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KJC3_011700-T1, KJC3_011700-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011700-T1
Unique NameKJC3_011700-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1355328..1356818-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011700-T1 ID=KJC3_011700-T1|Name=KJC3_011700-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1491bp|location=Sequence derived from alignment at ch8:1355328..1356818- (Aspergillus niger KJC3)
AGACGACTCCGGAGCCTTTACGACAACCAAACCCGACAGCCAAGTACGCG
ACAACTTCCCTTCCCCTTCTCCCTGACTTACATTCTCTGACCCGTTGCTG
CAGAGAAATCCGTCAAGATGGTCAAGAAGAGGGCGAACAAGTAAGACCGA
ACCCTTTCCTATCCCACCCATCCATGCCATGCCACATGCCATGTATACAT
ATACACAATCTACGCACACCTGAATGAAGACGGCCGCACGGAAAAATATT
CGCCATACATTTGCCGCAGAATGGCCCGGCTACCGTACAGTGTTGTGTGT
GATTTTGGGGAAAAAACAGAAGAAAATTGAAGAAATGGCGATGTTCAAAT
CGAAAACATGGAAAATTCGCAAAATTAAAGAAGAGACCGATAAACTAACC
TATTTCACAGCGGTCGTAACAAGAACGGCCGCGGCCACGTCAAGCCCGTG
CGCTGCTCCAACTGCGCTCGCTGCACTCCCAAGGACAAGGCCATCAAGAG
ATTCACCATCCGCAACATGGTCGAGTCCGCTGCCATCCGTACGTTCCACG
ATCTTGCTCCATTGATCTGAGTTCTTCCCGAAACCGTCCGCGCGCGCTGT
TTGTTCATTCCGAAAGAGCTGGGAAGTGGGGTGTTTTATGTATGCGTGTG
CGTATGCGTGTGTATGCAACAATTCGAAGCGAAATGAACTCGACCGGAAT
ACGACATCGGATAAGAAGAAAGAGGAATAGATACAACAGCGCGACGCACG
AGTGAACGGAATTCGACCCATCCTGAAAGACAACATCGGACTGACTGGTT
CTTTTTCCAACTCTCCAGGTGATATCTCGGACGCCTCCGTCTTCACCGAC
TACGCCGTCCCCAAGATGTACCTGAAGCTGCAGTACTGCGTCTCCTGCGC
TATCCACGGCAAGATTGTTCGGTACGCCACCACCCACTCAACAACGATGA
ATGCGTCGAATCATCATCGATTTCGAGAACAAACACAAGCTAATGATTAT
CCTATAGTGTCCGCTCCCGGGAAGGTCGTCGCAACCGTGCTCCCCCTCCT
CGTATCAGGTACAACAAGGATGGCAAGAAGCTGAACCCCCCTCAGGCCGC
CAAGGCTATGTAAGGAAGGAATGACAACGATTTCAAAAGAGATAAAAGAA
AAATGGAATTAGTTTAGGGGCCTTAACTGTTGCTTCTTATTATTTTTCTT
TATGTTGTCTGAAAAAAAACCAGAACTTCTTTACTACTTTATGCGGAATT
CTTAAATGGAAATGAACGGGTTTCAGTTTCGGGGTTGAAATGAATATGCG
CGGAGTCGTGTGTGAAAGATGAAATTCTATACCAATTTTTAAAACGAACA
AACGAAATTTTCTAAGCAACTTATCTTGGTTAAGTAAAGTATCAAGAGTG
ACATTCATCCGATGGATACTGTATGGAGGGTTGGTGTCGAGCTGGTAATC
GGATATTGATGTACATTATTGATCTGTTATCAGAATTTCGG
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Coding sequence (CDS) from alignment at ch8:1355328..1356818-

>KJC3_011700-T1 ID=KJC3_011700-T1|Name=KJC3_011700-T1|organism=Aspergillus niger KJC3|type=CDS|length=1440bp|location=Sequence derived from alignment at ch8:1355328..1356818- (Aspergillus niger KJC3)
TGTCCGCTCCCGGGAAGGTCGTCGCAACCGTGCTCCCCCTCCTCGTATCA
GGTACAACAAGGATGGCAAGAAGCTGAACCCCCCTCAGGCCGCCAAGGCT
