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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1310744..1313142+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011683-T1 ID=KJC3_011683-T1|Name=KJC3_011683-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2399bp|location=Sequence derived from alignment at ch8:1310744..1313142+ (Aspergillus niger KJC3)
CCGAAGACAGTCTTGTGTGCGCGGGCGGTGAACAGCCGAGCGGAGACAGA
GCGCCAAGATTTCAACCTGCCCACCCAATTTTTTCGAGGTATCGCGGCCT
TCACTACGTTCGACCGAGCGTTGCCCAAATATCTCATCAACCTCCAGTAT
ATTACTGGCTCAACGGCTTGGATCCCTCGGAAGGTCTGCGGTCACTCAGT
TTCTTGAAGGATGGATGATATCGAGGTGTGTTGTTCCGTGCATTGTACTA
TGCCCGATCACGAGGTTGACCTCCTCTATTTTTTCTTCTTCAGGAACGCC
TCCGAAGCCATGCTCAGGCCTTCGATGGTTTGCTGTCGCTGATCCCGGCG
AAATTTTATTACGGCGAAGATGGCAGTGTATGTGACTTGTCCAATCCTTC
TTGCTGCAAAATTTCCTCCTGCCCTTCTCTTTCTCTCCCTTCGTCTCATT
TGGCGTCGCGCTTAAGACATAGCTGACCCGCGGTTCCTGAAACAGGATCA
ATGGCAGCGCAAGAAGCAGACTAAGGAACAGGCCCGTGAAGCTAAGCGGG
CCAAGTTGGACCCCGATTCCGCCAAGTCAGCAAAGGATGTGATGGACGAG
AACGCACGCAAGCGTAAACGTGACGAGGAAGGGAATGGGGAAGGTGACGA
TTCTTCTGATAACGGTGAACTCGGATCCGAGAAGCCCAAGGAAGGATTGA
AGAGAGGAGATGTCAACTCAAAGAAGCAAAAGCAGGCCGAAGACTCGGCC
AATGCGGAGCGCTCATCCGCCAAGTCGGCTGAAGAGGCAGAAGCGCGCAA
GAAGTTGAAGGAGGAAAAGAAGGCCCAGAAGAAAGCCGCTCAGAAGGAGA
AGAAGAAGGCCAAGGAAGCCGCTAGGAAGGTCAAGGTAGCCGAGCAGTCA
GAAGAGACCGAAACACCTGCTGTGCAAAAATCCGAGTCGACCCCCGCCAA
CAAGACCAAGGAACAAAAACAAAAACAAGAGGACAGCGATAGTGATGACA
ACGAAAGTGTGGACGGCGTCCCCGCCGAAGAACTCTCGCTCGATTTCAGC
GCTGAACAAGAAGAACAACCATCGTCTTCTGCGTCCACCCCGAACTCCCC
TGGGTTCGATGCTTCCAATCCCCAATCGGGCAGCTCTTCCATATCCTCCA
TTGTTCCCCCCACCGAAGCCTCCAAATCCTCCACCTCCGAACCCAAGCCT
CTCAAGCCTACCCCCGATGAGCTAAAGCAACGGTTACAGAAGCGGCTCGA
TGAACTTCGCGCAGCCCGCCATGCCGACGGGCTTAACGGAAAGCCCGCCA
GGAACCGTCAAGAACTAATTGAGGCTCGACGCCAAAAAGCCGAGCAACGC
AAAGCGCACAAGAAGGAGCTGCGCCAGAAGGCTAGAGAAGAAGAGCAACG
GCTGAAGGATGAAGCCATGGCCCGACGCTTCTCTCCTGGCGGCTCGGGAT
CCCTTCTCGCATCCCCGCGCTCCCCTGCTGACTCTGTCGGCTCGAACAAC
AACTTCGCTTTTGGCCGCGTTGTCTTCGCAGATGGCCAACTTGCTGACCC
CAGTCTTTCCGGAGTCCGGGAGCAACCTAAGAGCCACGGTCCCAAAGACC
CCGCCGCAGCCCTGAAGGCTGTTGAAGCGAAGAAGGCCAAGCTTGCCGCC
ATGGACGAGGAGAAGCGGGCCGATATTGAGGAGAAGGACCTGTGGCTTAA
CGCGAAGAAGCGGGCACATGGCGAACGCGTCCGTGACGACACATCATTGC
TGAAGAAGGCGCTCAAGCGCAAGGAGTCGGCGAAGAAGAAGTCTGAGCGC
GAATGGAAGGAGCGTCTGGAAGCCGTGAAGAAGGGCAAGGACATGAGACA
GCAGAAGCGTGAAGAGAACCTCCGGAAGCGCCGAGAGGATAAGGGCAACA
AGGGTGGCGGCAAGAAGCATGCCGGAGGTAAGAAGAAGTCCAGACCGGGC
TTTGAGGGCAGCTTCAAGGCCAAGTCTGGAGGCAAGAAATAAGCAAAACA
