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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1586071..1586852- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011784-T1 ID=KJC3_011784-T1|Name=KJC3_011784-T1|organism=Aspergillus niger KJC3|type=mRNA|length=782bp|location=Sequence derived from alignment at ch8:1586071..1586852- (Aspergillus niger KJC3)
ATGACTTCTGTGTCTCTGAAAGGCCCAGGCGCTGCGCAGACATACGATGG
TAATAACCTCTTTCAGGATGATCGTATGATTAATGATCCGTCTGCTAAAT
GATGGAATCTTAGGGGCTGGGCTACGAATCGCCATTGTCCATGCGAGGTG
GAATATGGGCATAATTGGTCCTCTCGTGGATGGGGCTAAGCGGAGCCTCC
TTGCAGCTGGAGTTTCTGAGAATAACATAACCGTCCACACTGTTCCAGGC
AGTTATGAGTTGCCCTTCGCCGTGCAGAAGTAAGCATATTGTCATCATGT
CTTTTCCTTCTCGGGCATTTCATTGGAGACTTCGGAGACTGATGCTGACT
TTGTACGCTGTCAGGTTATACGCGGCTTCCCAGATTGAAGCTTCCAAAGG
CTCAGCCTCGGCGCAAGGCATCAGTGCCACCGATTTGCTGTCCTCCTCTA
CAGCGGACCTCACGAAGGCATCTCCACAGTCGCCATCTTCCGATACGCCT
AGACCTTTTGATGCCATCATTGCCGTTGGAGTGCTGATTAAAGGGGAGAC
TATGCATTTCGAATACATCGCGGATGCCGTCTCTCATGGATTGATGCGTG
TGCAGCTCGATACGGGAGTGCCGGTCATCTTTGGCGTGCTTACTGTCTTG
ACTGAAGAGCAAGGCTTGGAAAGAGCCGGCATGGGCAAAAAAGGGATGCA
CAACCATGGAGAGGACTGGGGTAATGCTGCAGTAGAACTTGGAGCAAAGA
GAAGAGACTGGGCTGAGGGTAAAGTTGTTTAG back to topCoding sequence (CDS) from alignment at ch8:1586071..1586852- >KJC3_011784-T1 ID=KJC3_011784-T1|Name=KJC3_011784-T1|organism=Aspergillus niger KJC3|type=CDS|length=1899bp|location=Sequence derived from alignment at ch8:1586071..1586852- (Aspergillus niger KJC3)
GTTATACGCGGCTTCCCAGATTGAAGCTTCCAAAGGCTCAGCCTCGGCGC
AAGGCATCAGTGCCACCGATTTGCTGTCCTCCTCTACAGCGGACCTCACG
AAGGCATCTCCACAGTCGCCATCTTCCGATACGCCTAGACCTTTTGATGC
CATCATTGCCGTTGGAGTGCTGATTAAAGGGGAGACTATGCATTTCGAAT
ACATCGCGGATGCCGTCTCTCATGGATTGATGCGTGTGCAGCTCGATACG
GGAGTGCCGGTCATCTTTGGCGTGCTTACTGTCTTGACTGAAGAGCAAGG
CTTGGAAAGAGCCGGCATGGGCAAAAAAGGGATGCACAACCATGGAGAGG
ACTGGGGTAATGCTGCAGTAGAACTTGGAGCAAAGAGAAGAGACTGGGCT
GAGGGTAAAGTTGTTTAGGGGCTGGGCTACGAATCGCCATTGTCCATGCG
AGGTGGAATATGGGCATAATTGGTCCTCTCGTGGATGGGGCTAAGCGGAG
CCTCCTTGCAGCTGGAGTTTCTGAGAATAACATAACCGTCCACACTGTTC
CAGGCAGTTATGAGTTGCCCTTCGCCGTGCAGAAATGACTTCTGTGTCTC
TGAAAGGCCCAGGCGCTGCGCAGACATACGATGGTTATACGCGGCTTCCC
AGATTGAAGCTTCCAAAGGCTCAGCCTCGGCGCAAGGCATCAGTGCCACC
GATTTGCTGTCCTCCTCTACAGCGGACCTCACGAAGGCATCTCCACAGTC
GCCATCTTCCGATACGCCTAGACCTTTTGATGCCATCATTGCCGTTGGAG
TGCTGATTAAAGGGGAGACTATGCATTTCGAATACATCGCGGATGCCGTC
TCTCATGGATTGATGCGTGTGCAGCTCGATACGGGAGTGCCGGTCATCTT
TGGCGTGCTTACTGTCTTGACTGAAGAGCAAGGCTTGGAAAGAGCCGGCA
TGGGCAAAAAAGGGATGCACAACCATGGAGAGGACTGGGGTAATGCTGCA
GTAGAACTTGGAGCAAAGAGAAGAGACTGGGCTGAGGGTAAAGTTGTTTA
GGGGCTGGGCTACGAATCGCCATTGTCCATGCGAGGTGGAATATGGGCAT
AATTGGTCCTCTCGTGGATGGGGCTAAGCGGAGCCTCCTTGCAGCTGGAG
TTTCTGAGAATAACATAACCGTCCACACTGTTCCAGGCAGTTATGAGTTG
CCCTTCGCCGTGCAGAAATGACTTCTGTGTCTCTGAAAGGCCCAGGCGCT
GCGCAGACATACGATGGTTATACGCGGCTTCCCAGATTGAAGCTTCCAAA
GGCTCAGCCTCGGCGCAAGGCATCAGTGCCACCGATTTGCTGTCCTCCTC
TACAGCGGACCTCACGAAGGCATCTCCACAGTCGCCATCTTCCGATACGC
CTAGACCTTTTGATGCCATCATTGCCGTTGGAGTGCTGATTAAAGGGGAG
ACTATGCATTTCGAATACATCGCGGATGCCGTCTCTCATGGATTGATGCG
TGTGCAGCTCGATACGGGAGTGCCGGTCATCTTTGGCGTGCTTACTGTCT
TGACTGAAGAGCAAGGCTTGGAAAGAGCCGGCATGGGCAAAAAAGGGATG
CACAACCATGGAGAGGACTGGGGTAATGCTGCAGTAGAACTTGGAGCAAA
GAGAAGAGACTGGGCTGAGGGTAAAGTTGTTTAGGGGCTGGGCTACGAAT
CGCCATTGTCCATGCGAGGTGGAATATGGGCATAATTGGTCCTCTCGTGG
ATGGGGCTAAGCGGAGCCTCCTTGCAGCTGGAGTTTCTGAGAATAACATA
ACCGTCCACACTGTTCCAGGCAGTTATGAGTTGCCCTTCGCCGTGCAGAA
ATGACTTCTGTGTCTCTGAAAGGCCCAGGCGCTGCGCAGACATACGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0009349 | riboflavin synthase complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000906 | 6,7-dimethyl-8-ribityllumazine synthase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009231 | riboflavin biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264OYZ |
| DBxref | InterPro:IPR034964 |
| DBxref | InterPro:IPR036467 |
| DBxref | InterPro:IPR002180 |
| DBxref | PFAM:PF00885 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1586071..1586852 - |
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