|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1546154..1547723- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011764-T1 ID=KJC3_011764-T1|Name=KJC3_011764-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1570bp|location=Sequence derived from alignment at ch8:1546154..1547723- (Aspergillus niger KJC3)
CAAGTCTCCTTCCACTCTCCCAAGTTTCGACCACGATTCTCTCAGCTGCT
GCACCGCAGCAGATACTACCAAAGACGATGAAGAAGCACTCAGCGCTATG
ATAGCTTTCAATGTGTTATTCAATCCCTACTCCCTAATCCTCACATACTT
CTCCTTACTCTTGCCGGTTCGCGGATTCGTTCGCTCTGAAACGGACCGCA
TACCTTCAGGCCAGGACTTACGCCCTATCCCTGAGGAGATTTACAACTCT
CTGGATGAGCTAGCGCGTGTGGTCGATGTCGCCTACTGCGTTGGCAGCAC
TGGGCTTCAGAAGCCCTTTCAGTGCCTGAGCCACTGCAGTGACCTCAAGG
GGTTTGAGCTAATAACTGTAGGTCGTCCTGCCGTGAGCAGGAGACTCCAA
ATGATTAACCCATTTGCTAGACATGGAATACTGGGCCGTTTCTATCGGAC
TCTTGTGGATACATAGCAGTTTCGCATTCGCCGTCACCTAACCGTATCAT
CGTCGCTTTCCGTGGTACCTACTCGATTACCAACACGATTGTTGATTTAT
CTGCCTATCCACAAGCCTATGTGCCGTACAACACCGGACATAAGAATGGC
AAAAAAGAACCAAGCTGTTACAATTGCACTGTCCACGCCGGTTTCTTCAC
TTCGTGGCAGAACACGCGCTCGACGATACTCGACCACGTCGCAGCCGCAA
GGGAGCAATATCCCGACTATAAGTTGGTTCTAGTTGGCCACTCACTTGGT
GGGGCGGTTGCTGCGCTGGCTGGTATTGAGATGCAGCTGCGAGGTTGGGA
ACCTACGGTGACGACATTTGGAGAACCGAAGGTTGGAAACAGGGCCTTTG
CCGATTTCCTGGGTAAGATATTCAGGTTGGACGAGAACTCCGCATGGCGG
TTTCGCAGGGTCACGCATGTTTATGATCCTGTGCCCCTCCTGCCACTGGA
GGAATGGGGATATGCGATGCACGCGGGGGAAATCTTTATCTCCAAGGAAG
ATCTTCCGCCATCTGTAGATGACGTTCACTTCTGCGAGGGCCCTCGCGAT
GCACGATGCATATCAGGGGAAGGAGGGGAAATGGCCTTGGCGGTCGCTCT
TCATGAAAGGGCGTCTCTGGCTGCAGATGCGAAGTCGCAGGCTGGCTGGG
CTGACGCTGAATCTACCGAGCAGCACAACATGCCAGACGGACATATATCT
CAAACACCCTTGCACGTGCAGAAAGGTGCCATGAAGCACCGGGGCTTATT
TGATCTACCAAGACGACTTATCCCGTCTAGGTACCACCTATGGGAACTCT
TGTTCTCCCATCGGGACTACTTTTGGCGAGTTGGGCTCTGTGTCCCTGGT
CGTGACCGGGCAGGCAAGGGGTGGTGGACGTCGGATTCGTAGTCCCGATA
TTCTTCTTATCTACAAAGGGATGACCCAAGTCATACATGGCTGTAGGAGC
GAGTGCACGTATGAAAGACTGGTCTTCTTGATACATTTGATTCATATTCC
TACTTCTAATCGAGTCACGTATGCAACAATACAGCTAGCTAAATATCCAC
GAAATCATGAGTCCCTTAGA back to topCoding sequence (CDS) from alignment at ch8:1546154..1547723- >KJC3_011764-T1 ID=KJC3_011764-T1|Name=KJC3_011764-T1|organism=Aspergillus niger KJC3|type=CDS|length=2484bp|location=Sequence derived from alignment at ch8:1546154..1547723- (Aspergillus niger KJC3)
ACATGGAATACTGGGCCGTTTCTATCGGACTCTTGTGGATACATAGCAGT
TTCGCATTCGCCGTCACCTAACCGTATCATCGTCGCTTTCCGTGGTACCT
ACTCGATTACCAACACGATTGTTGATTTATCTGCCTATCCACAAGCCTAT
GTGCCGTACAACACCGGACATAAGAATGGCAAAAAAGAACCAAGCTGTTA
CAATTGCACTGTCCACGCCGGTTTCTTCACTTCGTGGCAGAACACGCGCT
CGACGATACTCGACCACGTCGCAGCCGCAAGGGAGCAATATCCCGACTAT
AAGTTGGTTCTAGTTGGCCACTCACTTGGTGGGGCGGTTGCTGCGCTGGC
