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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1553190..1557552+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011768-T1 ID=KJC3_011768-T1|Name=KJC3_011768-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4363bp|location=Sequence derived from alignment at ch8:1553190..1557552+ (Aspergillus niger KJC3)
GCCTATGTGTAATAATAAATCAACAAAAGTAGCCGACTAAGTCAACCAAG
CAAAATTACTGATTTTACTACGGATACCCCTCCCTCATCATGCATTCACT
CGTTTCCCTCTTTTGCCTTCTTTTTAGTGTTAGGTACTTAGGTATGATTT
TTATTTTATTTATCTAATATTATTTTTTTCTTGGGTGCTTCTAGCGGGCA
TCGCCGGTGCAATTCTTGCTTTGACTTGTCCGCTTTCAGGGATGGCGTTG
TGTCCGAAAGTCTGAATTCTGAAAGGACCACGCCAGTCCAAGGCTGACCT
TGACCGTCCATTCCCATGGCTCCATCCACATCCCTCTCCAATTCCTATTG
TCAAAGAGGGCACGAAAAAGGTACCTTGGCTGGCTGGTGAATAATATCCG
GGTGTGTTTGCTCTTTCTTAGCTCCATTTACTCTGACACCCTTACCCACA
TCCACATCCACACGCGGTCTCTCGCTCTTACACAATGATCTTGTCAGTAG
CTGGTTCCCTTCCCCGACCGTCTGCAACCTGCCGATCCATCTTCTCGTTC
CCAATTCCGTTGTCCGTGAGAGCTACAGTTGCCTGTGGATAACGCATTCG
TCACTGTGGTGTCTTTCGTGCATCCTCAACCATGGCAGCCCAGTCCATCT
CCACTCCACTTATGTATCTGATTTCCCTTACTTACCCCAGCTACGATTCT
TAATCTATCTTTCTTTTCCATCCGCTTCATCCCGTTCAACCCCGTGTTTT
TGATTTTAATTCTTAATTTGAATCTGAATTTTTTTTTCTTTTATTCCTTT
TTCCCCATCTTTACCTGGCCGACCAGGGATTGCGGTAATCTGATAATATT
CTTTTTCCCCTTCTTGTACCTCCTTTGTTCTACTATTGCATAATACATCC
TCACCACTCCTGGTTTCGTCGTCTCCCACCCTCCACTACTACTCTTTCAG
TGCCTCTCCTCCTGACATCTCCATTCTGTCTGCCTATCTACAGTATAAAG
CAAATCAGGAGGGAGAAAACCCGCTAGTTGGACGTGGCTGATTCCGCCCG
TGCTGTATTTCTTTTTCATTACAACAGTTCATTGTCCTGTCTTTTTGTTT
TAAGTAGCGCGTCATTCTCGCTGCCTATATAGCTGGTCGTCTTTGCTTTT
TTGCCCCATCATCTAACTACGCTCTTCTGGTTCTTACCAGCTTGAGCGTC
GCAAGTCAGCGCCTCGGGCGAAAGCTCGAACCAGTCCCGTCCAGAATCCT
CCTTTTGTTTCCCCTGCGTGTTCTACTAAGTCTTTCAATCGACCTGGGGT
TGACGTCGTCGAAACTTTTCGAAACGTCCACTCGGCCTCTCTACCTCATA
GGCAGGAGCCTGGTGCTTTCAGCCTCGTTGGTACCCAAGTTTCTTCTGCA
GGAGATTGACCACTGTTATGGCATTACCGGCTTAAGCCCTGAAGTGATTT
TGTTTACCAGCCACTGGACGCCATTTGTTGAATTGTCTGACATTGCGGCC
