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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1598600..1599799- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011788-T1 ID=KJC3_011788-T1|Name=KJC3_011788-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1200bp|location=Sequence derived from alignment at ch8:1598600..1599799- (Aspergillus niger KJC3)
ATGCGTTCATTCTTCAAGAAGCCTTCATGGGCAAGCAGGGGGGATGAGGG
AACAGACCCGAATTTCTACCGTCATGCTGGCCAAGTCTATAATGACATTA
TCACTGCCAACCGAGAAGCACGTGCTAACCGACTGTCTATAATGCACGCA
CCAGAACATGAACCAGAGCACAAAAATTCCAAACGTCGACGTCTCTCCTG
CGGACAGCCCCCCGCAGAAAGTTCATCAGGGGGCCTCCCTCACGATGAAG
TACCGCGCAATGTGGAAACACCGTTAAACTCTAATGCTTCTTATAAGCAC
TTACAAGAGACCAATAACAACGAAAACAACAACGACAATAGTTGTGGTCC
ATCCGCAGGACTTTCATCCTGTGGCATCACAGCTGGAACTGCAACGGAGA
CTGGCGTCCAGTGTTGTGAGTCACCACCTGATGTGGAGCTCATTCACGGT
GGGACAACCGGTGCGCAATCAGAAGTTACGAAGGCAGTCGATGAGAATAA
AATAGCTTCCGTGAAAGAGTCACATTACCAGAATGCCCGAGAAGTTGATG
AGACTGTCACACCCCATAATCACAGTCTTGCCCATAATCAAGCAATAGTT
CAGATCCTCATTACCTCAAAAATCCCAAATACCAAACCATTGATTGTCCG
CCGAAAAATGAACCAACCTTTAAAGGATGTTCGTCTAGCATGGTGTAATC
GCCAGAAATTCACCAAAGAAATGCAAGATTCGGTCTTCCTGACCTGGAAG
GGTAAGAGGCTGTTTGATGTTACTACATGCCGAAGCCTGGGAATCCATGC
AAAAAGCGGTTACTTGAATGAATATGACACATTTCAGTTAGATGTGGAGG
ATATACAAGTCCATATGGAAGCTTCTACCGAAGACATTCTCAGCGCCGAT
CTATATGAATCACAGACTGTGACTGACACTAAGTCCAGTCCGGAATATAC
GTGCTGGGGCGGAGCAACTTCGTCCCCAGACATGATAATATTAAAGTGTC
CTGGATTTAGCGATCTGAAGGTAAAGCTGAATATGGAGATGCAGGTATCA
GAGCTAGTTGCTACCTTTCGTGCTGCTAGGCAGATACCCGCAACCCGCGA
TATACAACTTGTATTTGACGGTGACCGCTTAGAATATAAGGCTTATCTTG
CAGACTACGAGCTCATGAATAGCGATCTTGTGGAGGTTATGATCAAGTGA
back to topCoding sequence (CDS) from alignment at ch8:1598600..1599799- >KJC3_011788-T1 ID=KJC3_011788-T1|Name=KJC3_011788-T1|organism=Aspergillus niger KJC3|type=CDS|length=1200bp|location=Sequence derived from alignment at ch8:1598600..1599799- (Aspergillus niger KJC3)
ATGCGTTCATTCTTCAAGAAGCCTTCATGGGCAAGCAGGGGGGATGAGGG
AACAGACCCGAATTTCTACCGTCATGCTGGCCAAGTCTATAATGACATTA
TCACTGCCAACCGAGAAGCACGTGCTAACCGACTGTCTATAATGCACGCA
CCAGAACATGAACCAGAGCACAAAAATTCCAAACGTCGACGTCTCTCCTG
CGGACAGCCCCCCGCAGAAAGTTCATCAGGGGGCCTCCCTCACGATGAAG
TACCGCGCAATGTGGAAACACCGTTAAACTCTAATGCTTCTTATAAGCAC
TTACAAGAGACCAATAACAACGAAAACAACAACGACAATAGTTGTGGTCC
ATCCGCAGGACTTTCATCCTGTGGCATCACAGCTGGAACTGCAACGGAGA
CTGGCGTCCAGTGTTGTGAGTCACCACCTGATGTGGAGCTCATTCACGGT
GGGACAACCGGTGCGCAATCAGAAGTTACGAAGGCAGTCGATGAGAATAA
AATAGCTTCCGTGAAAGAGTCACATTACCAGAATGCCCGAGAAGTTGATG
AGACTGTCACACCCCATAATCACAGTCTTGCCCATAATCAAGCAATAGTT
CAGATCCTCATTACCTCAAAAATCCCAAATACCAAACCATTGATTGTCCG
CCGAAAAATGAACCAACCTTTAAAGGATGTTCGTCTAGCATGGTGTAATC
GCCAGAAATTCACCAAAGAAATGCAAGATTCGGTCTTCCTGACCTGGAAG
GGTAAGAGGCTGTTTGATGTTACTACATGCCGAAGCCTGGGAATCCATGC
AAAAAGCGGTTACTTGAATGAATATGACACATTTCAGTTAGATGTGGAGG
ATATACAAGTCCATATGGAAGCTTCTACCGAAGACATTCTCAGCGCCGAT
CTATATGAATCACAGACTGTGACTGACACTAAGTCCAGTCCGGAATATAC
GTGCTGGGGCGGAGCAACTTCGTCCCCAGACATGATAATATTAAAGTGTC
CTGGATTTAGCGATCTGAAGGTAAAGCTGAATATGGAGATGCAGGTATCA
GAGCTAGTTGCTACCTTTCGTGCTGCTAGGCAGATACCCGCAACCCGCGA
TATACAACTTGTATTTGACGGTGACCGCTTAGAATATAAGGCTTATCTTG
CAGACTACGAGCTCATGAATAGCGATCTTGTGGAGGTTATGATCAAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR000626 |
| DBxref | InterPro:IPR022617 |
| DBxref | PFAM:PF11976 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1598600..1599799 - |
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