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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1332198..1334570- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011692-T1 ID=KJC3_011692-T1|Name=KJC3_011692-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2373bp|location=Sequence derived from alignment at ch8:1332198..1334570- (Aspergillus niger KJC3)
TCCTGGGATGCGATTTCTCCGCTTCGTGTGTAGCTTCCCCCCCACTCAAT
CTGGTCTCTTTCCTCTCTTCTCCTCACCTCTTCGAGCTCATCTCAATCTC
ATCTTCTTGTTTCCTCACCTGCTTATCTTTATTCGGTTTCTTTTCGTCAA
CTTAGTACTATTGCCGGCTCCTTATTCACACACTCTCTCTCTCTCTCTTT
GGTTTCCCTGGAAAATGGTTCCGGTTCGCTCCTAGCCACCCCTGCTAGTC
ACCCACTTCAGACTTCCGCTTTTCCATGGGATCCAGTCCCTTCCCAGGCC
TGAGACCCGGCTCTGCAAGAAACCTTGCGCTGTCGCTCGTTCCATGGTTC
ATTGGGAGCCTGACTTTTGGTCGGCCCTTGTTTTGGCGACCCAGATTTGC
CCCGGTGCTGGATGTCTCGTCTAGACTCGGCCTTTGGCTGGCTGAGCTGT
TGTGACCTGACAGCTAAACTTCGCTGCTTGAACCACGCCCGGTGTCAACT
CTACTGACGGTCTGCTCACTGTTGGATGCCCCTCCTTGGCTTGCCGTTAA
TTCAAGAGCTGCCATTTTATTTAACTTCAACCCCCCGTCTTTTCTGTTCC
CCCTTTCTATTATTGTTTTCTTATGTACAAGGCGTGGTGAAACATCTCCC
TCCTGCCTCAAAACTGCTGTCGATCTTGCAGTCATCTGCTCAGTCTCCCC
TGCTTACGCACGCCGCGCCACACATCACACCATACTGCTACACTGCTACA
CTGCTTTCTCCGTCACTATCCGCTACACACACTCTCACGATGGGCTCCCC
CGCCATCGATGTTGATGTTTGTCCCAATCCCCGCACAAAGGAGGAGAACC
AGGAACGGTAGGCTATCTTTTTGGCCACTTTTTTCTCTCTGCCTGCAAAT
CCGCTGACGAGGAAACAGTGCCTTCATAGCCGCCTCCCGCCGTAAAGACC
GCAGCTTAGATGCTCGCGTGGAATCGGCCAACCGGGCCTCCAGCCTGCAC
AAGCAACGGACCGGCAAGGCTCTCCTCATCAGCCGGGAAATCGTTGAACG
CGAGGCCATGTACGAAGAGGTCGATGACCGCTACCAAGAGAAAATCAACC
GTATGCTGCACGCTCAGTCGATGCAGCTGCAAACCGAGTTCAACCGCAAT
CTCATGGCTGCTTTTGCGAACCGTCCAAGTGCTCTGCACCAGCGTCGGGC
CAGCTCCCACCTCAACCCGCGGGCATCGCTCAACGGCATCCGCAAGATGA
GTCTGGACTTGTCTGGGCTTCGTGCCTCTGTCTCCGACGGCATGAACACC
GGACCAATGACCAGTCCGTTGGGACCACACCAGGGTAGCTATGTGCTTTC
CCCCACATACGACGGAACTTCCCAGTCGCCGTCGTATCCCAGCGTCGTCC
CCGCGTCGTCGGGCCAACTACCATCCTACCTCACCCAGACCGCGGGTGGA
CCCACCTGGCCGGCGCAGCTGAACGGGCCGCAGCCCATGCGATCGCCTTG
GACAGGAGGGTTCGTGTCGCCGTCACAGCACATCCCGGCCACGACGATGG
GCGAGATGGGCGCCATGCCGGTCCGTCAGTTCCGGGACCGCATGGGGTCG
GCGCCGGTCATTCCCGTTCACACGATGCCTTCCCCTTTGCTTGCAACTCC
CGCAGCATCTAGCACTAGTGCTACGGTGCCTCCCACAACAACAACAACGT
CCTCCTCGTCCTCATCGGCGTCGGCCGGTCCTCGACCGGCCCACCCGATG