TGCCCATGTCTGCCTCGCACCTTTAGGTGAGAGGATCAGGTTCTTCTGAA
GCCTTCACTTCAGTTTTCACTCAAGAAGGAAGCCATGGGAGGCTTCCTTT
CAGTACAGAGCAAAGAAAAGCGTCGCCGCACCAATCGGCTGTCAAAACCG
CCTCCGAATAGGGCAACGCTAGCTTCAAACAGCTTCCGCGCATCTCGTCA
GACTTCCGGCACCAGCTCTCCTACAGAATGCCCGGCTTGTACTGCTTGGC
AAGACCCTTGGACCGGAACTTCCATCTCTCTCAAGGCCCCTGAGCCTGAT
GTATGCACGAGGAGGTCGCAGTCTCTTCCATCTGCCTCCTACCGGCCTGG
GGAGCCATGGCCCACTCTAAGCAGGGCCCGAAAATGCCAGTCTATGGTCA
AAGAGCCAGATGATTTTAGTCTGTACTCGCACGTTCCTACCGTCCCCACG
TCAGACTCCATTATGGGGGGTCAAGTCTCTCGCCGTTCTTCCAGACACAA
TAGCTTTCAGGCAACAACTCTCCCAAGTCGACCACAGCCATTGATGGCAC
GGCCACCGCGACCAAGACGGGCGTACTCTGCGCATACACCACCTCAGAGA
GCGCAGAGTACTATGCATCATAGTACAATCGAAGAGGCAACGTCTTCTAA
CACGCTATTTAGGGTCGACAGCCAGGGATTTTCTATCATCCGTCGACGAT
CGCTGCTAACACGGCCTGGGATCGCAACAAGAAGGCCAGCAAGAGATACA
GCCCGAAGATTGTCTTCACCAGTTGTACGCGAACCCACGCCGTCACTCAA
CTATCTGAACGAAACATCTGCATCTCCAAGGCTGTTACCATCCGGTTACG
AAGATGATGCTTGTGGGTTATCTAGTCCGGTTACACGATTTCGTCCAGCA
ACTCCCAATGAGTTCGAATATACCCATTTAGGGGCTCTCAAATTAGGATC
ATTGCGTGTGGTAAATGGTTCCGCATCGCCATGCCCCAGCGACAGGACTC
GATTGAACCGTCCCAACAGCCCAGATCCCGAACCAAGCAGCATCAACACG
CATGACACGAAGTCGGAACAGCCCCAGCACTCTTCCCACAAGGTGCCATG
TTATATGGATCAGAAAGCGCAGTTGGCTTCTGAAAGTGCAGACGAGCAAT
CCCATAATGCTGAGATTGTACGGGACAGCGGACATGAAGTGGATCTAACC
AGCTTCGATCTATCGAACATACAGGACTATGCTTCGGAGAGTGCAATCGA
GCAATCCCGTAAAGCTGAGATCGTCCGGGACAGCGCACTTGATAAAGTCG
ATCTAACCAGCTTTGATCTATCAAACATCCAAGACTATGCTCCCGTTCCA
TGTAACGATACGGCCCGTGCTCCAAAGTTACAGATTCCACCTAATGGAGT
GGGAAATCCCGACGATCATCCTGCAAGCCCATTTTCCTTCGAGAGATCTC
CAGCAACCTCAACTCCGTACAGACTTCAAGGTAGCGAAACAGAAGATGAA
GGTGTTTCTATCGCTGATGAAGGAAAATGGTTTGTCCACCAGCTTGAACG
TTCCTTCCGAGAACACGGGCATCGAGAACTCCAACATGCGCAGGGAACGG
TTGACAGCGGCTACAGTTCCGCAGCCTCCGTCCGTTCCACTAGACGATCG
ACTGATTCTCGCACATCTACACATCAACCTGGAGTGGCCCGCAGATCTAC
ATTCAACGGTAATTCAAAGGACCACGGGTTTTTGGATGCCGGAAACAGCC
CAGAACTTGGCTTTGAGCCCTCTGTACACCGTCATTCAAGCCTTCAGGGT
CCTTGGGCAAGGCCCAAAGTCGACAGCTATGGCTGGCCGTCCCACAGATG
GTCAATGTGTCATGACTTCCGACCGATGCCCCCTAAACCGCGCCTAAGGA
