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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1737342..1739011- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011805-T1 ID=KJC3_011805-T1|Name=KJC3_011805-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1670bp|location=Sequence derived from alignment at ch8:1737342..1739011- (Aspergillus niger KJC3)
CTTCCACTCCTTCCCTCGCTCGAAAACGCTTGGGCATCGCCGTTGCTCTG
TTCTCCTCGATCTACTTACTTACTACTACTCCTTGGTGGGCTGCCCCCCT
CTTCTTTTCTTCTTTCGCTGTCAATTCCTCTCCAATCTCTCCCATTTGTT
TACTACCTCGTTCTCTTCTTCACCTTTCCCTCTCACTACCATCTCCCCAC
CCCTTGGGACGCCCGTCGACCGATAGATATACCATCTCCCGTTTGCTCTC
AATCCCCTCTCTCGTTCTCTTCAAGCGTCCTTCTTCAAAATGGCAGCCGC
AGCCAATTCGTCTTCCACCAATCCCGCGACGGTCTTCCCTCGCAGCCACG
TCGGTTTTGACAGCATCACCTCCCAGATTGAGCGCAAGCTGTTGAAACGT
GGATTTCAGTTCAATGTCATGTGCGTTGGTGAGTCGACTCTTTCACCTAC
CTACCATGTCCCGAGAAAAGAGAGCCCCTTCCCTCCCAGCTAACACGGAC
CGAATAGGCCAGACGGGTCTGGGCAAGTCCACTTTGATCAACACCATCTT
TGCTTCGCACCTTATCGACTCCAAGGGTCGCATGACCCCCAACGAACCTG
TCCGCTCGACCACCGAGATTCAGACCGTTTCGCATAGTATGATCTCCACG
CCATTGCCGCGTCACTACTGGCAGAACTAACCGCCTCGTCTTTAGTCATT
GAGGAGAACGGCGTGCGTCTGCGTCTCAACATTGTTGACACTCCTGGATA
CGGTGACCAGGTCAACAACGACAGATGGTATTAGACATCCACCCACCCGC
AACATCGTTTCCCGAGCTAACGTACTACTAGCTGGGACCCCATCGTGAAA
TATATCAAGGATCAGCACTCCGCATACCTCCGCAAGGAGCTTACCGCTCA
GCGTGACCGCTACATCCAGGATACCCGTATTCACTGCTGTCTGTTCTTCA
TCCAGCCTTCTGGCCATGCGTAAGTCTCATCGATCTTCTGTCACCCAAAC
GTCTCCCGGAGCCTGACCAACTCTTTTGTATAGTCTCAAGCCCATTGATA
TTGTTGTGCTGAAGAAGCTGTCGGACGTTGTAAATGTTGTCCCCGTCATC
GCCAAGGCCGATTCCCTTACCCTCGAAGAGCGTCAAGCATTCAAGGAGAG
AATCAAGGAAGAGTTTGCCTTCCACAACTTGAAGATGTACCCCTACGACA
ATGACGAACTCGATGATGAAGAGCGTGCCGTCAACGTCCAGATCAAGGTA
CGCGAATCGTTGTTGTACAGCACTCCGTTTATATCTGCCTCTAACGCCGG
TCCAGGACATCATTCCCTTTGCTGTTGTGGGTAGCGAACGTACCATCGTC
GTCAATGGCCAGCAGGTTCGCGGCCGCCAGAACCGCTGGGGTGTCATCAA
CGTGGAGGATGAGAACCACTGTGAATTTGTTTACCTGAGGAACTTCCTCA
CTCGCACTCATCTGCAGGACCTTATCGAGACGACCAGCCAGATCCACTAT
GAGACCTTCCGTGCCAAGCAGCTGCTGGCATTGAAGGAAAGCAGTGCCGC
TGGGAGCCACCCCGGTAGCAGCCGTCCCATCAGTCCCTCGGCGGACAGAG
AGCTCAGCCGCAACTCGCAACGCATGACTATGAACGGTTATTGATTTGGC
TGAGGATCAGTTGATGGCGG back to topCoding sequence (CDS) from alignment at ch8:1737342..1739011- >KJC3_011805-T1 ID=KJC3_011805-T1|Name=KJC3_011805-T1|organism=Aspergillus niger KJC3|type=CDS|length=6246bp|location=Sequence derived from alignment at ch8:1737342..1739011- (Aspergillus niger KJC3)
