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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1478480..1480700- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011741-T1 ID=KJC3_011741-T1|Name=KJC3_011741-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2221bp|location=Sequence derived from alignment at ch8:1478480..1480700- (Aspergillus niger KJC3) GGAGGATCACATCTGCCAAACCTCTCGTGATTCCCATCTTCTTTTCATCC
CATTCTCCGCTGTCTCGTGCTCTACTTCGGTATCTTGCACCTCTACTCTC
TCCTTTTCACCGTCTACCAAACCAACCACCGTCTTTCCCAATCCCCTTAT
CTCCATCAGATCGCCTACTATGACTTCTGAGGTATGTTATTCCACCCCCT
CAGCCTGACCCCTCTCTCTGCTCTGGCGGCTTCACCTGGCGTCCGTCCAG
TTGTAGCCGTTTAATTCCTAGCCGCATGTATTCCTATGGCTGGGAATTCT
CTTGTGCTCTCTCAGTCGTTGTGTCGCGATTAGTCTGGACTCAGCTAACT
GTTCTCCCCCCTTTACTTGCAGCGTGAGAAGTAAGGATCCAGACCCGTCT
CGACCAGTGACCGACAACAGCAACACTGACACTTCACCCTTCTGCAGCAA
GACGTTCCTCGCCCGGCTCTGTGAGCAGGCTGAGCGCTACGATGGTAAGA
TGCCTGTTTACTGCTCTGCCATGTTGGCTTCACATGCTGATCCCTACCGC
CTATAGAGATGGTCACGTACATGAAGGTCAGTAGCCGCCTGTCAGCCCCT
GGGCTCTCAACAAGCATAATCGCTAACTATTGTACAGGAAGTCGCCAACG
TATGACCCCCTTACCTCCCTCTGACGAGAAGCCCCCCCTTTTCCCCGTAA
CCCCCTTTTACTCGTGGGTCAAGCTGACCCCGCATCAGATTGGAGGCGAG
CTTTCCGTCGATGAGCGTAACCTTCTCTCCGTTGCTTACAAGAACGTGGT
CGGTACCCGCCGTGCCTCGTGGCGTATTATCTCCTCCATTGAGCAGAAGG
AGGAGTCCAAGGGCTCTGAGCAGCACGTTTCGATCATCCGTGACTACCGC
CAGAAGATCGAGACCGAGCTCGAGAAGGTCTGCCAGGATGTCCTCGATGT
TCTCGATGAGTCCCTCATCCCCAAGGCCGAGACTGGCGAGTCCAAGGTCT
TCTACTACAAGATGTGAGTCTTGGTTCTCAGGGGGAAAGAGCATTTACTG
GCAAGTAGTAAAAGGGCAGAGGCTGACTGTTGTACGAACTGTAGGAAGGG
TGACTACCACCGCTACCTCGCTGAGTTTGCCTCTGGCAACAAGCGCAAGG
TTGCTGCCACTGCTGCCCACGAGGCTTACAAGGTGGGCTCTTCAAGTTGC
GTGCTATATCGGAGGACTCGCACTAACGACCGTGACAGAATGCTACCGAT
GTCGCCCAGACCGATCTTACTCCTACCCACCCCATCCGCCTTGGTCTCGC
CCTGAACTTCTCCGTCTTCTACTACGAGATCCTGAACTCCCCCGATCGTG
CCTGCCACCTTGCCAAGCAGGCGTTCGATGACGCCATTGCGGAGCTCGAC
TCGCTTTCGGAGGAGAGCTACCGTGATAGCACCCTGATCATGCAGCTCCT
GCGTGACAACCTTACTCTGTGGACCTCTTCTGATGGCAACGAGCCCGAGG
GCGCTGCCCCCAAGGAGGACAAGCCCGAGGAGGAGACCGCCGCCGCCCCC
GAGGACAAGGCTGAGGAGCCCAAGCCTGCTGCCCCTGAGTCCTAGATGGG
