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KJC3_011791-T2, KJC3_011791-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011791-T2
Unique NameKJC3_011791-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1692171..1693635+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011791-T2 ID=KJC3_011791-T2|Name=KJC3_011791-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1465bp|location=Sequence derived from alignment at ch8:1692171..1693635+ (Aspergillus niger KJC3)
CCTGTGTAACACATAACACAGCGACGCCACTTTTCAACCTGCCTTTAGTA
ATCAGACGCTCTAGGTAAGTTGCCGCCGCCCCAAGGGAGATCGTTGGGGG
ACCACTTTTAGTTAGTTCTGCACGCTCAATTGCAACCCTGCCACGTACAG
GGCCATAACAATCAAAATCAGTATTCAACCACCTTTACTGTATACACTGG
TGCCAGACTTGATCGAAGCAACATCTAATTGCTCAACGCTTGAAGCAGAA
AACAGAGTTCAACCACAGATTGAATTTAGCTTCATCTCATCATGTCGTTT
TCAAACCTTGTTTCTGACCTTGCGTTCAGAGACGCTCAGGATGACCGAAG
TTCTCAAATATCCCATGCACGGTCTCAAGCTACCGCTCGATCATATACCA
GCACGGCTGCGACCAGCGTTAGCATATCTGGTGATATCTCTAGCCAGCTT
CATTCTGGCTATAGTCATCCACTGAGTAGATCATGGCAAGCCGAGAAGCA
GTTGACCAAGGTTCGTACTACGACATAGTCCTGTACTAGCATGGTCTAAT
TGTGCGCAGGAGATGCTCATATATCCCCTTTTCATTACCGATAACCCTGA
TGAGGAGACGCCTATTCCATCCCTTCCAAATCAGTATCGCCGAGGGCTGA
ATCGGTTGGTCCCCTTCTTAAGACCATTAGTACAGAAAGGCCTGCGTTCC
GTGATTCTGTTCGGTGTCCCTTTGCATCCATCTGCAAAGGATGCGCTGGG
AACCGCTGCAGATGACCCGACCGGTCCAGTAGTTCAGGCCATCCGCCTTC
TTCGTTCGCGCTTTCCTCAACTTTATATCGTGACGGATGTTTGTCTTTGT
GAATATACCTCACATGGTCATTGCGGGATACTACGTGAGGATGGGACGCT
CGATAACGCACAGTCCGTTGATAGAATCTCAGATGTAGCCCTCGCCTATG
CTGCTGCCGGTGCTCACTGCGTGGCTCCGTCAGATATGAATGACGGCAGA
GTCCGCGCCATAAAGCTGAAGCTTATTGAAGCTGGTATAGCTCATCGTGT
CCTCCTAATGTCCTACAGTGCAAAATTCAGTGGATGTCTATATGGTCCCT
TCCGAGATGCCGCAGGCTCTTGCCCATCCTTCGGAGACCGCAGGTGTTAC
CAATTACCCCCAGGTGGCCGGGGGCTTGCTCGGCGAGCGATACAGCGCGA
TATTGGTGAGGGCGCAGACATCATAATGGTGAAGCCCGCTAGTAGCTATT
TGGATATCATACGGGACGCCAAGGAGCTCGCCAAAGACATGCCAGTTGCC
GCTTACCAAGTTAGCGGAGAGTATGCCATGATACATGCAGGGGCTAAGGC
TGGCGTTTTCGATTTGAAATCAATGGCTTTCGAGAGCACAGAGGGTATAC
TACGGGCAGGAGCTGGTATTATTGTGAGCTACTTTGTGCCCGACTTTCTG
GATTGGCTTTCTTAA
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Coding sequence (CDS) from alignment at ch8:1692171..1693635+

>KJC3_011791-T2 ID=KJC3_011791-T2|Name=KJC3_011791-T2|organism=Aspergillus niger KJC3|type=CDS|length=903bp|location=Sequence derived from alignment at ch8:1692171..1693635+ (Aspergillus niger KJC3)
ATGCTCATATATCCCCTTTTCATTACCGATAACCCTGATGAGGAGACGCC
TATTCCATCCCTTCCAAATCAGTATCGCCGAGGGCTGAATCGGTTGGTCC
CCTTCTTAAGACCATTAGTACAGAAAGGCCTGCGTTCCGTGATTCTGTTC
GGTGTCCCTTTGCATCCATCTGCAAAGGATGCGCTGGGAACCGCTGCAGA
TGACCCGACCGGTCCAGTAGTTCAGGCCATCCGCCTTCTTCGTTCGCGCT
TTCCTCAACTTTATATCGTGACGGATGTTTGTCTTTGTGAATATACCTCA
CATGGTCATTGCGGGATACTACGTGAGGATGGGACGCTCGATAACGCACA
GTCCGTTGATAGAATCTCAGATGTAGCCCTCGCCTATGCTGCTGCCGGTG
CTCACTGCGTGGCTCCGTCAGATATGAATGACGGCAGAGTCCGCGCCATA
AAGCTGAAGCTTATTGAAGCTGGTATAGCTCATCGTGTCCTCCTAATGTC
CTACAGTGCAAAATTCAGTGGATGTCTATATGGTCCCTTCCGAGATGCCG
CAGGCTCTTGCCCATCCTTCGGAGACCGCAGGTGTTACCAATTACCCCCA
GGTGGCCGGGGGCTTGCTCGGCGAGCGATACAGCGCGATATTGGTGAGGG
CGCAGACATCATAATGGTGAAGCCCGCTAGTAGCTATTTGGATATCATAC
GGGACGCCAAGGAGCTCGCCAAAGACATGCCAGTTGCCGCTTACCAAGTT
AGCGGAGAGTATGCCATGATACATGCAGGGGCTAAGGCTGGCGTTTTCGA
TTTGAAATCAATGGCTTTCGAGAGCACAGAGGGTATACTACGGGCAGGAG
CTGGTATTATTGTGAGCTACTTTGTGCCCGACTTTCTGGATTGGCTTTCT
TAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004655porphobilinogen synthase activity
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HEM2_1KJC3_011791Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011791-T2KJC3_011791-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011791-T2.utr5p1KJC3_011791-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_011791-T2.utr5p2KJC3_011791-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_011791-T2.utr5p3KJC3_011791-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011791-T2.exon1KJC3_011791-T2.exon1Aspergillus niger KJC3exon
KJC3_011791-T2.exon2KJC3_011791-T2.exon2Aspergillus niger KJC3exon
KJC3_011791-T2.exon3KJC3_011791-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011791-T2.cdsKJC3_011791-T2.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR030656
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001731
DBxrefPFAM:PF00490
Product variant 2
ProductAminolevulinate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1692171..1693635 +
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