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KJC3_011790-T1, KJC3_011790-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011790-T1
Unique NameKJC3_011790-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1601102..1602302+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011790-T1 ID=KJC3_011790-T1|Name=KJC3_011790-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1201bp|location=Sequence derived from alignment at ch8:1601102..1602302+ (Aspergillus niger KJC3)
ATGACTTTACAGGCAATCAGATATAATGATGGCGATTTGTCTATTATAGA
TCAGTTGCAGCTTCCATATGTTGAACGTTACATAACGGTACAATCGAGTG
AGGAAGCATGGCACGCAATAAAAGATATGCGAGTAAGAGGGGCACCCGCT
ATTGCCATTGTAGCGGCCCTCGCTCTTGCATCCGAGCTTCATAGGCTCAT
GGCATGCAATAACATACCTTCGGAAGCCCCAGAGGTTCAAGCCTTTATTG
CGAAAAAGCTCGATTATCTCGTGAGCAGCAGGCCCACAGCAGTGAATCTT
GCCGATGCTGCTCGGAAACTCAGGGCCGTGGCGAGTGATCATACACAAAG
GCCTGGATCGACCGGGCGCAGCGTCGCTACTGCTTTGATACAAGCAGCAG
AGGAAATGCTGAAGAAGGATATCGAGGACAATAAAAACATAGGAAAGCAT
GGTGCCCAATGGATCATGGCCAATGCCGCGGGTAAGCCGAAGGCTACTGT
TCTCACTCATTGCAATACGGGGTAAGTACAGCGAAGCTCAACTGCAGGTT
ATCCGGTTCTAACCCGCTGTCAGCTCCCTTGCAACATCAGGATACGGCAC
TGCGCTCGGGGTTATCCGCGCCCTTGCGTCTGCAGACAATTTGAACCATG
CTTACTGCACCGAGACACGACCCTACAATCAAGGATCTCGGTTGACTGCG
TTCGAATTGGTCCACGACCGTCTCCCCGCCACCCTCATAACAGACTCCAT
GGCCGCTGCTCTACTTGCGAAGTCTGGTTCTAAGGTAGATGCCATCGTAG
TGGGGGCGGATAGGGTGGCTGCTAACGGAGATACGGCGAATAAAATTGGT
ACTTATGGCCTCGCTGTGCTTGCAAGGTATCACGGTGTAAAGTTCCTCGT
CGCTGCACCGCTTACTACAATTGATCTGGCCACCCCATCCGGGAATGAAA
TCATAATCGAGGAACGTGCGGCCTCCGAGGTCACAAATGTCAGAGGGCCG
CGTGCCAGCAATTCTACCAATGGGATTGAACTAGAAACTGTGCGCATAGC
CGCCGATGGCATCGATGTCTGGAACCCGGCCTTTGATGTCACACCGTCCA
CACTTATTGACGGTATCATTACAGAGAGGGGCGTGGTCGAGAAGGACGCC
AGTGGACAATTTCACTTGGAGGACTTGTTTCGCAACTCATCTTCAACATG
A
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Coding sequence (CDS) from alignment at ch8:1601102..1602302+

>KJC3_011790-T1 ID=KJC3_011790-T1|Name=KJC3_011790-T1|organism=Aspergillus niger KJC3|type=CDS|length=2298bp|location=Sequence derived from alignment at ch8:1601102..1602302+ (Aspergillus niger KJC3)
ATGACTTTACAGGCAATCAGATATAATGATGGCGATTTGTCTATTATAGA
TCAGTTGCAGCTTCCATATGTTGAACGTTACATAACGGTACAATCGAGTG
AGGAAGCATGGCACGCAATAAAAGATATGCGAGTAAGAGGGGCACCCGCT
ATTGCCATTGTAGCGGCCCTCGCTCTTGCATCCGAGCTTCATAGGCTCAT
GGCATGCAATAACATACCTTCGGAAGCCCCAGAGGTTCAAGCCTTTATTG
CGAAAAAGCTCGATTATCTCGTGAGCAGCAGGCCCACAGCAGTGAATCTT
GCCGATGCTGCTCGGAAACTCAGGGCCGTGGCGAGTGATCATACACAAAG
GCCTGGATCGACCGGGCGCAGCGTCGCTACTGCTTTGATACAAGCAGCAG
AGGAAATGCTGAAGAAGGATATCGAGGACAATAAAAACATAGGAAAGCAT
GGTGCCCAATGGATCATGGCCAATGCCGCGGGTAAGCCGAAGGCTACTGT
TCTCACTCATTGCAATACGGGCTCCCTTGCAACATCAGGATACGGCACTG