GACATCATTCCCTTTGCTGTTGTGGGTAGCGAACGTACCATCGTCGTCAA
TGGCCAGCAGGTTCGCGGCCGCCAGAACCGCTGGGGTGTCATCAACGTGG
AGGATGAGAACCACTGTGAATTTGTTTACCTGAGGAACTTCCTCACTCGC
ACTCATCTGCAGGACCTTATCGAGACGACCAGCCAGATCCACTATGAGAC
CTTCCGTGCCAAGCAGCTGCTGGCATTGAAGGAAAGCAGTGCCGCTGGGA
GCCACCCCGGTAGCAGCCGTCCCATCAGTCCCTCGGCGGACAGAGAGCTC
AGCCGCAACTCGCAACGCATGACTATGAACGGTTATTGATCTCAAGCCCA
TTGATATTGTTGTGCTGAAGAAGCTGTCGGACGTTGTAAATGTTGTCCCC
GTCATCGCCAAGGCCGATTCCCTTACCCTCGAAGAGCGTCAAGCATTCAA
GGAGAGAATCAAGGAAGAGTTTGCCTTCCACAACTTGAAGATGTACCCCT
ACGACAATGACGAACTCGATGATGAAGAGCGTGCCGTCAACGTCCAGATC
AAGCTGGGACCCCATCGTGAAATATATCAAGGATCAGCACTCCGCATACC
TCCGCAAGGAGCTTACCGCTCAGCGTGACCGCTACATCCAGGATACCCGT
ATTCACTGCTGTCTGTTCTTCATCCAGCCTTCTGGCCATGCTCATTGAGG
AGAACGGCGTGCGTCTGCGTCTCAACATTGTTGACACTCCTGGATACGGT
GACCAGGTCAACAACGACAGATGGCCAGACGGGTCTGGGCAAGTCCACTT
TGATCAACACCATCTTTGCTTCGCACCTTATCGACTCCAAGGGTCGCATG
ACCCCCAACGAACCTGTCCGCTCGACCACCGAGATTCAGACCGTTTCGCA
TAATGGCAGCCGCAGCCAATTCGTCTTCCACCAATCCCGCGACGGTCTTC
CCTCGCAGCCACGTCGGTTTTGACAGCATCACCTCCCAGATTGAGCGCAA
GCTGTTGAAACGTGGATTTCAGTTCAATGTCATGTGCGTTGGACATCATT
CCCTTTGCTGTTGTGGGTAGCGAACGTACCATCGTCGTCAATGGCCAGCA
GGTTCGCGGCCGCCAGAACCGCTGGGGTGTCATCAACGTGGAGGATGAGA
ACCACTGTGAATTTGTTTACCTGAGGAACTTCCTCACTCGCACTCATCTG
CAGGACCTTATCGAGACGACCAGCCAGATCCACTATGAGACCTTCCGTGC
CAAGCAGCTGCTGGCATTGAAGGAAAGCAGTGCCGCTGGGAGCCACCCCG
GTAGCAGCCGTCCCATCAGTCCCTCGGCGGACAGAGAGCTCAGCCGCAAC
TCGCAACGCATGACTATGAACGGTTATTGATCTCAAGCCCATTGATATTG
TTGTGCTGAAGAAGCTGTCGGACGTTGTAAATGTTGTCCCCGTCATCGCC
AAGGCCGATTCCCTTACCCTCGAAGAGCGTCAAGCATTCAAGGAGAGAAT
CAAGGAAGAGTTTGCCTTCCACAACTTGAAGATGTACCCCTACGACAATG
ACGAACTCGATGATGAAGAGCGTGCCGTCAACGTCCAGATCAAGCTGGGA
CCCCATCGTGAAATATATCAAGGATCAGCACTCCGCATACCTCCGCAAGG
AGCTTACCGCTCAGCGTGACCGCTACATCCAGGATACCCGTATTCACTGC
TGTCTGTTCTTCATCCAGCCTTCTGGCCATGCTCATTGAGGAGAACGGCG
TGCGTCTGCGTCTCAACATTGTTGACACTCCTGGATACGGTGACCAGGTC
AACAACGACAGATGGCCAGACGGGTCTGGGCAAGTCCACTTTGATCAACA
CCATCTTTGCTTCGCACCTTATCGACTCCAAGGGTCGCATGACCCCCAAC
GAACCTGTCCGCTCGACCACCGAGATTCAGACCGTTTCGCATAATGGCAG
CCGCAGCCAATTCGTCTTCCACCAATCCCGCGACGGTCTTCCCTCGCAGC
CACGTCGGTTTTGACAGCATCACCTCCCAGATTGAGCGCAAGCTGTTGAA
ACGTGGATTTCAGTTCAATGTCATGTGCGTTGGACATCATTCCCTTTGCT
GTTGTGGGTAGCGAACGTACCATCGTCGTCAATGGCCAGCAGGTTCGCGG
CCGCCAGAACCGCTGGGGTGTCATCAACGTGGAGGATGAGAACCACTGTG