TGGTGTGTGTTCTTGTGTATCAAAAACAGTTGTGTCCCCGACGTGCCAGT
TCAGGTGTGCGAATACTACCCGGAAACGCTTATGAAGGTCTGCTTTTAGC
TGTGCGAAGGGTCTGGACCGGCACATATCTTCCACTTGTTCGGGATCCTG
TGGGTCGGCCGGCGGAGTTTGATGTTTGGAGAGCGAAGAAAAGGGGCTGA
GTGGAATTTACCTCTCTTTTATTCTCTCTTTATTCACCCCCAGCAAGATA
CAGTGTCTTATTTCAACTTTTTTATTCACCCCACGCCCCTTTTCCCGATT
TCCCCCCTGCTGTTTCGCTCGTACGTGTTAAGAGCCTTAAGCTTTACAAT
ATCTCAAATCAAAGTAACCAGTTCTCTCAATCCCAAGAAGACCCTGCCGG
GAATCAATTAATTATCAAACGACTCTTAGATTTTGTGTACTTCTATGAGC
CGCGATCCCATACTGCTCCCATAGAAGTCTTTAGCGTCAGCCTGATAAAT
AACCGCCTTACACACTACCAAATACCCACTGCCCGTGCAGAACATTTTCT
ACCTCACCACCTCCCAGTACTCGTTTAACACTACGTATAGGTTAAACACT
TTAAAAAGTTAAGGACTTAGG back to topCoding sequence (CDS) from alignment at ch8:1478480..1480700- >KJC3_011741-T1 ID=KJC3_011741-T1|Name=KJC3_011741-T1|organism=Aspergillus niger KJC3|type=CDS|length=6552bp|location=Sequence derived from alignment at ch8:1478480..1480700- (Aspergillus niger KJC3) AATGCTACCGATGTCGCCCAGACCGATCTTACTCCTACCCACCCCATCCG CCTTGGTCTCGCCCTGAACTTCTCCGTCTTCTACTACGAGATCCTGAACT CCCCCGATCGTGCCTGCCACCTTGCCAAGCAGGCGTTCGATGACGCCATT GCGGAGCTCGACTCGCTTTCGGAGGAGAGCTACCGTGATAGCACCCTGAT CATGCAGCTCCTGCGTGACAACCTTACTCTGTGGACCTCTTCTGATGGCA ACGAGCCCGAGGGCGCTGCCCCCAAGGAGGACAAGCCCGAGGAGGAGACC GCCGCCGCCCCCGAGGACAAGGCTGAGGAGCCCAAGCCTGCTGCCCCTGA GTCCTAGGAAGGGTGACTACCACCGCTACCTCGCTGAGTTTGCCTCTGGC AACAAGCGCAAGGTTGCTGCCACTGCTGCCCACGAGGCTTACAAGATTGG AGGCGAGCTTTCCGTCGATGAGCGTAACCTTCTCTCCGTTGCTTACAAGA ACGTGGTCGGTACCCGCCGTGCCTCGTGGCGTATTATCTCCTCCATTGAG CAGAAGGAGGAGTCCAAGGGCTCTGAGCAGCACGTTTCGATCATCCGTGA CTACCGCCAGAAGATCGAGACCGAGCTCGAGAAGGTCTGCCAGGATGTCC TCGATGTTCTCGATGAGTCCCTCATCCCCAAGGCCGAGACTGGCGAGTCC AAGGTCTTCTACTACAAGATGAAGTCGCCAACAGATGGTCACGTACATGA AGCAAGACGTTCCTCGCCCGGCTCTGTGAGCAGGCTGAGCGCTACGATGC GTGAGAAATGACTTCTGAGAATGCTACCGATGTCGCCCAGACCGATCTTA CTCCTACCCACCCCATCCGCCTTGGTCTCGCCCTGAACTTCTCCGTCTTC TACTACGAGATCCTGAACTCCCCCGATCGTGCCTGCCACCTTGCCAAGCA GGCGTTCGATGACGCCATTGCGGAGCTCGACTCGCTTTCGGAGGAGAGCT ACCGTGATAGCACCCTGATCATGCAGCTCCTGCGTGACAACCTTACTCTG TGGACCTCTTCTGATGGCAACGAGCCCGAGGGCGCTGCCCCCAAGGAGGA