GAAACGGGAAAGCCACCCCCGGAGGCAATGGTGGCTTTCGTATGTATCTG
CGCGCTCCTGATTCCAGCTGGAGAATTGTGGTTCGCCTGGACCTGTTCGC
CCGCCTCGATACCCTGGATTGTACCGATTCTCGCAGGTGTACTCTTCGGT
ACAGGCAACACGGGCGTCTTTATCTACGCGACCAACTACCTGGCTGGTAG
TTACGGGGTGTATGCAGCGTCAGCGCTGGCAGGGAATTCGGTGATCCGCA
GTATCCTAGGTGGTGTCTTACCCCTTGTTGGAACGTATATGTATGCCGGT
ATTGGTCCCAATTGGTCTGGGACGCTGTTAGGCTTGCTCGAGGTGGCTAT
CGTTCCGATCCCATTCATTTTCTACAAGTATGGGTACAAAATCCGGGAGA
AGAGCGTGCTCATCCGGCGGATGCAGGAGGATAAGCAGCGATTGGCGGGA
AAGCGCCAACGCCAAACACAGCAGGTGCCAAATCTCGAGAAGACGGAGGA
GGAGACGATGGAGGTGTAATAAGGTGTGTGATTGAACCTGGTAACAGTGA
ATAATCGACAATAAGTGCAGGAATACATGAGTCCTTGCACAGAAAAGCAT
CCTTGCACAGTAGGAGTTTGGATTGGAAGCCTGACTTTCACTCGAAGGAA
ATATTTGTCCGGGTAAACTGGGTATATATCTAGCAATTTCAATGGTCT back to topCoding sequence (CDS) from alignment at ch8:1262960..1265607- >KJC3_011664-T1 ID=KJC3_011664-T1|Name=KJC3_011664-T1|organism=Aspergillus niger KJC3|type=CDS|length=6864bp|location=Sequence derived from alignment at ch8:1262960..1265607- (Aspergillus niger KJC3)
TATATTTTGGAATATCTACATTGCCATCGTGTATGGCATCCTCTACCTGT
GCTTCACAGCATACCCTATCGTTTTCCGGGATATTCGGGGTTGGTCACTT
GGTCTCTCCGGTCTCGCATTCTTGGGTATCGGAACTGGATGTGTGATCAC
CATCTCCAGCGAACCTCTGATCCGCCGTCTGATCAACAGCCATAAACCGG
ACCCCGAAACGGGAAAGCCACCCCCGGAGGCAATGGTGGCTTTCGTATGT
ATCTGCGCGCTCCTGATTCCAGCTGGAGAATTGTGGTTCGCCTGGACCTG
TTCGCCCGCCTCGATACCCTGGATTGTACCGATTCTCGCAGGTGTACTCT
TCGGTACAGGCAACACGGGCGTCTTTATCTACGCGACCAACTACCTGGCT
GGTAGTTACGGGGTGTATGCAGCGTCAGCGCTGGCAGGGAATTCGGTGAT
CCGCAGTATCCTAGGTGGTGTCTTACCCCTTGTTGGAACGTATATGTATG
CCGGTATTGGTCCCAATTGGTCTGGGACGCTGTTAGGCTTGCTCGAGGTG
GCTATCGTTCCGATCCCATTCATTTTCTACAAGTATGGGTACAAAATCCG
GGAGAAGAGCGTGCTCATCCGGCGGATGCAGGAGGATAAGCAGCGATTGG
CGGGAAAGCGCCAACGCCAAACACAGCAGGTGCCAAATCTCGAGAAGACG
GAGGAGGAGACGATGGAGGTGTAATTCTCGGGCCTATTATCGGCGGCTTC
GTCACCCAGTACCTGGGCTGGCGGTGGATGGATTGGATCGCTCTAATATT
GTCTGGGGTCGCGTTGGTCCTTTCATGTATCATGAAGGAGACCTATGGCC
CCATCATCCTGCAAAAGAAAGCCGCCCGCATGCGGAAAGAAACGGGCGAT
TCACGATGGTGGTGTCGATACGAACAGAAGGCTAGCCTGAGTGAACTACT
CAAGATAAACCTCGGCCGCCCGTTTGTCATGGCAGTCACTGAACCTATTT
GCGTATTATATTCAACATCGTACACCTCGGGAGAGTCGCAGATTGCAGCT
