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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1560706..1562061+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011771-T1 ID=KJC3_011771-T1|Name=KJC3_011771-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1356bp|location=Sequence derived from alignment at ch8:1560706..1562061+ (Aspergillus niger KJC3)
GCTATCGGGATAAGAAGTGCTGGTGGGAGCTTCATCATACCAGACTCACA
CTTGGCTTTGAAATACCGATCTATATCACATTCTATTTAGACTCCAGCTG
CTATTCATACTCCTAAGCTTCATTCCTTCTTTATATATACTTTGACCTAC
TACTACTACATACATCAGGTATTATCACTAGTATATACTACTACTAGCAC
TGCTGATCGATATGGCTACCTTCTCCGTGAGTCCACATCCCTTCATTGGC
CCACTCCTTCTTTCAAGAACTGATATCGTGTCTCATGGCACAGCGTCTGG
TTCGTTTCTTGGCCAAGGACGGCCAGACTTACTACGGAGACGCCCTATTG
TCAGCGGGCGTGAGCGACATTGCCCAAGCCACCAAGGCACGGGTCATCCA
GGGCGATATTTTCGGACAGCACCATGTCACAGACCAGATTGCCGATATTA
AAATGCTCCTGGCGCCATTGGCGAGAAAAGACATTGGGACCGTGCGTTGT
CTGGGACTCAATTATGAACAACACGCCAAAGAATCAAATCTACCCTTGCC
GAAATTCCCTGTTCTCTTCTACAAGCCCGTCACCTCTGTTACGGGACCTA
CAGATGACGTCCCGGTTTCCCGTATGGCTCAACTGGGCGAGGGTCTAGAC
TATGAGTGTGAATTGGTTGCCATCATCGGCAAGGAAGCTAAGAATGTGCC
TGAGAGTCAGGCCCTGGACTATGTTTTGGGTTATGCCGTTGGAAACGATG
TCTCTCATCGTGAATGGCAGTTGAAGCACGGCGGAGGACAATGGGGCCTG
GGCAAGGGCTTCGACGGATGGGCGCCCTTTGGACCAGGTATTGTATCTTC
GAAGCTAATCCGTGATCCCAACAACTTGCAGATCTCGACAAAACTGAACG
GCCAAACGGTTCAATCATCCTCCACCAAGGATATGATATTTAATGTGGCC
AAGACAGTGTCGTTCTTATCTCAGGGTACCACCTTGTTGCCCGGGGATGT
AATCTTTACAGGAACGTAAGTTAGCGCTTATCTGCCCATTCCGCACTTAC
CATGCACAAGGCTCACTTCTCCAGACCCCAAGGTGTTGGTATGGGTCGAA
AGCCTGCGCTCTGGCTCAAGGATGGCGATTTGGTTGAGGTTTCTCTTGAG
GGTGTCGGATCATGCCTGAATCGCGTTGTCTTCGACAAGCCCTCTTCTAA
GCTGTGAGCTAGTAGTGAAAGGAACAGGTGGCGCGGGGCTTATTGAGTGT
AACAAGGGCCGTCAAGTGTCCCTTGAACGTTGTAGGATCCCGACCACCCA
CCATCACAAGTACTAGTCTGTGCATTCATATACATATAGCGCCCTACAGC
CATGAC back to topCoding sequence (CDS) from alignment at ch8:1560706..1562061+ >KJC3_011771-T1 ID=KJC3_011771-T1|Name=KJC3_011771-T1|organism=Aspergillus niger KJC3|type=CDS|length=2610bp|location=Sequence derived from alignment at ch8:1560706..1562061+ (Aspergillus niger KJC3)
ATGGCTACCTTCTCCCGTCTGGTTCGTTTCTTGGCCAAGGACGGCCAGAC
TTACTACGGAGACGCCCTATTGTCAGCGGGCGTGAGCGACATTGCCCAAG
CCACCAAGGCACGGGTCATCCAGGGCGATATTTTCGGACAGCACCATGTC
ACAGACCAGATTGCCGATATTAAAATGCTCCTGGCGCCATTGGCGAGAAA
AGACATTGGGACCGTGCGTTGTCTGGGACTCAATTATGAACAACACGCCA
AAGAATCAAATCTACCCTTGCCGAAATTCCCTGTTCTCTTCTACAAGCCC
GTCACCTCTGTTACGGGACCTACAGATGACGTCCCGGTTTCCCGTATGGC
TCAACTGGGCGAGGGTCTAGACTATGAGTGTGAATTGGTTGCCATCATCG
GCAAGGAAGCTAAGAATGTGCCTGAGAGTCAGGCCCTGGACTATGTTTTG
GGTTATGCCGTTGGAAACGATGTCTCTCATCGTGAATGGCAGTTGAAGCA