AATTTGTTTACCTGAGGAACTTCCTCACTCGCACTCATCTGCAGGACCTT
ATCGAGACGACCAGCCAGATCCACTATGAGACCTTCCGTGCCAAGCAGCT
GCTGGCATTGAAGGAAAGCAGTGCCGCTGGGAGCCACCCCGGTAGCAGCC
GTCCCATCAGTCCCTCGGCGGACAGAGAGCTCAGCCGCAACTCGCAACGC
ATGACTATGAACGGTTATTGATCTCAAGCCCATTGATATTGTTGTGCTGA
AGAAGCTGTCGGACGTTGTAAATGTTGTCCCCGTCATCGCCAAGGCCGAT
TCCCTTACCCTCGAAGAGCGTCAAGCATTCAAGGAGAGAATCAAGGAAGA
GTTTGCCTTCCACAACTTGAAGATGTACCCCTACGACAATGACGAACTCG
ATGATGAAGAGCGTGCCGTCAACGTCCAGATCAAGCTGGGACCCCATCGT
GAAATATATCAAGGATCAGCACTCCGCATACCTCCGCAAGGAGCTTACCG
CTCAGCGTGACCGCTACATCCAGGATACCCGTATTCACTGCTGTCTGTTC
TTCATCCAGCCTTCTGGCCATGCTCATTGAGGAGAACGGCGTGCGTCTGC
GTCTCAACATTGTTGACACTCCTGGATACGGTGACCAGGTCAACAACGAC
AGATGGCCAGACGGGTCTGGGCAAGTCCACTTTGATCAACACCATCTTTG
CTTCGCACCTTATCGACTCCAAGGGTCGCATGACCCCCAACGAACCTGTC
CGCTCGACCACCGAGATTCAGACCGTTTCGCATAATGGCAGCCGCAGCCA
ATTCGTCTTCCACCAATCCCGCGACGGTCTTCCCTCGCAGCCACGTCGGT
TTTGACAGCATCACCTCCCAGATTGAGCGCAAGCTGTTGAAACGTGGATT
TCAGTTCAATGTCATGTGCGTTGGACATCATTCCCTTTGCTGTTGTGGGT
AGCGAACGTACCATCGTCGTCAATGGCCAGCAGGTTCGCGGCCGCCAGAA
CCGCTGGGGTGTCATCAACGTGGAGGATGAGAACCACTGTGAATTTGTTT
ACCTGAGGAACTTCCTCACTCGCACTCATCTGCAGGACCTTATCGAGACG
ACCAGCCAGATCCACTATGAGACCTTCCGTGCCAAGCAGCTGCTGGCATT
GAAGGAAAGCAGTGCCGCTGGGAGCCACCCCGGTAGCAGCCGTCCCATCA
GTCCCTCGGCGGACAGAGAGCTCAGCCGCAACTCGCAACGCATGACTATG
AACGGTTATTGATCTCAAGCCCATTGATATTGTTGTGCTGAAGAAGCTGT
CGGACGTTGTAAATGTTGTCCCCGTCATCGCCAAGGCCGATTCCCTTACC
CTCGAAGAGCGTCAAGCATTCAAGGAGAGAATCAAGGAAGAGTTTGCCTT
CCACAACTTGAAGATGTACCCCTACGACAATGACGAACTCGATGATGAAG
AGCGTGCCGTCAACGTCCAGATCAAGCTGGGACCCCATCGTGAAATATAT
CAAGGATCAGCACTCCGCATACCTCCGCAAGGAGCTTACCGCTCAGCGTG
ACCGCTACATCCAGGATACCCGTATTCACTGCTGTCTGTTCTTCATCCAG
CCTTCTGGCCATGCTCATTGAGGAGAACGGCGTGCGTCTGCGTCTCAACA
TTGTTGACACTCCTGGATACGGTGACCAGGTCAACAACGACAGATGGCCA
GACGGGTCTGGGCAAGTCCACTTTGATCAACACCATCTTTGCTTCGCACC
TTATCGACTCCAAGGGTCGCATGACCCCCAACGAACCTGTCCGCTCGACC
ACCGAGATTCAGACCGTTTCGCATAATGGCAGCCGCAGCCAATTCGTCTT
CCACCAATCCCGCGACGGTCTTCCCTCGCAGCCACGTCGGTTTTGACAGC
ATCACCTCCCAGATTGAGCGCAAGCTGTTGAAACGTGGATTTCAGTTCAA
TGTCATGTGCGTTGGACATCATTCCCTTTGCTGTTGTGGGTAGCGAACGT
ACCATCGTCGTCAATGGCCAGCAGGTTCGCGGCCGCCAGAACCGCTGGGG
TGTCATCAACGTGGAGGATGAGAACCACTGTGAATTTGTTTACCTGAGGA
ACTTCCTCACTCGCACTCATCTGCAGGACCTTATCGAGACGACCAGCCAG
ATCCACTATGAGACCTTCCGTGCCAAGCAGCTGCTGGCATTGAAGGAAAG
CAGTGCCGCTGGGAGCCACCCCGGTAGCAGCCGTCCCATCAGTCCCTCGG