TACCAGCACACTCGAGTCCGGTCAGAGCCTGGTCAAGCTCTGCGGACACA
AAGCCTGGCCAACCTGTCCCAGCTCAACTCCCCGCCAGGTATGCCGATGG
ATTCCACGGAGCCAGTGCCGACACCAGATTTGTGCCCGACACCCAGCACA
CCGCAGTCCCCTACATCGACGGGACAAGACCCGGGTCTCTGGGGGCTAGA
CCTGAACAAGGACGAGGGTGTGATGGGGTACGCACAGGAGCACCATATGG
ATCCTGACTATGAAGATTTCAGCCGGTTCGCATTTGGACTGGGCAGCGGT
CCGCAACTGCCGGAATCGGAAACGGCGTTTGATGAATTTTTTACCATGGA
GGATTTTCCCGTTAGTGCATGAGTACCCTATACGTTGAGTGATTACTTTT
GCTCTAAACTATGTCTTACTATTGATGTTTTTTTTTTATTGTGTGTTTGT
TATTGCTGCTGCTACTACTACTACTTCCTTTGGGTGGGGACTTGCTGGCT
TGGTTGGTGTCGTATGTACGAGGGGAGACAATACCCGGAGAGCGGCGTTG
ACCAGGTGATCCATAGCGAATGCTATACCTTTTAGCTTAACACATTCTTG
GTTGGTAATTCAGCCAGCTTCGT back to topCoding sequence (CDS) from alignment at ch8:1332198..1334570- >KJC3_011692-T1 ID=KJC3_011692-T1|Name=KJC3_011692-T1|organism=Aspergillus niger KJC3|type=CDS|length=3072bp|location=Sequence derived from alignment at ch8:1332198..1334570- (Aspergillus niger KJC3)
TGCCTTCATAGCCGCCTCCCGCCGTAAAGACCGCAGCTTAGATGCTCGCG
TGGAATCGGCCAACCGGGCCTCCAGCCTGCACAAGCAACGGACCGGCAAG
GCTCTCCTCATCAGCCGGGAAATCGTTGAACGCGAGGCCATGTACGAAGA
GGTCGATGACCGCTACCAAGAGAAAATCAACCGTATGCTGCACGCTCAGT
CGATGCAGCTGCAAACCGAGTTCAACCGCAATCTCATGGCTGCTTTTGCG
AACCGTCCAAGTGCTCTGCACCAGCGTCGGGCCAGCTCCCACCTCAACCC
GCGGGCATCGCTCAACGGCATCCGCAAGATGAGTCTGGACTTGTCTGGGC
TTCGTGCCTCTGTCTCCGACGGCATGAACACCGGACCAATGACCAGTCCG
TTGGGACCACACCAGGGTAGCTATGTGCTTTCCCCCACATACGACGGAAC
TTCCCAGTCGCCGTCGTATCCCAGCGTCGTCCCCGCGTCGTCGGGCCAAC
TACCATCCTACCTCACCCAGACCGCGGGTGGACCCACCTGGCCGGCGCAG
CTGAACGGGCCGCAGCCCATGCGATCGCCTTGGACAGGAGGGTTCGTGTC
GCCGTCACAGCACATCCCGGCCACGACGATGGGCGAGATGGGCGCCATGC
CGGTCCGTCAGTTCCGGGACCGCATGGGGTCGGCGCCGGTCATTCCCGTT
CACACGATGCCTTCCCCTTTGCTTGCAACTCCCGCAGCATCTAGCACTAG
TGCTACGGTGCCTCCCACAACAACAACAACGTCCTCCTCGTCCTCATCGG
CGTCGGCCGGTCCTCGACCGGCCCACCCGATGTACCAGCACACTCGAGTC
CGGTCAGAGCCTGGTCAAGCTCTGCGGACACAAAGCCTGGCCAACCTGTC
CCAGCTCAACTCCCCGCCAGGTATGCCGATGGATTCCACGGAGCCAGTGC
CGACACCAGATTTGTGCCCGACACCCAGCACACCGCAGTCCCCTACATCG
ACGGGACAAGACCCGGGTCTCTGGGGGCTAGACCTGAACAAGGACGAGGG
TGTGATGGGGTACGCACAGGAGCACCATATGGATCCTGACTATGAAGATT
TCAGCCGGTTCGCATTTGGACTGGGCAGCGGTCCGCAACTGCCGGAATCG
GAAACGGCGTTTGATGAATTTTTTACCATGGAGGATTTTCCCGTTAGTGC
ATGAATGCCCCTCCTTGGCTTGCCGTTAATTCAAGAGCTGCCATTTTATT