CAAGCCCGAGGAGGAGACCGCCGCCGCCCCCGAGGACAAGGCTGAGGAGC CCAAGCCTGCTGCCCCTGAGTCCTAGGAAGGGTGACTACCACCGCTACCT CGCTGAGTTTGCCTCTGGCAACAAGCGCAAGGTTGCTGCCACTGCTGCCC ACGAGGCTTACAAGATTGGAGGCGAGCTTTCCGTCGATGAGCGTAACCTT CTCTCCGTTGCTTACAAGAACGTGGTCGGTACCCGCCGTGCCTCGTGGCG TATTATCTCCTCCATTGAGCAGAAGGAGGAGTCCAAGGGCTCTGAGCAGC ACGTTTCGATCATCCGTGACTACCGCCAGAAGATCGAGACCGAGCTCGAG AAGGTCTGCCAGGATGTCCTCGATGTTCTCGATGAGTCCCTCATCCCCAA GGCCGAGACTGGCGAGTCCAAGGTCTTCTACTACAAGATGAAGTCGCCAA CAGATGGTCACGTACATGAAGCAAGACGTTCCTCGCCCGGCTCTGTGAGC AGGCTGAGCGCTACGATGCGTGAGAAATGACTTCTGAGAATGCTACCGAT GTCGCCCAGACCGATCTTACTCCTACCCACCCCATCCGCCTTGGTCTCGC CCTGAACTTCTCCGTCTTCTACTACGAGATCCTGAACTCCCCCGATCGTG CCTGCCACCTTGCCAAGCAGGCGTTCGATGACGCCATTGCGGAGCTCGAC TCGCTTTCGGAGGAGAGCTACCGTGATAGCACCCTGATCATGCAGCTCCT GCGTGACAACCTTACTCTGTGGACCTCTTCTGATGGCAACGAGCCCGAGG GCGCTGCCCCCAAGGAGGACAAGCCCGAGGAGGAGACCGCCGCCGCCCCC GAGGACAAGGCTGAGGAGCCCAAGCCTGCTGCCCCTGAGTCCTAGGAAGG GTGACTACCACCGCTACCTCGCTGAGTTTGCCTCTGGCAACAAGCGCAAG GTTGCTGCCACTGCTGCCCACGAGGCTTACAAGATTGGAGGCGAGCTTTC CGTCGATGAGCGTAACCTTCTCTCCGTTGCTTACAAGAACGTGGTCGGTA CCCGCCGTGCCTCGTGGCGTATTATCTCCTCCATTGAGCAGAAGGAGGAG TCCAAGGGCTCTGAGCAGCACGTTTCGATCATCCGTGACTACCGCCAGAA GATCGAGACCGAGCTCGAGAAGGTCTGCCAGGATGTCCTCGATGTTCTCG ATGAGTCCCTCATCCCCAAGGCCGAGACTGGCGAGTCCAAGGTCTTCTAC TACAAGATGAAGTCGCCAACAGATGGTCACGTACATGAAGCAAGACGTTC CTCGCCCGGCTCTGTGAGCAGGCTGAGCGCTACGATGCGTGAGAAATGAC TTCTGAGAATGCTACCGATGTCGCCCAGACCGATCTTACTCCTACCCACC CCATCCGCCTTGGTCTCGCCCTGAACTTCTCCGTCTTCTACTACGAGATC CTGAACTCCCCCGATCGTGCCTGCCACCTTGCCAAGCAGGCGTTCGATGA CGCCATTGCGGAGCTCGACTCGCTTTCGGAGGAGAGCTACCGTGATAGCA CCCTGATCATGCAGCTCCTGCGTGACAACCTTACTCTGTGGACCTCTTCT GATGGCAACGAGCCCGAGGGCGCTGCCCCCAAGGAGGACAAGCCCGAGGA GGAGACCGCCGCCGCCCCCGAGGACAAGGCTGAGGAGCCCAAGCCTGCTG CCCCTGAGTCCTAGGAAGGGTGACTACCACCGCTACCTCGCTGAGTTTGC CTCTGGCAACAAGCGCAAGGTTGCTGCCACTGCTGCCCACGAGGCTTACA AGATTGGAGGCGAGCTTTCCGTCGATGAGCGTAACCTTCTCTCCGTTGCT TACAAGAACGTGGTCGGTACCCGCCGTGCCTCGTGGCGTATTATCTCCTC CATTGAGCAGAAGGAGGAGTCCAAGGGCTCTGAGCAGCACGTTTCGATCA