GAATTCGGGACTTCCACCACCATCGTTACGTTGGGATTGACTTTGTACCT
CATCGGTCTGGCTGTGGGATCCATGTTTATGGCGCCATTGAGCGAATTGT
ACGGCCGGAAGCCGGTCTGCATAGCCTGCTTGTTCATCTTCACGGTTTTG
ATCATACCTTGCGCGCTCGCCAAAAATCTTGCTACCCTGCTGGTTGTGCG
CTTCATCGCAGCTTTGTTCGGAAGTGTAATGATCTCCACTGCGCCGGGAA
TGGTTGCGGACATAGTGGAAGATGACCAGCGCGCGCTGGCAATGTCGGTC
TGGAGTCTTGGGCCCGTGAATGGCCCAGATGTCCTCCCCAAAGAATTCTT
CATCAGATCCCCCGGCAGGCCCGAGGGATAGCAAAGAGGGGCCTACCTCT
ACATATGCGCAATCCTACGCAGTATCAGGCTCGTCCGAGGACACAGTTGA
TCAAGTGGATGGCCTGGCGCATATCCCTACGCGCGCCTCTCGGGCCTCGG
TACCCTCTCTAGCCCAGAGAGTCACATCTATAGGGACGACTGGTACCTCT
GACCCGAACTATGAAGTCGACTGGGACGATGAGTTCGACACAAATAATCC
GAAGAACTGGTCGTTCCCCTACAAAGCTATGGGAATCGCCATCCTATCAT
ACAACACTTTGATTATTATATTTTGGAATATCTACATTGCCATCGTGTAT
GGCATCCTCTACCTGTGCTTCACAGCATACCCTATCGTTTTCCGGGATAT
TCGGGGTTGGTCACTTGGTCTCTCCGGTCTCGCATTCTTGGGTATCGGAA
CTGGATGTGTGATCACCATCTCCAGCGAACCTCTGATCCGCCGTCTGATC
AACAGCCATAAACCGGACCCCGAAACGGGAAAGCCACCCCCGGAGGCAAT
GGTGGCTTTCGTATGTATCTGCGCGCTCCTGATTCCAGCTGGAGAATTGT
GGTTCGCCTGGACCTGTTCGCCCGCCTCGATACCCTGGATTGTACCGATT
CTCGCAGGTGTACTCTTCGGTACAGGCAACACGGGCGTCTTTATCTACGC
GACCAACTACCTGGCTGGTAGTTACGGGGTGTATGCAGCGTCAGCGCTGG
CAGGGAATTCGGTGATCCGCAGTATCCTAGGTGGTGTCTTACCCCTTGTT
GGAACGTATATGTATGCCGGTATTGGTCCCAATTGGTCTGGGACGCTGTT
AGGCTTGCTCGAGGTGGCTATCGTTCCGATCCCATTCATTTTCTACAAGT
ATGGGTACAAAATCCGGGAGAAGAGCGTGCTCATCCGGCGGATGCAGGAG
GATAAGCAGCGATTGGCGGGAAAGCGCCAACGCCAAACACAGCAGGTGCC
AAATCTCGAGAAGACGGAGGAGGAGACGATGGAGGTGTAATTCTCGGGCC
TATTATCGGCGGCTTCGTCACCCAGTACCTGGGCTGGCGGTGGATGGATT
GGATCGCTCTAATATTGTCTGGGGTCGCGTTGGTCCTTTCATGTATCATG
AAGGAGACCTATGGCCCCATCATCCTGCAAAAGAAAGCCGCCCGCATGCG
GAAAGAAACGGGCGATTCACGATGGTGGTGTCGATACGAACAGAAGGCTA
GCCTGAGTGAACTACTCAAGATAAACCTCGGCCGCCCGTTTGTCATGGCA
GTCACTGAACCTATTTGCGTATTATATTCAACATCGTACACCTCGGGAGA
GTCGCAGATTGCAGCTGAATTCGGGACTTCCACCACCATCGTTACGTTGG
GATTGACTTTGTACCTCATCGGTCTGGCTGTGGGATCCATGTTTATGGCG
CCATTGAGCGAATTGTACGGCCGGAAGCCGGTCTGCATAGCCTGCTTGTT
CATCTTCACGGTTTTGATCATACCTTGCGCGCTCGCCAAAAATCTTGCTA
CCCTGCTGGTTGTGCGCTTCATCGCAGCTTTGTTCGGAAGTGTAATGATC
TCCACTGCGCCGGGAATGGTTGCGGACATAGTGGAAGATGACCAGCGCGC
GCTGGCAATGTCGGTCTGGAGTCTTGGGCCCGTGAATGGCCCAGATGTCC
