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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1504236..1505394- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011749-T1 ID=KJC3_011749-T1|Name=KJC3_011749-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1159bp|location=Sequence derived from alignment at ch8:1504236..1505394- (Aspergillus niger KJC3)
TGAAGTTATCTAAACTAGTCTCGAGTCATTCGTTTACGAACCCCTCTTTC
TCACCCTCTTCCCCCCCCTCCTCCTCCTCCCTCACCTTCGCAGCTCGTAT
TCCTCATCCTCCTATTCCTGTCCCCAATAAATATAGCTAGTAGCCTCACG
GGCTCCAGTTGTATACCTACATTTGATTACTACCTCCACCACAACATAAA
CAAACAGATAACCCACACGAACCACCACCACCACCGCAACCATGTTCTGG
TTCTCATCCCACCAACAACAACAGCAACAACAGACTCCTCTCCTCCCACC
CCTACCCACTTCGAAATCCAAAATCCGTAGAACCCTCAAAGCCCCCGGCC
GTCCCATCGCCATCCGCAAAGACCAAATCACCGACACCAAAACCCTTCTA
ATCGTGCGTCCCCAAGGCGACGCCCAATCCGCCGTGGCATACAAAATCCA
AGATGCCGACGGCATAACGCTCTACACCGCTACGGGGCGCAAATTCAGCG
ACCGACCCTGTCGCGAGTTTCGTGATGCCTCGGGACTTCCGCTCTTTGAA
CTACACCGCAAGACCTCTTTCAAGAACAACTGGTCCGTCACCTTACCCGG
CAGCAACCCAGCCAGTCCGATAGCCAAAGGTGCTCTGCAGCGCTCATCCT
TCAGCGCCGCTGGCTGGGGGAACTGCAACTTCACCATCACATTCGACAAT
GTAGCTGCGGCGGACGGGAAGCAGCCTGAGGAGCGTACCCTGACGTTGGA
GGTACAACGGCATGGGAATGTGTTGGCGCTGTTTGATATCGTGGATGGGG
ATCGCAAGATCGCTGAGGTGAAGGAGAGTATTCGCCATAATGAGAAGTTG
GCGCTTATGCCTGCGTCTCGGCTTGGGTATCGCCCTGTTCTGGATGTCAT
TGTTACTCCCGGGGTAGATATGGCTTTGGTGAGTTTTCATCTTATTCTTT
TCACGGAGTATATTTACTGCATACAATATATCATACTTTCTACAGGATTA
TGTCTAACCATCTCGCGGTTCTTTAGATTGCAACGATTGCGGTCATCGCA
TCAGACACAGTGTTTGCTTCGAATTATTGATTGCGCGCGTTATTGAATTG
TAGATATGTCGGAACGCCATTATGGTAACCATGAGATTATGAACATGATG
ACTCTCTTT back to topCoding sequence (CDS) from alignment at ch8:1504236..1505394- >KJC3_011749-T1 ID=KJC3_011749-T1|Name=KJC3_011749-T1|organism=Aspergillus niger KJC3|type=CDS|length=1482bp|location=Sequence derived from alignment at ch8:1504236..1505394- (Aspergillus niger KJC3)
ATTGCAACGATTGCGGTCATCGCATCAGACACAGTGTTTGCTTCGAATTA
TTGAATGTTCTGGTTCTCATCCCACCAACAACAACAGCAACAACAGACTC
CTCTCCTCCCACCCCTACCCACTTCGAAATCCAAAATCCGTAGAACCCTC
AAAGCCCCCGGCCGTCCCATCGCCATCCGCAAAGACCAAATCACCGACAC
CAAAACCCTTCTAATCGTGCGTCCCCAAGGCGACGCCCAATCCGCCGTGG
CATACAAAATCCAAGATGCCGACGGCATAACGCTCTACACCGCTACGGGG
CGCAAATTCAGCGACCGACCCTGTCGCGAGTTTCGTGATGCCTCGGGACT
TCCGCTCTTTGAACTACACCGCAAGACCTCTTTCAAGAACAACTGGTCCG
TCACCTTACCCGGCAGCAACCCAGCCAGTCCGATAGCCAAAGGTGCTCTG
CAGCGCTCATCCTTCAGCGCCGCTGGCTGGGGGAACTGCAACTTCACCAT
CACATTCGACAATGTAGCTGCGGCGGACGGGAAGCAGCCTGAGGAGCGTA
CCCTGACGTTGGAGGTACAACGGCATGGGAATGTGTTGGCGCTGTTTGAT
ATCGTGGATGGGGATCGCAAGATCGCTGAGGTGAAGGAGAGTATTCGCCA
TAATGAGAAGTTGGCGCTTATGCCTGCGTCTCGGCTTGGGTATCGCCCTG
TTCTGGATGTCATTGTTACTCCCGGGGTAGATATGGCTTTGATTGCAACG
ATTGCGGTCATCGCATCAGACACAGTGTTTGCTTCGAATTATTGAATGTT
CTGGTTCTCATCCCACCAACAACAACAGCAACAACAGACTCCTCTCCTCC
CACCCCTACCCACTTCGAAATCCAAAATCCGTAGAACCCTCAAAGCCCCC
GGCCGTCCCATCGCCATCCGCAAAGACCAAATCACCGACACCAAAACCCT
TCTAATCGTGCGTCCCCAAGGCGACGCCCAATCCGCCGTGGCATACAAAA
TCCAAGATGCCGACGGCATAACGCTCTACACCGCTACGGGGCGCAAATTC
AGCGACCGACCCTGTCGCGAGTTTCGTGATGCCTCGGGACTTCCGCTCTT
TGAACTACACCGCAAGACCTCTTTCAAGAACAACTGGTCCGTCACCTTAC
CCGGCAGCAACCCAGCCAGTCCGATAGCCAAAGGTGCTCTGCAGCGCTCA
TCCTTCAGCGCCGCTGGCTGGGGGAACTGCAACTTCACCATCACATTCGA
CAATGTAGCTGCGGCGGACGGGAAGCAGCCTGAGGAGCGTACCCTGACGT
TGGAGGTACAACGGCATGGGAATGTGTTGGCGCTGTTTGATATCGTGGAT
GGGGATCGCAAGATCGCTGAGGTGAAGGAGAGTATTCGCCATAATGAGAA
GTTGGCGCTTATGCCTGCGTCTCGGCTTGGGTATCGCCCTGTTCTGGATG
TCATTGTTACTCCCGGGGTAGATATGGCTTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011749-T1.utr3p1 | KJC3_011749-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011749-T1.utr5p1 | KJC3_011749-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025659 |
| DBxref | InterPro:IPR007612 |
| DBxref | InterPro:IPR038595 |
| DBxref | PFAM:PF04525 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1504236..1505394 - |
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