GCAGTTCATTCGCGACTCCTCCAGAATACCGGCATACAATGCCCTACTCT
CAATATTGCCACCAATTGAGGAGCCTCGATACTGCTTCTCCTGGCCTGTC
AGTTGTCTCTGCAGGCGCTATACCTCACCAATCCCCCCAATGGGAGCACG
TCGGAGCATCCCTAGCTCCATCGGAGAAAAGCTGGAAACAGCCCATGACC
ACAGTGACGGAGCACGACGTGCAGGGTAGCAGCAGCACAATGAGCGCTGC
GTGGCTACCCATGCCAAATATTGATGCACTTCGCATGGCAGTCCCAGAAA
GCATGGAGGGCTTGGATACAGGGAGACTGGTATCTGGACAGTTGAGAGGA
AGAGCTAGGAGCCGGAGTATTGAAAGTCAGCGTAAGAGGCTGACGAGGCA
CGCTAAACATCCAGATCTTTACAAGGCCGCTTCACCAACTATCTTTCGTT
GATGCGGTGGCTTTTCCAGCCTCCTCTATTACTTGCGCGTCACCCTTTGC
CATCATCCTTTCACCCCCAAGTTATATCACCATTCCCTTCCGAAATTTTC
CTTTTGCAATTAGTCCTGTACGTCAGTGCCGGGATTCCCACTTTGAAGTC
TAACGGGCGGATATCTCATTTACGTCGCCAGCTTAGTCTTGGTTCTTCTC
TTCAGTCGTTTTCCCTGCTTTACAAATACCCATTTGGTAACCTGGATGAT
TGTTTGTGCTCCGTTTATATAGTACTATATCAGAGTTCGATTGGCGCGGG
AAAGTCTAGGAGTTTTCTTTTCTTGTCTTGTGTTTACTTTTTGACATTTG
AATTACTTATTATATTGGATCCTTCCCTCCGCTTGTACATATCTTGGAGT
GGACAAGGAGAAAAGCGAGGTATACTCATCAATCTATTCCCGCTTTGCGG
GCTTCATGTATCATGGTGAACAATTCATCAGCGCCAAGTAGAATTACATA
GCCGCGATAAGCT back to topCoding sequence (CDS) from alignment at ch8:1553190..1557552+ >KJC3_011768-T1 ID=KJC3_011768-T1|Name=KJC3_011768-T1|organism=Aspergillus niger KJC3|type=CDS|length=2268bp|location=Sequence derived from alignment at ch8:1553190..1557552+ (Aspergillus niger KJC3)
ATGGGAGGCTTCCTTTCAGTACAGAGCAAAGAAAAGCGTCGCCGCACCAA
TCGGCTGTCAAAACCGCCTCCGAATAGGGCAACGCTAGCTTCAAACAGCT
TCCGCGCATCTCGTCAGACTTCCGGCACCAGCTCTCCTACAGAATGCCCG
GCTTGTACTGCTTGGCAAGACCCTTGGACCGGAACTTCCATCTCTCTCAA
GGCCCCTGAGCCTGATGTATGCACGAGGAGGTCGCAGTCTCTTCCATCTG
CCTCCTACCGGCCTGGGGAGCCATGGCCCACTCTAAGCAGGGCCCGAAAA
TGCCAGTCTATGGTCAAAGAGCCAGATGATTTTAGTCTGTACTCGCACGT
TCCTACCGTCCCCACGTCAGACTCCATTATGGGGGGTCAAGTCTCTCGCC
GTTCTTCCAGACACAATAGCTTTCAGGCAACAACTCTCCCAAGTCGACCA
CAGCCATTGATGGCACGGCCACCGCGACCAAGACGGGCGTACTCTGCGCA
TACACCACCTCAGAGAGCGCAGAGTACTATGCATCATAGTACAATCGAAG
AGGCAACGTCTTCTAACACGCTATTTAGGGTCGACAGCCAGGGATTTTCT
ATCATCCGTCGACGATCGCTGCTAACACGGCCTGGGATCGCAACAAGAAG