ATGTAAGTGATATCTCGGACGCCTCCGTCTTCACCGACTACGCCGTCCCC
AAGATGTACCTGAAGCTGCAGTACTGCGTCTCCTGCGCTATCCACGGCAA
GATTGTTCGCGGTCGTAACAAGAACGGCCGCGGCCACGTCAAGCCCGTGC
GCTGCTCCAACTGCGCTCGCTGCACTCCCAAGGACAAGGCCATCAAGAGA
TTCACCATCCGCAACATGGTCGAGTCCGCTGCCATCCATGGTCAAGAAGA
GGGCGAACAATGTCCGCTCCCGGGAAGGTCGTCGCAACCGTGCTCCCCCT
CCTCGTATCAGGTACAACAAGGATGGCAAGAAGCTGAACCCCCCTCAGGC
CGCCAAGGCTATGTAAGTGATATCTCGGACGCCTCCGTCTTCACCGACTA
CGCCGTCCCCAAGATGTACCTGAAGCTGCAGTACTGCGTCTCCTGCGCTA
TCCACGGCAAGATTGTTCGCGGTCGTAACAAGAACGGCCGCGGCCACGTC
AAGCCCGTGCGCTGCTCCAACTGCGCTCGCTGCACTCCCAAGGACAAGGC
CATCAAGAGATTCACCATCCGCAACATGGTCGAGTCCGCTGCCATCCATG
GTCAAGAAGAGGGCGAACAATGTCCGCTCCCGGGAAGGTCGTCGCAACCG
TGCTCCCCCTCCTCGTATCAGGTACAACAAGGATGGCAAGAAGCTGAACC
CCCCTCAGGCCGCCAAGGCTATGTAAGTGATATCTCGGACGCCTCCGTCT
TCACCGACTACGCCGTCCCCAAGATGTACCTGAAGCTGCAGTACTGCGTC
TCCTGCGCTATCCACGGCAAGATTGTTCGCGGTCGTAACAAGAACGGCCG
CGGCCACGTCAAGCCCGTGCGCTGCTCCAACTGCGCTCGCTGCACTCCCA
AGGACAAGGCCATCAAGAGATTCACCATCCGCAACATGGTCGAGTCCGCT
GCCATCCATGGTCAAGAAGAGGGCGAACAATGTCCGCTCCCGGGAAGGTC
GTCGCAACCGTGCTCCCCCTCCTCGTATCAGGTACAACAAGGATGGCAAG
AAGCTGAACCCCCCTCAGGCCGCCAAGGCTATGTAAGTGATATCTCGGAC
GCCTCCGTCTTCACCGACTACGCCGTCCCCAAGATGTACCTGAAGCTGCA
GTACTGCGTCTCCTGCGCTATCCACGGCAAGATTGTTCGCGGTCGTAACA
AGAACGGCCGCGGCCACGTCAAGCCCGTGCGCTGCTCCAACTGCGCTCGC
TGCACTCCCAAGGACAAGGCCATCAAGAGATTCACCATCCGCAACATGGT
CGAGTCCGCTGCCATCCATGGTCAAGAAGAGGGCGAACAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS26KJC3_011700Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011700-T1KJC3_011700-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011700-T1.cdsKJC3_011700-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011700-T1.utr3p1KJC3_011700-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011700-T1.exon5KJC3_011700-T1.exon5Aspergillus niger KJC3exon
KJC3_011700-T1.exon4KJC3_011700-T1.exon4Aspergillus niger KJC3exon
KJC3_011700-T1.exon3KJC3_011700-T1.exon3Aspergillus niger KJC3exon
KJC3_011700-T1.exon2KJC3_011700-T1.exon2Aspergillus niger KJC3exon
KJC3_011700-T1.exon1KJC3_011700-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011700-T1.utr5p2KJC3_011700-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_011700-T1.utr5p1KJC3_011700-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265GYK
DBxrefInterPro:IPR000892
DBxrefInterPro:IPR038551
DBxrefPFAM:PF01283
Product40S ribosomal protein S26
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1355328..1356818 -
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