TCCCCAAAGAATTCTTCATCAGATCCCCCGGCAGGCCCGAGGGATAGCAA
AGAGGGGCCTACCTCTACATATGCGCAATCCTACGCAGTATCAGGCTCGT
CCGAGGACACAGTTGATCAAGTGGATGGCCTGGCGCATATCCCTACGCGC
GCCTCTCGGGCCTCGGTACCCTCTCTAGCCCAGAGAGTCACATCTATAGG
GACGACTGGTACCTCTGACCCGAACTATGAAGTCGACTGGGACGATGAGT
TCGACACAAATAATCCGAAGAACTGGTCGTTCCCCTACAAAGCTATGGGA
ATCGCCATCCTATCATACAACACTTTGATTATTATATTTTGGAATATCTA
CATTGCCATCGTGTATGGCATCCTCTACCTGTGCTTCACAGCATACCCTA
TCGTTTTCCGGGATATTCGGGGTTGGTCACTTGGTCTCTCCGGTCTCGCA
TTCTTGGGTATCGGAACTGGATGTGTGATCACCATCTCCAGCGAACCTCT
GATCCGCCGTCTGATCAACAGCCATAAACCGGACCCCGAAACGGGAAAGC
CACCCCCGGAGGCAATGGTGGCTTTCGTATGTATCTGCGCGCTCCTGATT
CCAGCTGGAGAATTGTGGTTCGCCTGGACCTGTTCGCCCGCCTCGATACC
CTGGATTGTACCGATTCTCGCAGGTGTACTCTTCGGTACAGGCAACACGG
GCGTCTTTATCTACGCGACCAACTACCTGGCTGGTAGTTACGGGGTGTAT
GCAGCGTCAGCGCTGGCAGGGAATTCGGTGATCCGCAGTATCCTAGGTGG
TGTCTTACCCCTTGTTGGAACGTATATGTATGCCGGTATTGGTCCCAATT
GGTCTGGGACGCTGTTAGGCTTGCTCGAGGTGGCTATCGTTCCGATCCCA
TTCATTTTCTACAAGTATGGGTACAAAATCCGGGAGAAGAGCGTGCTCAT
CCGGCGGATGCAGGAGGATAAGCAGCGATTGGCGGGAAAGCGCCAACGCC
AAACACAGCAGGTGCCAAATCTCGAGAAGACGGAGGAGGAGACGATGGAG
GTGTAATTCTCGGGCCTATTATCGGCGGCTTCGTCACCCAGTACCTGGGC
TGGCGGTGGATGGATTGGATCGCTCTAATATTGTCTGGGGTCGCGTTGGT
CCTTTCATGTATCATGAAGGAGACCTATGGCCCCATCATCCTGCAAAAGA
AAGCCGCCCGCATGCGGAAAGAAACGGGCGATTCACGATGGTGGTGTCGA
TACGAACAGAAGGCTAGCCTGAGTGAACTACTCAAGATAAACCTCGGCCG
CCCGTTTGTCATGGCAGTCACTGAACCTATTTGCGTATTATATTCAACAT
CGTACACCTCGGGAGAGTCGCAGATTGCAGCTGAATTCGGGACTTCCACC
ACCATCGTTACGTTGGGATTGACTTTGTACCTCATCGGTCTGGCTGTGGG
ATCCATGTTTATGGCGCCATTGAGCGAATTGTACGGCCGGAAGCCGGTCT
GCATAGCCTGCTTGTTCATCTTCACGGTTTTGATCATACCTTGCGCGCTC
GCCAAAAATCTTGCTACCCTGCTGGTTGTGCGCTTCATCGCAGCTTTGTT
CGGAAGTGTAATGATCTCCACTGCGCCGGGAATGGTTGCGGACATAGTGG
AAGATGACCAGCGCGCGCTGGCAATGTCGGTCTGGAGTCTTGGGCCCGTG
AATGGCCCAGATGTCCTCCCCAAAGAATTCTTCATCAGATCCCCCGGCAG
GCCCGAGGGATAGCAAAGAGGGGCCTACCTCTACATATGCGCAATCCTAC
GCAGTATCAGGCTCGTCCGAGGACACAGTTGATCAAGTGGATGGCCTGGC
GCATATCCCTACGCGCGCCTCTCGGGCCTCGGTACCCTCTCTAGCCCAGA
GAGTCACATCTATAGGGACGACTGGTACCTCTGACCCGAACTATGAAGTC
GACTGGGACGATGAGTTCGACACAAATAATCCGAAGAACTGGTCGTTCCC