TGGTATTGAGATGCAGCTGCGAGGTTGGGAACCTACGGTGACGACATTTG
GAGAACCGAAGGTTGGAAACAGGGCCTTTGCCGATTTCCTGGGTAAGATA
TTCAGGTTGGACGAGAACTCCGCATGGCGGTTTCGCAGGGTCACGCATGT
TTATGATCCTGTGCCCCTCCTGCCACTGGAGGAATGGGGATATGCGATGC
ACGCGGGGGAAATCTTTATCTCCAAGGAAGATCTTCCGCCATCTGTAGAT
GACGTTCACTTCTGCGAGGGCCCTCGCGATGCACGATGCATATCAGGGGA
AGGAGGGGAAATGGCCTTGGCGGTCGCTCTTCATGAAAGGGCGTCTCTGG
CTGCAGATGCGAAGTCGCAGGCTGGCTGGGCTGACGCTGAATCTACCGAG
CAGCACAACATGCCAGACGGACATATATCTCAAACACCCTTGCACGTGCA
GAAAGGTGCCATGAAGCACCGGGGCTTATTTGATCTACCAAGACGACTTA
TCCCGTCTAGGTACCACCTATGGGAACTCTTGTTCTCCCATCGGGACTAC
TTTTGGCGAGTTGGGCTCTGTGTCCCTGGTCGTGACCGGGCAGGCAAGGG
GTGGTGGACGTCGGATTCGTAGATGATAGCTTTCAATGTGTTATTCAATC
CCTACTCCCTAATCCTCACATACTTCTCCTTACTCTTGCCGGTTCGCGGA
TTCGTTCGCTCTGAAACGGACCGCATACCTTCAGGCCAGGACTTACGCCC
TATCCCTGAGGAGATTTACAACTCTCTGGATGAGCTAGCGCGTGTGGTCG
ATGTCGCCTACTGCGTTGGCAGCACTGGGCTTCAGAAGCCCTTTCAGTGC
CTGAGCCACTGCAGTGACCTCAAGGGGTTTGAGCTAATAACTACATGGAA
TACTGGGCCGTTTCTATCGGACTCTTGTGGATACATAGCAGTTTCGCATT
CGCCGTCACCTAACCGTATCATCGTCGCTTTCCGTGGTACCTACTCGATT
ACCAACACGATTGTTGATTTATCTGCCTATCCACAAGCCTATGTGCCGTA
CAACACCGGACATAAGAATGGCAAAAAAGAACCAAGCTGTTACAATTGCA
CTGTCCACGCCGGTTTCTTCACTTCGTGGCAGAACACGCGCTCGACGATA
CTCGACCACGTCGCAGCCGCAAGGGAGCAATATCCCGACTATAAGTTGGT
TCTAGTTGGCCACTCACTTGGTGGGGCGGTTGCTGCGCTGGCTGGTATTG
AGATGCAGCTGCGAGGTTGGGAACCTACGGTGACGACATTTGGAGAACCG
AAGGTTGGAAACAGGGCCTTTGCCGATTTCCTGGGTAAGATATTCAGGTT
GGACGAGAACTCCGCATGGCGGTTTCGCAGGGTCACGCATGTTTATGATC
CTGTGCCCCTCCTGCCACTGGAGGAATGGGGATATGCGATGCACGCGGGG
GAAATCTTTATCTCCAAGGAAGATCTTCCGCCATCTGTAGATGACGTTCA
CTTCTGCGAGGGCCCTCGCGATGCACGATGCATATCAGGGGAAGGAGGGG
AAATGGCCTTGGCGGTCGCTCTTCATGAAAGGGCGTCTCTGGCTGCAGAT
GCGAAGTCGCAGGCTGGCTGGGCTGACGCTGAATCTACCGAGCAGCACAA
CATGCCAGACGGACATATATCTCAAACACCCTTGCACGTGCAGAAAGGTG
CCATGAAGCACCGGGGCTTATTTGATCTACCAAGACGACTTATCCCGTCT
AGGTACCACCTATGGGAACTCTTGTTCTCCCATCGGGACTACTTTTGGCG
AGTTGGGCTCTGTGTCCCTGGTCGTGACCGGGCAGGCAAGGGGTGGTGGA
CGTCGGATTCGTAGATGATAGCTTTCAATGTGTTATTCAATCCCTACTCC
CTAATCCTCACATACTTCTCCTTACTCTTGCCGGTTCGCGGATTCGTTCG
CTCTGAAACGGACCGCATACCTTCAGGCCAGGACTTACGCCCTATCCCTG
AGGAGATTTACAACTCTCTGGATGAGCTAGCGCGTGTGGTCGATGTCGCC
TACTGCGTTGGCAGCACTGGGCTTCAGAAGCCCTTTCAGTGCCTGAGCCA
CTGCAGTGACCTCAAGGGGTTTGAGCTAATAACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011764-T1.utr3p1 | KJC3_011764-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011764-T1.utr5p1 | KJC3_011764-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR002921 |
| DBxref | PFAM:PF01764 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1546154..1547723 - |
|