GCCAGCAAGAGATACAGCCCGAAGATTGTCTTCACCAGTTGTACGCGAAC
CCACGCCGTCACTCAACTATCTGAACGAAACATCTGCATCTCCAAGGCTG
TTACCATCCGGTTACGAAGATGATGCTTGTGGGTTATCTAGTCCGGTTAC
ACGATTTCGTCCAGCAACTCCCAATGAGTTCGAATATACCCATTTAGGGG
CTCTCAAATTAGGATCATTGCGTGTGGTAAATGGTTCCGCATCGCCATGC
CCCAGCGACAGGACTCGATTGAACCGTCCCAACAGCCCAGATCCCGAACC
AAGCAGCATCAACACGCATGACACGAAGTCGGAACAGCCCCAGCACTCTT
CCCACAAGGTGCCATGTTATATGGATCAGAAAGCGCAGTTGGCTTCTGAA
AGTGCAGACGAGCAATCCCATAATGCTGAGATTGTACGGGACAGCGGACA
TGAAGTGGATCTAACCAGCTTCGATCTATCGAACATACAGGACTATGCTT
CGGAGAGTGCAATCGAGCAATCCCGTAAAGCTGAGATCGTCCGGGACAGC
GCACTTGATAAAGTCGATCTAACCAGCTTTGATCTATCAAACATCCAAGA
CTATGCTCCCGTTCCATGTAACGATACGGCCCGTGCTCCAAAGTTACAGA
TTCCACCTAATGGAGTGGGAAATCCCGACGATCATCCTGCAAGCCCATTT
TCCTTCGAGAGATCTCCAGCAACCTCAACTCCGTACAGACTTCAAGGTAG
CGAAACAGAAGATGAAGGTGTTTCTATCGCTGATGAAGGAAAATGGTTTG
TCCACCAGCTTGAACGTTCCTTCCGAGAACACGGGCATCGAGAACTCCAA
CATGCGCAGGGAACGGTTGACAGCGGCTACAGTTCCGCAGCCTCCGTCCG
TTCCACTAGACGATCGACTGATTCTCGCACATCTACACATCAACCTGGAG
TGGCCCGCAGATCTACATTCAACGGTAATTCAAAGGACCACGGGTTTTTG
GATGCCGGAAACAGCCCAGAACTTGGCTTTGAGCCCTCTGTACACCGTCA
TTCAAGCCTTCAGGGTCCTTGGGCAAGGCCCAAAGTCGACAGCTATGGCT
GGCCGTCCCACAGATGGTCAATGTGTCATGACTTCCGACCGATGCCCCCT
AAACCGCGCCTAAGGAGCAGTTCATTCGCGACTCCTCCAGAATACCGGCA
TACAATGCCCTACTCTCAATATTGCCACCAATTGAGGAGCCTCGATACTG
CTTCTCCTGGCCTGTCAGTTGTCTCTGCAGGCGCTATACCTCACCAATCC
CCCCAATGGGAGCACGTCGGAGCATCCCTAGCTCCATCGGAGAAAAGCTG
GAAACAGCCCATGACCACAGTGACGGAGCACGACGTGCAGGGTAGCAGCA
GCACAATGAGCGCTGCGTGGCTACCCATGCCAAATATTGATGCACTTCGC
ATGGCAGTCCCAGAAAGCATGGAGGGCTTGGATACAGGGAGACTGGTATC
TGGACAGTTGAGAGGAAGAGCTAGGAGCCGGAGTATTGAAAGTCAGCGTA
AGAGGCTGACGAGGCACGCTAAACATCCAGATCTTTACAAGGCCGCTTCA
CCAACTATCTTTCGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011768-T1.utr5p1 | KJC3_011768-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011768-T1.utr3p1 | KJC3_011768-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1553190..1557552 + |
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