CTACAAAGCTATGGGAATCGCCATCCTATCATACAACACTTTGATTATTA
TATTTTGGAATATCTACATTGCCATCGTGTATGGCATCCTCTACCTGTGC
TTCACAGCATACCCTATCGTTTTCCGGGATATTCGGGGTTGGTCACTTGG
TCTCTCCGGTCTCGCATTCTTGGGTATCGGAACTGGATGTGTGATCACCA
TCTCCAGCGAACCTCTGATCCGCCGTCTGATCAACAGCCATAAACCGGAC
CCCGAAACGGGAAAGCCACCCCCGGAGGCAATGGTGGCTTTCGTATGTAT
CTGCGCGCTCCTGATTCCAGCTGGAGAATTGTGGTTCGCCTGGACCTGTT
CGCCCGCCTCGATACCCTGGATTGTACCGATTCTCGCAGGTGTACTCTTC
GGTACAGGCAACACGGGCGTCTTTATCTACGCGACCAACTACCTGGCTGG
TAGTTACGGGGTGTATGCAGCGTCAGCGCTGGCAGGGAATTCGGTGATCC
GCAGTATCCTAGGTGGTGTCTTACCCCTTGTTGGAACGTATATGTATGCC
GGTATTGGTCCCAATTGGTCTGGGACGCTGTTAGGCTTGCTCGAGGTGGC
TATCGTTCCGATCCCATTCATTTTCTACAAGTATGGGTACAAAATCCGGG
AGAAGAGCGTGCTCATCCGGCGGATGCAGGAGGATAAGCAGCGATTGGCG
GGAAAGCGCCAACGCCAAACACAGCAGGTGCCAAATCTCGAGAAGACGGA
GGAGGAGACGATGGAGGTGTAATTCTCGGGCCTATTATCGGCGGCTTCGT
CACCCAGTACCTGGGCTGGCGGTGGATGGATTGGATCGCTCTAATATTGT
CTGGGGTCGCGTTGGTCCTTTCATGTATCATGAAGGAGACCTATGGCCCC
ATCATCCTGCAAAAGAAAGCCGCCCGCATGCGGAAAGAAACGGGCGATTC
ACGATGGTGGTGTCGATACGAACAGAAGGCTAGCCTGAGTGAACTACTCA
AGATAAACCTCGGCCGCCCGTTTGTCATGGCAGTCACTGAACCTATTTGC
GTATTATATTCAACATCGTACACCTCGGGAGAGTCGCAGATTGCAGCTGA
ATTCGGGACTTCCACCACCATCGTTACGTTGGGATTGACTTTGTACCTCA
TCGGTCTGGCTGTGGGATCCATGTTTATGGCGCCATTGAGCGAATTGTAC
GGCCGGAAGCCGGTCTGCATAGCCTGCTTGTTCATCTTCACGGTTTTGAT
CATACCTTGCGCGCTCGCCAAAAATCTTGCTACCCTGCTGGTTGTGCGCT
TCATCGCAGCTTTGTTCGGAAGTGTAATGATCTCCACTGCGCCGGGAATG
GTTGCGGACATAGTGGAAGATGACCAGCGCGCGCTGGCAATGTCGGTCTG
GAGTCTTGGGCCCGTGAATGGCCCAGATGTCCTCCCCAAAGAATTCTTCA
TCAGATCCCCCGGCAGGCCCGAGGGATAGCAAAGAGGGGCCTACCTCTAC
ATATGCGCAATCCTACGCAGTATCAGGCTCGTCCGAGGACACAGTTGATC
AAGTGGATGGCCTGGCGCATATCCCTACGCGCGCCTCTCGGGCCTCGGTA
CCCTCTCTAGCCCAGAGAGTCACATCTATAGGGACGACTGGTACCTCTGA
CCCGAACTATGAAGTCGACTGGGACGATGAGTTCGACACAAATAATCCGA
AGAACTGGTCGTTCCCCTACAAAGCTATGGGAATCGCCATCCTATCATAC
AACACTTTGATTAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011664-T1.utr3p1 | KJC3_011664-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011664-T1.utr5p1 | KJC3_011664-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1262960..1265607 - |
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