CGGCGGAGGACAATGGGGCCTGGGCAAGGGCTTCGACGGATGGGCGCCCT
TTGGACCAGGTATTGTATCTTCGAAGCTAATCCGTGATCCCAACAACTTG
CAGATCTCGACAAAACTGAACGGCCAAACGGTTCAATCATCCTCCACCAA
GGATATGATATTTAATGTGGCCAAGACAGTGTCGTTCTTATCTCAGGGTA
CCACCTTGTTGCCCGGGGATGTAATCTTTACAGGAACACCCCAAGGTGTT
GGTATGGGTCGAAAGCCTGCGCTCTGGCTCAAGGATGGCGATTTGGTTGA
GGTTTCTCTTGAGGGTGTCGGATCATGCCTGAATCGCGTTGTCTTCGACA
AGCCCTCTTCTAAGCTGTGAATGGCTACCTTCTCCCGTCTGGTTCGTTTC
TTGGCCAAGGACGGCCAGACTTACTACGGAGACGCCCTATTGTCAGCGGG
CGTGAGCGACATTGCCCAAGCCACCAAGGCACGGGTCATCCAGGGCGATA
TTTTCGGACAGCACCATGTCACAGACCAGATTGCCGATATTAAAATGCTC
CTGGCGCCATTGGCGAGAAAAGACATTGGGACCGTGCGTTGTCTGGGACT
CAATTATGAACAACACGCCAAAGAATCAAATCTACCCTTGCCGAAATTCC
CTGTTCTCTTCTACAAGCCCGTCACCTCTGTTACGGGACCTACAGATGAC
GTCCCGGTTTCCCGTATGGCTCAACTGGGCGAGGGTCTAGACTATGAGTG
TGAATTGGTTGCCATCATCGGCAAGGAAGCTAAGAATGTGCCTGAGAGTC
AGGCCCTGGACTATGTTTTGGGTTATGCCGTTGGAAACGATGTCTCTCAT
CGTGAATGGCAGTTGAAGCACGGCGGAGGACAATGGGGCCTGGGCAAGGG
CTTCGACGGATGGGCGCCCTTTGGACCAGGTATTGTATCTTCGAAGCTAA
TCCGTGATCCCAACAACTTGCAGATCTCGACAAAACTGAACGGCCAAACG
GTTCAATCATCCTCCACCAAGGATATGATATTTAATGTGGCCAAGACAGT
GTCGTTCTTATCTCAGGGTACCACCTTGTTGCCCGGGGATGTAATCTTTA
CAGGAACACCCCAAGGTGTTGGTATGGGTCGAAAGCCTGCGCTCTGGCTC
AAGGATGGCGATTTGGTTGAGGTTTCTCTTGAGGGTGTCGGATCATGCCT
GAATCGCGTTGTCTTCGACAAGCCCTCTTCTAAGCTGTGAATGGCTACCT
TCTCCCGTCTGGTTCGTTTCTTGGCCAAGGACGGCCAGACTTACTACGGA
GACGCCCTATTGTCAGCGGGCGTGAGCGACATTGCCCAAGCCACCAAGGC
ACGGGTCATCCAGGGCGATATTTTCGGACAGCACCATGTCACAGACCAGA
TTGCCGATATTAAAATGCTCCTGGCGCCATTGGCGAGAAAAGACATTGGG
ACCGTGCGTTGTCTGGGACTCAATTATGAACAACACGCCAAAGAATCAAA
TCTACCCTTGCCGAAATTCCCTGTTCTCTTCTACAAGCCCGTCACCTCTG
TTACGGGACCTACAGATGACGTCCCGGTTTCCCGTATGGCTCAACTGGGC
GAGGGTCTAGACTATGAGTGTGAATTGGTTGCCATCATCGGCAAGGAAGC
TAAGAATGTGCCTGAGAGTCAGGCCCTGGACTATGTTTTGGGTTATGCCG
TTGGAAACGATGTCTCTCATCGTGAATGGCAGTTGAAGCACGGCGGAGGA
CAATGGGGCCTGGGCAAGGGCTTCGACGGATGGGCGCCCTTTGGACCAGG
TATTGTATCTTCGAAGCTAATCCGTGATCCCAACAACTTGCAGATCTCGA
CAAAACTGAACGGCCAAACGGTTCAATCATCCTCCACCAAGGATATGATA
TTTAATGTGGCCAAGACAGTGTCGTTCTTATCTCAGGGTACCACCTTGTT
GCCCGGGGATGTAATCTTTACAGGAACACCCCAAGGTGTTGGTATGGGTC
GAAAGCCTGCGCTCTGGCTCAAGGATGGCGATTTGGTTGAGGTTTCTCTT
GAGGGTGTCGGATCATGCCTGAATCGCGTTGTCTTCGACAAGCCCTCTTC
TAAGCTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011771-T1.utr5p1 | KJC3_011771-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011771-T1.utr3p1 | KJC3_011771-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036663 |
| DBxref | InterPro:IPR011234 |
| DBxref | PFAM:PF01557 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1560706..1562061 + |
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