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KJC3_011680-T1, KJC3_011680-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011680-T1
Unique NameKJC3_011680-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1303530..1304785-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011680-T1 ID=KJC3_011680-T1|Name=KJC3_011680-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1256bp|location=Sequence derived from alignment at ch8:1303530..1304785- (Aspergillus niger KJC3)
ATGATTGTTCGGCAACTTGTGCGGCAAAGTGAGTTACTCCATGGATTGGG
TTTATTGATAGGAAATATTGATGCTGATTCCCCCGTCCCCATCTAGGCCG
CCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTCTCTT
CCACGGAGACGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGAGCAA
GCACCTCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGCCTGG
TACGTCTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCGCCGTAAGT
ACCGCAATATTCTAGCTGTTACGCCTGTCGCTGCCCGAAGGGAAAGCTAA
TATACATCCTCTGGTTCAGGAGTCAAATTCCACAGTCTCGGTAGCGATGT
GACCGGCGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCA
CCGACGTTACCCTCGAAATGCTCCTCGCCAACCAGACACACCTTGGACAC
TCGACTTCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCGGTATCAG
GGAGGGAACTCACATCATCTCCCTTGATGTGACGGCGGCTTACCTCCGCC
GTGCGGCCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATTGATTCTC
TTTGCGGGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGA
ATTGGCTCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGTAGCTTGA
CCAATGGCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGTGAACGGC
TTGGATGAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAATCTTACCG
TGCACTTAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAGAACGTTG
TCCTGTTGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGGTATCATC
GACACCGACGCCGACCCTACCCGTGTCACATACCCGATCCCTGCGAACGA
CGACAGTTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGACGGGCAG
GAGAAGTGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGGTCACTTG
ACGTATGAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGCAGACTCT
AGAGACCGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCT
CTGAGGGAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAAGGATGAC
GAATAG
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Coding sequence (CDS) from alignment at ch8:1303530..1304785-

>KJC3_011680-T1 ID=KJC3_011680-T1|Name=KJC3_011680-T1|organism=Aspergillus niger KJC3|type=CDS|length=3339bp|location=Sequence derived from alignment at ch8:1303530..1304785- (Aspergillus niger KJC3)
GAGTCAAATTCCACAGTCTCGGTAGCGATGTGACCGGCGTCTACCGGCCA
GAGAGCCTCCTCAAAAACCCTCCTCAAGCCACCGACGTTACCCTCGAAAT
GCTCCTCGCCAACCAGACACACCTTGGACACTCGACTTCCCGCTGGAACC
CCCAGAACTCGCGCTATATCTTCGGTATCAGGGAGGGAACTCACATCATC
TCCCTTGATGTGACGGCGGCTTACCTCCGCCGTGCGGCCAAGGTCGTGGA
GGAGGTTGCCTACCGGGGTGGATTGATTCTCTTTGCGGGCACGCGAAAGG
GACAGAAGCGTGCCGTGGTCAGAGCTGCGGAATTGGCTCAGGGATATCAC
ATTTTCGAGCGTTGGATCCCTGGTAGCTTGACCAATGGCCAGCAGATCTT
GGGCCATTGCGAAAAGAAGATTGTGAACGGCTTGGATGAGACGTTGGATG
ATCTCTGGAAAGAGGAATTGGAATCTTACCGTGCACTTAAGCCCGACCTT
GTTGTTTGCTTGAACCCCGTCGAGAACGTTGTCCTGTTGCACGAGTGTGG
TCTCAACAACGTCCCGACTATCGGTATCATCGACACCGACGCCGACCCTA
CCCGTGTCACATACCCGATCCCTGCGAACGACGACAGTTTGCGTTCCGTG
ACTCTGATTGCTGGTGTGCTGGGACGGGCAGGAGAAGTGGGTCAGCGGAG
AAGATTGGCGAGAGCGCGCAAGGGTCACTTGACGTATGAACATATGGAGC
CACTCCGTGTCCAAGTAGAGGAGCAGACTCTAGAGACCGCGGAAGGACAG
AAGTCAGAAGCCTCCTCCCAGGAAGTTGTCTCTGAGGGAAGCCCGCTCGA
GAAGCCTAAGGAAGAGGCTTCCAAGGATGACGAATAGGCCGCCAGCTTCG
GGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTCTCTTCCACGGAGA
CGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGAGCAAGCACCTCAA
TTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGCCTGGTACGTCTGG
TGCACAAGAGAGATTGGATCCGAACACGCTCCGCCATGATTGTTCGGCAA