TCCGTGACTACCGCCAGAAGATCGAGACCGAGCTCGAGAAGGTCTGCCAG GATGTCCTCGATGTTCTCGATGAGTCCCTCATCCCCAAGGCCGAGACTGG CGAGTCCAAGGTCTTCTACTACAAGATGAAGTCGCCAACAGATGGTCACG TACATGAAGCAAGACGTTCCTCGCCCGGCTCTGTGAGCAGGCTGAGCGCT ACGATGCGTGAGAAATGACTTCTGAGAATGCTACCGATGTCGCCCAGACC GATCTTACTCCTACCCACCCCATCCGCCTTGGTCTCGCCCTGAACTTCTC CGTCTTCTACTACGAGATCCTGAACTCCCCCGATCGTGCCTGCCACCTTG CCAAGCAGGCGTTCGATGACGCCATTGCGGAGCTCGACTCGCTTTCGGAG GAGAGCTACCGTGATAGCACCCTGATCATGCAGCTCCTGCGTGACAACCT TACTCTGTGGACCTCTTCTGATGGCAACGAGCCCGAGGGCGCTGCCCCCA AGGAGGACAAGCCCGAGGAGGAGACCGCCGCCGCCCCCGAGGACAAGGCT GAGGAGCCCAAGCCTGCTGCCCCTGAGTCCTAGGAAGGGTGACTACCACC GCTACCTCGCTGAGTTTGCCTCTGGCAACAAGCGCAAGGTTGCTGCCACT GCTGCCCACGAGGCTTACAAGATTGGAGGCGAGCTTTCCGTCGATGAGCG TAACCTTCTCTCCGTTGCTTACAAGAACGTGGTCGGTACCCGCCGTGCCT CGTGGCGTATTATCTCCTCCATTGAGCAGAAGGAGGAGTCCAAGGGCTCT GAGCAGCACGTTTCGATCATCCGTGACTACCGCCAGAAGATCGAGACCGA GCTCGAGAAGGTCTGCCAGGATGTCCTCGATGTTCTCGATGAGTCCCTCA TCCCCAAGGCCGAGACTGGCGAGTCCAAGGTCTTCTACTACAAGATGAAG TCGCCAACAGATGGTCACGTACATGAAGCAAGACGTTCCTCGCCCGGCTC TGTGAGCAGGCTGAGCGCTACGATGCGTGAGAAATGACTTCTGAGAATGC TACCGATGTCGCCCAGACCGATCTTACTCCTACCCACCCCATCCGCCTTG GTCTCGCCCTGAACTTCTCCGTCTTCTACTACGAGATCCTGAACTCCCCC GATCGTGCCTGCCACCTTGCCAAGCAGGCGTTCGATGACGCCATTGCGGA GCTCGACTCGCTTTCGGAGGAGAGCTACCGTGATAGCACCCTGATCATGC AGCTCCTGCGTGACAACCTTACTCTGTGGACCTCTTCTGATGGCAACGAG CCCGAGGGCGCTGCCCCCAAGGAGGACAAGCCCGAGGAGGAGACCGCCGC CGCCCCCGAGGACAAGGCTGAGGAGCCCAAGCCTGCTGCCCCTGAGTCCT AGGAAGGGTGACTACCACCGCTACCTCGCTGAGTTTGCCTCTGGCAACAA GCGCAAGGTTGCTGCCACTGCTGCCCACGAGGCTTACAAGATTGGAGGCG AGCTTTCCGTCGATGAGCGTAACCTTCTCTCCGTTGCTTACAAGAACGTG GTCGGTACCCGCCGTGCCTCGTGGCGTATTATCTCCTCCATTGAGCAGAA GGAGGAGTCCAAGGGCTCTGAGCAGCACGTTTCGATCATCCGTGACTACC GCCAGAAGATCGAGACCGAGCTCGAGAAGGTCTGCCAGGATGTCCTCGAT GTTCTCGATGAGTCCCTCATCCCCAAGGCCGAGACTGGCGAGTCCAAGGT CTTCTACTACAAGATGAAGTCGCCAACAGATGGTCACGTACATGAAGCAA GACGTTCCTCGCCCGGCTCTGTGAGCAGGCTGAGCGCTACGATGCGTGAG AAATGACTTCTGAGAATGCTACCGATGTCGCCCAGACCGATCTTACTCCT ACCCACCCCATCCGCCTTGGTCTCGCCCTGAACTTCTCCGTCTTCTACTA CGAGATCCTGAACTCCCCCGATCGTGCCTGCCACCTTGCCAAGCAGGCGT