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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1520313..1521414+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011757-T1 ID=KJC3_011757-T1|Name=KJC3_011757-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1102bp|location=Sequence derived from alignment at ch8:1520313..1521414+ (Aspergillus niger KJC3)
ATGACCTCTCAGGAAGAGTGGACACGAAAAAAGCTACACTTATCTGGCCC
TTAACCATCTGACTCTGAAGCACAACACGTCTGTTATCATAGAGGCCCTT
AAACATGCCTAGTAAGTGCACACAAACGTGCTTTATGGTTCTAACGGATG
AACTGACTGTGGATAGAACAACGCGATTATTGTACGGGATGCCAACGTCT
AGATACTGTATAGAAAGTGCTGTAACTAACGAAGGCTGAATATAGACAAG
ATACTGGGAGTGTCTCCCAAAGCAACACAACAAGAAATTCGCAATGCATA
CAAAAGGTGAGTCAGTATTCATCAAGGTGCAACTATGCTCAGTTCTGAAC
CGTGCAGGGAATCCCTGAAGTCTCATCCAGACAGAGTTCCTGTCGATTCA
CCAGAGAGGGCGGCTCGGACACGCAAGTTCCAGGAGATTAGCGATGCTTA
TTACACGTTGTCAGATGTATCACGCCGACGGGAGTATGATGCGATGAGGA
TGGCAGGCGGTGTCGAGGAGGAAGAGGAGGAAGTACCCCGTGGAGGTGCA
GGAGGATTCCCCTGGTCTGCTTTTGGCTTTGGCACGGCCGATAGTGAGCA
ACGCGCATCCGAGCAATTCGGGTCGGTGTTTGAAGAAATGCTGCGTGAAG
AGGGCCTAGCCAGCGAAGGCACAGATGCTGACGGTCAGACTCGTTCACAC
CCGACGTCTCGGTTCTGGTCCGTTATAGGTGGAATTAGTGGTGGTGCTCT
CGGTTTTATCGTAGCCAATGCTCCTGGAGCATTGGCTGGCGCAGTTGCTG
GCAATCGTCTTGGTGCAGTGCGAGATGCCAAAGGAAAGAGTGTTTACGAT
GTCTTCCTCCAGCTTCCTCAGACCGATCGTGCACGGCTTTTGAGTGAATT
AGCAGCCAAGGTTTTTCAGACGACTATGGGCCGCTGAACTTTCATTCGAT
GATAAGGAGTTCGAGTTAGTCTGGCGTTGTTATCTGCCTCATATAATAGA
GGTTTATTGGTCTGTAGCTAGTCTTATGAATGGGATATGTATACACTCTG
GATATTTTGTACGCTTGGGATCAGAGATACAATCGACTACAGATGAAAGA
GG back to topCoding sequence (CDS) from alignment at ch8:1520313..1521414+ >KJC3_011757-T1 ID=KJC3_011757-T1|Name=KJC3_011757-T1|organism=Aspergillus niger KJC3|type=CDS|length=2652bp|location=Sequence derived from alignment at ch8:1520313..1521414+ (Aspergillus niger KJC3)
ATGCCTAAACAACGCGATTATTACAAGATACTGGGAGTGTCTCCCAAAGC
AACACAACAAGAAATTCGCAATGCATACAAAAGGGAATCCCTGAAGTCTC
ATCCAGACAGAGTTCCTGTCGATTCACCAGAGAGGGCGGCTCGGACACGC
AAGTTCCAGGAGATTAGCGATGCTTATTACACGTTGTCAGATGTATCACG
CCGACGGGAGTATGATGCGATGAGGATGGCAGGCGGTGTCGAGGAGGAAG
AGGAGGAAGTACCCCGTGGAGGTGCAGGAGGATTCCCCTGGTCTGCTTTT
GGCTTTGGCACGGCCGATAGTGAGCAACGCGCATCCGAGCAATTCGGGTC
GGTGTTTGAAGAAATGCTGCGTGAAGAGGGCCTAGCCAGCGAAGGCACAG
ATGCTGACGGTCAGACTCGTTCACACCCGACGTCTCGGTTCTGGTCCGTT
ATAGGTGGAATTAGTGGTGGTGCTCTCGGTTTTATCGTAGCCAATGCTCC
TGGAGCATTGGCTGGCGCAGTTGCTGGCAATCGTCTTGGTGCAGTGCGAG
ATGCCAAAGGAAAGAGTGTTTACGATGTCTTCCTCCAGCTTCCTCAGACC
GATCGTGCACGGCTTTTGAGTGAATTAGCAGCCAAGGTTTTTCAGACGAC