CGCTCGGGGTTATCCGCGCCCTTGCGTCTGCAGACAATTTGAACCATGCT
TACTGCACCGAGACACGACCCTACAATCAAGGATCTCGGTTGACTGCGTT
CGAATTGGTCCACGACCGTCTCCCCGCCACCCTCATAACAGACTCCATGG
CCGCTGCTCTACTTGCGAAGTCTGGTTCTAAGGTAGATGCCATCGTAGTG
GGGGCGGATAGGGTGGCTGCTAACGGAGATACGGCGAATAAAATTGGTAC
TTATGGCCTCGCTGTGCTTGCAAGGTATCACGGTGTAAAGTTCCTCGTCG
CTGCACCGCTTACTACAATTGATCTGGCCACCCCATCCGGGAATGAAATC
ATAATCGAGGAACGTGCGGCCTCCGAGGTCACAAATGTCAGAGGGCCGCG
TGCCAGCAATTCTACCAATGGGATTGAACTAGAAACTGTGCGCATAGCCG
CCGATGGCATCGATGTCTGGAACCCGGCCTTTGATGTCACACCGTCCACA
CTTATTGACGGTATCATTACAGAGAGGGGCGTGGTCGAGAAGGACGCCAG
TGGACAATTTCACTTGGAGGACTTGTTTCGCAACTCATCTTCAACATGAA
TGACTTTACAGGCAATCAGATATAATGATGGCGATTTGTCTATTATAGAT
CAGTTGCAGCTTCCATATGTTGAACGTTACATAACGGTACAATCGAGTGA
GGAAGCATGGCACGCAATAAAAGATATGCGAGTAAGAGGGGCACCCGCTA
TTGCCATTGTAGCGGCCCTCGCTCTTGCATCCGAGCTTCATAGGCTCATG
GCATGCAATAACATACCTTCGGAAGCCCCAGAGGTTCAAGCCTTTATTGC
GAAAAAGCTCGATTATCTCGTGAGCAGCAGGCCCACAGCAGTGAATCTTG
CCGATGCTGCTCGGAAACTCAGGGCCGTGGCGAGTGATCATACACAAAGG
CCTGGATCGACCGGGCGCAGCGTCGCTACTGCTTTGATACAAGCAGCAGA
GGAAATGCTGAAGAAGGATATCGAGGACAATAAAAACATAGGAAAGCATG
GTGCCCAATGGATCATGGCCAATGCCGCGGGTAAGCCGAAGGCTACTGTT
CTCACTCATTGCAATACGGGCTCCCTTGCAACATCAGGATACGGCACTGC
GCTCGGGGTTATCCGCGCCCTTGCGTCTGCAGACAATTTGAACCATGCTT
ACTGCACCGAGACACGACCCTACAATCAAGGATCTCGGTTGACTGCGTTC
GAATTGGTCCACGACCGTCTCCCCGCCACCCTCATAACAGACTCCATGGC
CGCTGCTCTACTTGCGAAGTCTGGTTCTAAGGTAGATGCCATCGTAGTGG
GGGCGGATAGGGTGGCTGCTAACGGAGATACGGCGAATAAAATTGGTACT
TATGGCCTCGCTGTGCTTGCAAGGTATCACGGTGTAAAGTTCCTCGTCGC
TGCACCGCTTACTACAATTGATCTGGCCACCCCATCCGGGAATGAAATCA
TAATCGAGGAACGTGCGGCCTCCGAGGTCACAAATGTCAGAGGGCCGCGT
GCCAGCAATTCTACCAATGGGATTGAACTAGAAACTGTGCGCATAGCCGC
CGATGGCATCGATGTCTGGAACCCGGCCTTTGATGTCACACCGTCCACAC
TTATTGACGGTATCATTACAGAGAGGGGCGTGGTCGAGAAGGACGCCAGT
GGACAATTTCACTTGGAGGACTTGTTTCGCAACTCATCTTCAACATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO:0044249cellular biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MRI1KJC3_011790Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011790-T1.exon1KJC3_011790-T1.exon1Aspergillus niger KJC3exon
KJC3_011790-T1.exon2KJC3_011790-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011790-T1.cdsKJC3_011790-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011790-T1KJC3_011790-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037171
DBxrefInterPro:IPR042529
DBxrefInterPro:IPR000649
DBxrefInterPro:IPR011559
DBxrefInterPro:IPR005251
DBxrefPFAM:PF01008
ProductS-methyl-5-thioribose-1-phosphate isomerase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1601102..1602302 +
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