TAACTTCAACCCCCCGTCTTTTCTGTTCCCCCTTTCTATTATTGTTTTCT
TATGTACAAGGCGTGGTGAAACATCTCCCTCCTGCCTCAAAACTGCTGTC
GATCTTGCAGTCATCTGCTCAGTCTCCCCTGCTTACGCACGCCGCGCCAC
ACATCACACCATACTGCTACACTGCTACACTGCTTTCTCCGTCACTATCC
GCTACACACACTCTCACGATGGGCTCCCCCGCCATCGATGTTGATGTTTG
TCCCAATCCCCGCACAAAGGAGGAGAACCAGGAACGTGCCTTCATAGCCG
CCTCCCGCCGTAAAGACCGCAGCTTAGATGCTCGCGTGGAATCGGCCAAC
CGGGCCTCCAGCCTGCACAAGCAACGGACCGGCAAGGCTCTCCTCATCAG
CCGGGAAATCGTTGAACGCGAGGCCATGTACGAAGAGGTCGATGACCGCT
ACCAAGAGAAAATCAACCGTATGCTGCACGCTCAGTCGATGCAGCTGCAA
ACCGAGTTCAACCGCAATCTCATGGCTGCTTTTGCGAACCGTCCAAGTGC
TCTGCACCAGCGTCGGGCCAGCTCCCACCTCAACCCGCGGGCATCGCTCA
ACGGCATCCGCAAGATGAGTCTGGACTTGTCTGGGCTTCGTGCCTCTGTC
TCCGACGGCATGAACACCGGACCAATGACCAGTCCGTTGGGACCACACCA
GGGTAGCTATGTGCTTTCCCCCACATACGACGGAACTTCCCAGTCGCCGT
CGTATCCCAGCGTCGTCCCCGCGTCGTCGGGCCAACTACCATCCTACCTC
ACCCAGACCGCGGGTGGACCCACCTGGCCGGCGCAGCTGAACGGGCCGCA
GCCCATGCGATCGCCTTGGACAGGAGGGTTCGTGTCGCCGTCACAGCACA
TCCCGGCCACGACGATGGGCGAGATGGGCGCCATGCCGGTCCGTCAGTTC
CGGGACCGCATGGGGTCGGCGCCGGTCATTCCCGTTCACACGATGCCTTC
CCCTTTGCTTGCAACTCCCGCAGCATCTAGCACTAGTGCTACGGTGCCTC
CCACAACAACAACAACGTCCTCCTCGTCCTCATCGGCGTCGGCCGGTCCT
CGACCGGCCCACCCGATGTACCAGCACACTCGAGTCCGGTCAGAGCCTGG
TCAAGCTCTGCGGACACAAAGCCTGGCCAACCTGTCCCAGCTCAACTCCC
CGCCAGGTATGCCGATGGATTCCACGGAGCCAGTGCCGACACCAGATTTG
TGCCCGACACCCAGCACACCGCAGTCCCCTACATCGACGGGACAAGACCC
GGGTCTCTGGGGGCTAGACCTGAACAAGGACGAGGGTGTGATGGGGTACG
CACAGGAGCACCATATGGATCCTGACTATGAAGATTTCAGCCGGTTCGCA
TTTGGACTGGGCAGCGGTCCGCAACTGCCGGAATCGGAAACGGCGTTTGA
TGAATTTTTTACCATGGAGGATTTTCCCGTTAGTGCATGAATGCCCCTCC
TTGGCTTGCCGTTAATTCAAGAGCTGCCATTTTATTTAACTTCAACCCCC
CGTCTTTTCTGTTCCCCCTTTCTATTATTGTTTTCTTATGTACAAGGCGT
GGTGAAACATCTCCCTCCTGCCTCAAAACTGCTGTCGATCTTGCAGTCAT
CTGCTCAGTCTCCCCTGCTTACGCACGCCGCGCCACACATCACACCATAC
TGCTACACTGCTACACTGCTTTCTCCGTCACTATCCGCTACACACACTCT
CACGATGGGCTCCCCCGCCATCGATGTTGATGTTTGTCCCAATCCCCGCA
CAAAGGAGGAGAACCAGGAACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011692-T1.utr3p1 | KJC3_011692-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011692-T1.utr5p1 | KJC3_011692-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1332198..1334570 - |
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