TATGGGCCGCTGAATGCCTAAACAACGCGATTATTACAAGATACTGGGAG
TGTCTCCCAAAGCAACACAACAAGAAATTCGCAATGCATACAAAAGGGAA
TCCCTGAAGTCTCATCCAGACAGAGTTCCTGTCGATTCACCAGAGAGGGC
GGCTCGGACACGCAAGTTCCAGGAGATTAGCGATGCTTATTACACGTTGT
CAGATGTATCACGCCGACGGGAGTATGATGCGATGAGGATGGCAGGCGGT
GTCGAGGAGGAAGAGGAGGAAGTACCCCGTGGAGGTGCAGGAGGATTCCC
CTGGTCTGCTTTTGGCTTTGGCACGGCCGATAGTGAGCAACGCGCATCCG
AGCAATTCGGGTCGGTGTTTGAAGAAATGCTGCGTGAAGAGGGCCTAGCC
AGCGAAGGCACAGATGCTGACGGTCAGACTCGTTCACACCCGACGTCTCG
GTTCTGGTCCGTTATAGGTGGAATTAGTGGTGGTGCTCTCGGTTTTATCG
TAGCCAATGCTCCTGGAGCATTGGCTGGCGCAGTTGCTGGCAATCGTCTT
GGTGCAGTGCGAGATGCCAAAGGAAAGAGTGTTTACGATGTCTTCCTCCA
GCTTCCTCAGACCGATCGTGCACGGCTTTTGAGTGAATTAGCAGCCAAGG
TTTTTCAGACGACTATGGGCCGCTGAATGCCTAAACAACGCGATTATTAC
AAGATACTGGGAGTGTCTCCCAAAGCAACACAACAAGAAATTCGCAATGC
ATACAAAAGGGAATCCCTGAAGTCTCATCCAGACAGAGTTCCTGTCGATT
CACCAGAGAGGGCGGCTCGGACACGCAAGTTCCAGGAGATTAGCGATGCT
TATTACACGTTGTCAGATGTATCACGCCGACGGGAGTATGATGCGATGAG
GATGGCAGGCGGTGTCGAGGAGGAAGAGGAGGAAGTACCCCGTGGAGGTG
CAGGAGGATTCCCCTGGTCTGCTTTTGGCTTTGGCACGGCCGATAGTGAG
CAACGCGCATCCGAGCAATTCGGGTCGGTGTTTGAAGAAATGCTGCGTGA
AGAGGGCCTAGCCAGCGAAGGCACAGATGCTGACGGTCAGACTCGTTCAC
ACCCGACGTCTCGGTTCTGGTCCGTTATAGGTGGAATTAGTGGTGGTGCT
CTCGGTTTTATCGTAGCCAATGCTCCTGGAGCATTGGCTGGCGCAGTTGC
TGGCAATCGTCTTGGTGCAGTGCGAGATGCCAAAGGAAAGAGTGTTTACG
ATGTCTTCCTCCAGCTTCCTCAGACCGATCGTGCACGGCTTTTGAGTGAA
TTAGCAGCCAAGGTTTTTCAGACGACTATGGGCCGCTGAATGCCTAAACA
ACGCGATTATTACAAGATACTGGGAGTGTCTCCCAAAGCAACACAACAAG
AAATTCGCAATGCATACAAAAGGGAATCCCTGAAGTCTCATCCAGACAGA
GTTCCTGTCGATTCACCAGAGAGGGCGGCTCGGACACGCAAGTTCCAGGA
GATTAGCGATGCTTATTACACGTTGTCAGATGTATCACGCCGACGGGAGT
ATGATGCGATGAGGATGGCAGGCGGTGTCGAGGAGGAAGAGGAGGAAGTA
CCCCGTGGAGGTGCAGGAGGATTCCCCTGGTCTGCTTTTGGCTTTGGCAC
GGCCGATAGTGAGCAACGCGCATCCGAGCAATTCGGGTCGGTGTTTGAAG
AAATGCTGCGTGAAGAGGGCCTAGCCAGCGAAGGCACAGATGCTGACGGT
CAGACTCGTTCACACCCGACGTCTCGGTTCTGGTCCGTTATAGGTGGAAT
TAGTGGTGGTGCTCTCGGTTTTATCGTAGCCAATGCTCCTGGAGCATTGG
CTGGCGCAGTTGCTGGCAATCGTCTTGGTGCAGTGCGAGATGCCAAAGGA
AAGAGTGTTTACGATGTCTTCCTCCAGCTTCCTCAGACCGATCGTGCACG
GCTTTTGAGTGAATTAGCAGCCAAGGTTTTTCAGACGACTATGGGCCGCT
GA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011757-T1.utr5p1 | KJC3_011757-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011757-T1.utr3p1 | KJC3_011757-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036869 |
| DBxref | InterPro:IPR001623 |
| DBxref | PFAM:PF00226 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1520313..1521414 + |
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