CTTGTGCGGCAAAGAGTCAAATTCCACAGTCTCGGTAGCGATGTGACCGG
CGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCACCGACG
TTACCCTCGAAATGCTCCTCGCCAACCAGACACACCTTGGACACTCGACT
TCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCGGTATCAGGGAGGG
AACTCACATCATCTCCCTTGATGTGACGGCGGCTTACCTCCGCCGTGCGG
CCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATTGATTCTCTTTGCG
GGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGAATTGGC
TCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGTAGCTTGACCAATG
GCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGTGAACGGCTTGGAT
GAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAATCTTACCGTGCACT
TAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAGAACGTTGTCCTGT
TGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGGTATCATCGACACC
GACGCCGACCCTACCCGTGTCACATACCCGATCCCTGCGAACGACGACAG
TTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGACGGGCAGGAGAAG
TGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGGTCACTTGACGTAT
GAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGCAGACTCTAGAGAC
CGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCTCTGAGG
GAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAAGGATGACGAATAG
GCCGCCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTC
TCTTCCACGGAGACGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGA
GCAAGCACCTCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGC
CTGGTACGTCTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCGCCAT
GATTGTTCGGCAACTTGTGCGGCAAAGAGTCAAATTCCACAGTCTCGGTA
GCGATGTGACCGGCGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCT
CAAGCCACCGACGTTACCCTCGAAATGCTCCTCGCCAACCAGACACACCT
TGGACACTCGACTTCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCG
GTATCAGGGAGGGAACTCACATCATCTCCCTTGATGTGACGGCGGCTTAC
CTCCGCCGTGCGGCCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATT
GATTCTCTTTGCGGGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAG
CTGCGGAATTGGCTCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGT
AGCTTGACCAATGGCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGT
GAACGGCTTGGATGAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAAT
CTTACCGTGCACTTAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAG
AACGTTGTCCTGTTGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGG
TATCATCGACACCGACGCCGACCCTACCCGTGTCACATACCCGATCCCTG
CGAACGACGACAGTTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGA
CGGGCAGGAGAAGTGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGG
TCACTTGACGTATGAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGC
AGACTCTAGAGACCGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAA
GTTGTCTCTGAGGGAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAA
GGATGACGAATAGGCCGCCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCAT
CTTGTCCCGATTCTCTTCCACGGAGACGACTGGCCAGACCCCAGTACAGA
CTATCGTTGCGGAGCAAGCACCTCAATTAGAGACGCCCGCACCGACTGTT
GCAGTGCGGGAGCCTGGTACGTCTGGTGCACAAGAGAGATTGGATCCGAA
CACGCTCCGCCATGATTGTTCGGCAACTTGTGCGGCAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011680KJC3_011680Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011680-T1KJC3_011680-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011680-T1.cdsKJC3_011680-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011680-T1.exon3KJC3_011680-T1.exon3Aspergillus niger KJC3exon
KJC3_011680-T1.exon2KJC3_011680-T1.exon2Aspergillus niger KJC3exon
KJC3_011680-T1.exon1KJC3_011680-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09263J7D
DBxrefInterPro:IPR023591
DBxrefInterPro:IPR005706
DBxrefInterPro:IPR001865
DBxrefPFAM:PF00318
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1303530..1304785 -
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