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KJC3_011705-T1, KJC3_011705-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011705-T1
Unique NameKJC3_011705-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1368956..1370259+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011705-T1 ID=KJC3_011705-T1|Name=KJC3_011705-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1304bp|location=Sequence derived from alignment at ch8:1368956..1370259+ (Aspergillus niger KJC3)
CCTTCTCGACCAGGCCGTTACAAAAAAGTCTCCCGTCCTTCTCTTCCTCT
TTTTATCCCCATCCCTCTCGAGACTCCAGTCCAGTCCAACCCCCCCGTCG
ACCACCATGTCTACTGCCGAGCTCGCTTGCTCCTACGCCGCCCTCATCCT
CGCCGATGACGGCATCGAGGTCACCGTACGTATTGACCCTTGATTTCAAC
CCGGGCATTGGAATGGCAGGCAAGGATAAGACAAAGTGCTGGGAGAGAGC
AGGAAAAAAAAAAGGGTGTCGCGAGAAAGAGATGGATCTGGAGGATATCA
AGGATTCGGAACATGCAACAATTGCTGGGTTGAAAAATGCAAGGTTACAG
GATCAAATTTGGACTAATAATGCAATTTCTTGAATATAGGCCGACAAGCT
CCAGACTCTCCTGTCTGCCGCCAAGGTTCCCGAGGTTGAGCCCATCTGGA
CTTCCATCTTCGCCAAGGTAAATTAAATCCGTCCAAGCTTCGCAACACAT
CTCAGTTTCATCATCGCATGCGATTCGCGATTCACCCGATTATCAATCAT
CACCACCCTGGAATCAAACACACAAAACTTACACGTCGGTTTTTTCCAAT
AGGCTCTCGAGGGCAAGGACATCAAGGAGCTCCTGACCAACGTCGGCTCC
GCTGGCCCTGCCGCCCCCGCTGCTGCTGCCGGTGGTGCTGCTGCCCCCGC
TGAGGCTGCTGCCGCTGAGGAGAAGAAGGAAGAAGGTACGGAACATCCAA
CATACCCATTGTCTTGGCGATTGCAATGGCAGGGCATAGGAAAAGGAACA
CTTGGACTAACTTCTATACAGAGAAGGAGGAGTCCGACGAGGACATGGGC
TTCGGTCTTTTCGACTAAGCGTCTTCAACCGTTCGGGTTTCCTAATTTTT
CCTTTTCTATCTCGTTTCCTTACTACCTCCTTTTCGCCCCCTCGCATTTC
TTGTACCTGATACTACGCGACCGCACGAAGACCAAAAAGGGAAAATTAAA
AGAAAGAATGAACGGACAAGGACATCCGGTGGGACTGGGCGCTCTGCTCG
CATGATAGGCTCCGTCGTGAAAAAGAACCAGAAGTGTGTCTCTTACGTAG
TACTTTCTGGGGGGGGAACCGCGATGCCGTTGGGATTCCGGTTTTTCCTG
GGGGGGCGAAGAGATTCGGCTTCGGCTCCTCTTGTGTCTCTGATGTTGTG
TGTGCTTGTTGCTACTATGCTATATGGCGTGTTCTTTCGAGCTTAGGTGC
CCCAGCTCTCATGCAATGTCTGTCATGCGACCATGAGCAAAACCTCGTTC
CCAC
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Coding sequence (CDS) from alignment at ch8:1368956..1370259+

>KJC3_011705-T1 ID=KJC3_011705-T1|Name=KJC3_011705-T1|organism=Aspergillus niger KJC3|type=CDS|length=1308bp|location=Sequence derived from alignment at ch8:1368956..1370259+ (Aspergillus niger KJC3)
ATGTCTACTGCCGAGCTCGCTTGCTCCTACGCCGCCCTCATCCTCGCCGA
TGACGGCATCGAGGTCACCGCCGACAAGCTCCAGACTCTCCTGTCTGCCG
CCAAGGTTCCCGAGGTTGAGCCCATCTGGACTTCCATCTTCGCCAAGGCT
CTCGAGGGCAAGGACATCAAGGAGCTCCTGACCAACGTCGGCTCCGCTGG
CCCTGCCGCCCCCGCTGCTGCTGCCGGTGGTGCTGCTGCCCCCGCTGAGG
CTGCTGCCGCTGAGGAGAAGAAGGAAGAAGAGAAGGAGGAGTCCGACGAG
GACATGGGCTTCGGTCTTTTCGACTAAATGTCTACTGCCGAGCTCGCTTG
CTCCTACGCCGCCCTCATCCTCGCCGATGACGGCATCGAGGTCACCGCCG
ACAAGCTCCAGACTCTCCTGTCTGCCGCCAAGGTTCCCGAGGTTGAGCCC
ATCTGGACTTCCATCTTCGCCAAGGCTCTCGAGGGCAAGGACATCAAGGA
GCTCCTGACCAACGTCGGCTCCGCTGGCCCTGCCGCCCCCGCTGCTGCTG
CCGGTGGTGCTGCTGCCCCCGCTGAGGCTGCTGCCGCTGAGGAGAAGAAG
GAAGAAGAGAAGGAGGAGTCCGACGAGGACATGGGCTTCGGTCTTTTCGA
CTAAATGTCTACTGCCGAGCTCGCTTGCTCCTACGCCGCCCTCATCCTCG
CCGATGACGGCATCGAGGTCACCGCCGACAAGCTCCAGACTCTCCTGTCT
GCCGCCAAGGTTCCCGAGGTTGAGCCCATCTGGACTTCCATCTTCGCCAA
GGCTCTCGAGGGCAAGGACATCAAGGAGCTCCTGACCAACGTCGGCTCCG
CTGGCCCTGCCGCCCCCGCTGCTGCTGCCGGTGGTGCTGCTGCCCCCGCT
GAGGCTGCTGCCGCTGAGGAGAAGAAGGAAGAAGAGAAGGAGGAGTCCGA
CGAGGACATGGGCTTCGGTCTTTTCGACTAAATGTCTACTGCCGAGCTCG
CTTGCTCCTACGCCGCCCTCATCCTCGCCGATGACGGCATCGAGGTCACC
GCCGACAAGCTCCAGACTCTCCTGTCTGCCGCCAAGGTTCCCGAGGTTGA
GCCCATCTGGACTTCCATCTTCGCCAAGGCTCTCGAGGGCAAGGACATCA
AGGAGCTCCTGACCAACGTCGGCTCCGCTGGCCCTGCCGCCCCCGCTGCT
GCTGCCGGTGGTGCTGCTGCCCCCGCTGAGGCTGCTGCCGCTGAGGAGAA
GAAGGAAGAAGAGAAGGAGGAGTCCGACGAGGACATGGGCTTCGGTCTTT
TCGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011705KJC3_011705Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011705-T1KJC3_011705-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011705-T1.utr5p1KJC3_011705-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011705-T1.exon1KJC3_011705-T1.exon1Aspergillus niger KJC3exon
KJC3_011705-T1.exon2KJC3_011705-T1.exon2Aspergillus niger KJC3exon
KJC3_011705-T1.exon3KJC3_011705-T1.exon3Aspergillus niger KJC3exon
KJC3_011705-T1.exon4KJC3_011705-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011705-T1.cdsKJC3_011705-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011705-T1.utr3p1KJC3_011705-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027534
DBxrefInterPro:IPR038716
DBxrefPFAM:PF00428
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1368956..1370259 +
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