TCGATGACGCCATTGCGGAGCTCGACTCGCTTTCGGAGGAGAGCTACCGT GATAGCACCCTGATCATGCAGCTCCTGCGTGACAACCTTACTCTGTGGAC CTCTTCTGATGGCAACGAGCCCGAGGGCGCTGCCCCCAAGGAGGACAAGC CCGAGGAGGAGACCGCCGCCGCCCCCGAGGACAAGGCTGAGGAGCCCAAG CCTGCTGCCCCTGAGTCCTAGGAAGGGTGACTACCACCGCTACCTCGCTG AGTTTGCCTCTGGCAACAAGCGCAAGGTTGCTGCCACTGCTGCCCACGAG GCTTACAAGATTGGAGGCGAGCTTTCCGTCGATGAGCGTAACCTTCTCTC CGTTGCTTACAAGAACGTGGTCGGTACCCGCCGTGCCTCGTGGCGTATTA TCTCCTCCATTGAGCAGAAGGAGGAGTCCAAGGGCTCTGAGCAGCACGTT TCGATCATCCGTGACTACCGCCAGAAGATCGAGACCGAGCTCGAGAAGGT CTGCCAGGATGTCCTCGATGTTCTCGATGAGTCCCTCATCCCCAAGGCCG AGACTGGCGAGTCCAAGGTCTTCTACTACAAGATGAAGTCGCCAACAGAT GGTCACGTACATGAAGCAAGACGTTCCTCGCCCGGCTCTGTGAGCAGGCT GAGCGCTACGATGCGTGAGAAATGACTTCTGAGAATGCTACCGATGTCGC CCAGACCGATCTTACTCCTACCCACCCCATCCGCCTTGGTCTCGCCCTGA ACTTCTCCGTCTTCTACTACGAGATCCTGAACTCCCCCGATCGTGCCTGC CACCTTGCCAAGCAGGCGTTCGATGACGCCATTGCGGAGCTCGACTCGCT TTCGGAGGAGAGCTACCGTGATAGCACCCTGATCATGCAGCTCCTGCGTG ACAACCTTACTCTGTGGACCTCTTCTGATGGCAACGAGCCCGAGGGCGCT GCCCCCAAGGAGGACAAGCCCGAGGAGGAGACCGCCGCCGCCCCCGAGGA CAAGGCTGAGGAGCCCAAGCCTGCTGCCCCTGAGTCCTAGGAAGGGTGAC TACCACCGCTACCTCGCTGAGTTTGCCTCTGGCAACAAGCGCAAGGTTGC TGCCACTGCTGCCCACGAGGCTTACAAGATTGGAGGCGAGCTTTCCGTCG ATGAGCGTAACCTTCTCTCCGTTGCTTACAAGAACGTGGTCGGTACCCGC CGTGCCTCGTGGCGTATTATCTCCTCCATTGAGCAGAAGGAGGAGTCCAA GGGCTCTGAGCAGCACGTTTCGATCATCCGTGACTACCGCCAGAAGATCG AGACCGAGCTCGAGAAGGTCTGCCAGGATGTCCTCGATGTTCTCGATGAG TCCCTCATCCCCAAGGCCGAGACTGGCGAGTCCAAGGTCTTCTACTACAA GATGAAGTCGCCAACAGATGGTCACGTACATGAAGCAAGACGTTCCTCGC CCGGCTCTGTGAGCAGGCTGAGCGCTACGATGCGTGAGAAATGACTTCTG AG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011741-T1.utr3p1 | KJC3_011741-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011741-T1.utr5p1 | KJC3_011741-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR023409 |
DBxref | InterPro:IPR036815 |
DBxref | InterPro:IPR023410 |
DBxref | InterPro:IPR000308 |
DBxref | PFAM:PF00244 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:1478480..1480700 - |
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