TTGTACTGCGTTGGGGAGAAGTGGAGACCCGTCCAAAGTGTAATACCAAG
CTGCAGCCTCTGACCATGTGTACATACACGCACAGAAAAATGGGCCGAGA
TCAGAAAAGAAGAAAAGGAAGAACAAAAGGGAAACTCAGAGAGGAGCAGG
CATGCTACAGATTGAGCAAGAATAGCTCGAGACCAAAAAGTTGAGGGAGT
GCGGGCATTGGAGAAACGGTGTTTGGGGAGTTTAAACTCTGGAGGTTCTC
TGTTCATTTTGTGCATATATACCGAATCTCACGAAGCATTTTTTGTCTTT
GTTTGTGTTTCTATGCCAGCTGAGCTTGCACACACTACTACATTCATGTA
CGAATTGTTTGAGTAATTGAACTTGATGCAGAACGGTAGTGACCCAACA back to topCoding sequence (CDS) from alignment at ch8:1310744..1313142+ >KJC3_011683-T1 ID=KJC3_011683-T1|Name=KJC3_011683-T1|organism=Aspergillus niger KJC3|type=CDS|length=1401bp|location=Sequence derived from alignment at ch8:1310744..1313142+ (Aspergillus niger KJC3)
ATGGACGAGAACGCACGCAAGCGTAAACGTGACGAGGAAGGGAATGGGGA
AGGTGACGATTCTTCTGATAACGGTGAACTCGGATCCGAGAAGCCCAAGG
AAGGATTGAAGAGAGGAGATGTCAACTCAAAGAAGCAAAAGCAGGCCGAA
GACTCGGCCAATGCGGAGCGCTCATCCGCCAAGTCGGCTGAAGAGGCAGA
AGCGCGCAAGAAGTTGAAGGAGGAAAAGAAGGCCCAGAAGAAAGCCGCTC
AGAAGGAGAAGAAGAAGGCCAAGGAAGCCGCTAGGAAGGTCAAGGTAGCC
GAGCAGTCAGAAGAGACCGAAACACCTGCTGTGCAAAAATCCGAGTCGAC
CCCCGCCAACAAGACCAAGGAACAAAAACAAAAACAAGAGGACAGCGATA
GTGATGACAACGAAAGTGTGGACGGCGTCCCCGCCGAAGAACTCTCGCTC
GATTTCAGCGCTGAACAAGAAGAACAACCATCGTCTTCTGCGTCCACCCC
GAACTCCCCTGGGTTCGATGCTTCCAATCCCCAATCGGGCAGCTCTTCCA
TATCCTCCATTGTTCCCCCCACCGAAGCCTCCAAATCCTCCACCTCCGAA
CCCAAGCCTCTCAAGCCTACCCCCGATGAGCTAAAGCAACGGTTACAGAA
GCGGCTCGATGAACTTCGCGCAGCCCGCCATGCCGACGGGCTTAACGGAA
AGCCCGCCAGGAACCGTCAAGAACTAATTGAGGCTCGACGCCAAAAAGCC
GAGCAACGCAAAGCGCACAAGAAGGAGCTGCGCCAGAAGGCTAGAGAAGA
AGAGCAACGGCTGAAGGATGAAGCCATGGCCCGACGCTTCTCTCCTGGCG
GCTCGGGATCCCTTCTCGCATCCCCGCGCTCCCCTGCTGACTCTGTCGGC
TCGAACAACAACTTCGCTTTTGGCCGCGTTGTCTTCGCAGATGGCCAACT
TGCTGACCCCAGTCTTTCCGGAGTCCGGGAGCAACCTAAGAGCCACGGTC
CCAAAGACCCCGCCGCAGCCCTGAAGGCTGTTGAAGCGAAGAAGGCCAAG
CTTGCCGCCATGGACGAGGAGAAGCGGGCCGATATTGAGGAGAAGGACCT
GTGGCTTAACGCGAAGAAGCGGGCACATGGCGAACGCGTCCGTGACGACA
CATCATTGCTGAAGAAGGCGCTCAAGCGCAAGGAGTCGGCGAAGAAGAAG
TCTGAGCGCGAATGGAAGGAGCGTCTGGAAGCCGTGAAGAAGGGCAAGGA
CATGAGACAGCAGAAGCGTGAAGAGAACCTCCGGAAGCGCCGAGAGGATA
AGGGCAACAAGGGTGGCGGCAAGAAGCATGCCGGAGGTAAGAAGAAGTCC
AGACCGGGCTTTGAGGGCAGCTTCAAGGCCAAGTCTGGAGGCAAGAAATA
A back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011683-T1.utr3p1 | KJC3_011683-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029190 |
| DBxref | PFAM:PF04935 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1310744..1313142 + |
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