CGGACAGAGAGCTCAGCCGCAACTCGCAACGCATGACTATGAACGGTTAT
TGATCTCAAGCCCATTGATATTGTTGTGCTGAAGAAGCTGTCGGACGTTG
TAAATGTTGTCCCCGTCATCGCCAAGGCCGATTCCCTTACCCTCGAAGAG
CGTCAAGCATTCAAGGAGAGAATCAAGGAAGAGTTTGCCTTCCACAACTT
GAAGATGTACCCCTACGACAATGACGAACTCGATGATGAAGAGCGTGCCG
TCAACGTCCAGATCAAGCTGGGACCCCATCGTGAAATATATCAAGGATCA
GCACTCCGCATACCTCCGCAAGGAGCTTACCGCTCAGCGTGACCGCTACA
TCCAGGATACCCGTATTCACTGCTGTCTGTTCTTCATCCAGCCTTCTGGC
CATGCTCATTGAGGAGAACGGCGTGCGTCTGCGTCTCAACATTGTTGACA
CTCCTGGATACGGTGACCAGGTCAACAACGACAGATGGCCAGACGGGTCT
GGGCAAGTCCACTTTGATCAACACCATCTTTGCTTCGCACCTTATCGACT
CCAAGGGTCGCATGACCCCCAACGAACCTGTCCGCTCGACCACCGAGATT
CAGACCGTTTCGCATAATGGCAGCCGCAGCCAATTCGTCTTCCACCAATC
CCGCGACGGTCTTCCCTCGCAGCCACGTCGGTTTTGACAGCATCACCTCC
CAGATTGAGCGCAAGCTGTTGAAACGTGGATTTCAGTTCAATGTCATGTG
CGTTGGACATCATTCCCTTTGCTGTTGTGGGTAGCGAACGTACCATCGTC
GTCAATGGCCAGCAGGTTCGCGGCCGCCAGAACCGCTGGGGTGTCATCAA
CGTGGAGGATGAGAACCACTGTGAATTTGTTTACCTGAGGAACTTCCTCA
CTCGCACTCATCTGCAGGACCTTATCGAGACGACCAGCCAGATCCACTAT
GAGACCTTCCGTGCCAAGCAGCTGCTGGCATTGAAGGAAAGCAGTGCCGC
TGGGAGCCACCCCGGTAGCAGCCGTCCCATCAGTCCCTCGGCGGACAGAG
AGCTCAGCCGCAACTCGCAACGCATGACTATGAACGGTTATTGATCTCAA
GCCCATTGATATTGTTGTGCTGAAGAAGCTGTCGGACGTTGTAAATGTTG
TCCCCGTCATCGCCAAGGCCGATTCCCTTACCCTCGAAGAGCGTCAAGCA
TTCAAGGAGAGAATCAAGGAAGAGTTTGCCTTCCACAACTTGAAGATGTA
CCCCTACGACAATGACGAACTCGATGATGAAGAGCGTGCCGTCAACGTCC
AGATCAAGCTGGGACCCCATCGTGAAATATATCAAGGATCAGCACTCCGC
ATACCTCCGCAAGGAGCTTACCGCTCAGCGTGACCGCTACATCCAGGATA
CCCGTATTCACTGCTGTCTGTTCTTCATCCAGCCTTCTGGCCATGCTCAT
TGAGGAGAACGGCGTGCGTCTGCGTCTCAACATTGTTGACACTCCTGGAT
ACGGTGACCAGGTCAACAACGACAGATGGCCAGACGGGTCTGGGCAAGTC
CACTTTGATCAACACCATCTTTGCTTCGCACCTTATCGACTCCAAGGGTC
GCATGACCCCCAACGAACCTGTCCGCTCGACCACCGAGATTCAGACCGTT
TCGCATAATGGCAGCCGCAGCCAATTCGTCTTCCACCAATCCCGCGACGG
TCTTCCCTCGCAGCCACGTCGGTTTTGACAGCATCACCTCCCAGATTGAG
CGCAAGCTGTTGAAACGTGGATTTCAGTTCAATGTCATGTGCGTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011805-T1.utr3p1 | KJC3_011805-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011805-T1.utr5p1 | KJC3_011805-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR030379 |
| DBxref | InterPro:IPR016491 |
| DBxref | PFAM:PF00735 |
| DBxref | PFAM:PF01926 |
| Product | Septin Spn2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1737342..1739011 - |
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