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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1741785..1742693- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011808-T1 ID=KJC3_011808-T1|Name=KJC3_011808-T1|organism=Aspergillus niger KJC3|type=mRNA|length=909bp|location=Sequence derived from alignment at ch8:1741785..1742693- (Aspergillus niger KJC3)
CCCCGCACCGCATATCTCAAATCTCGCAGTCTACAAGTACATCGGCACCT
ATAAAGTGCTAAGCTATATACACCATGAGCTCGTCTTTTGATCCGTCGCT
CTCGACAAGTGGCATGCGCCCGCCTCTCACGTCGGCCGATGCACCGTCCA
TGGCCGATTCACTCCCCAGTATCAACTTCGGATTTGAAGATCTCCGAAAT
CGCATGGCACAGTTCACTGCTCGCTTTGACGCTTTCATTGAGAGAGGCCG
CAAGCAGGTATTGGAGGAGAGGAACCAGTTCAAGATTGGACTGGCAGAGC
TACAGGGTAAGCTATCGCTTTATGGAGATGGCGCAAGAGCATCGGACTAA
CTCAGGTCCTGTAGAGGATGAACGCATGAAGCAAAGGGACATCGAGATCC
TGGATCTTAAATCGCAAACGCATCAGCAAACACTACAGAAGGAAGCCGCT
GAAGCAGCGGAAATGCACGCCGCCATCTCATCCGTGACCCTGGAGCGCGA
CTCCCGCCTCGCCAAGCGCGACCGCCTCAAGCAACAAATTGACGAGACCC
AAAAGGCGATTAACCAGAAGTTGGAGGCACAGAAGATGCACGCCAGATAT
CTGGATGCTCAGGCTCGGCTGAACGTGCCGGAATTGGACTTTTGGCAGGA
CTATCTGTGTTTACGCATTGAGGGAGCCGGACGAGAGGATCGACTGAAGT
TTGTTTACACCCATTTGCTCGAAAAAGACTGGGAAGCGGAAGCGTGGTTT
GAACTCGGAACAGGGAGCCGCGATTACGCAGTATTTCATACACGACCGAA
ACTCGATCGGGAGGCTCTCGAGCGTGAGCTCGATATCGTCAATGAGGATC
GCGATTTCGGTGCGTTCTTGAAAAGAATGCGGAAGTTGTTCGTCGATACC
ATGAAATAG back to topCoding sequence (CDS) from alignment at ch8:1741785..1742693- >KJC3_011808-T1 ID=KJC3_011808-T1|Name=KJC3_011808-T1|organism=Aspergillus niger KJC3|type=CDS|length=1554bp|location=Sequence derived from alignment at ch8:1741785..1742693- (Aspergillus niger KJC3)
AGGATGAACGCATGAAGCAAAGGGACATCGAGATCCTGGATCTTAAATCG
CAAACGCATCAGCAAACACTACAGAAGGAAGCCGCTGAAGCAGCGGAAAT
GCACGCCGCCATCTCATCCGTGACCCTGGAGCGCGACTCCCGCCTCGCCA
AGCGCGACCGCCTCAAGCAACAAATTGACGAGACCCAAAAGGCGATTAAC
CAGAAGTTGGAGGCACAGAAGATGCACGCCAGATATCTGGATGCTCAGGC
TCGGCTGAACGTGCCGGAATTGGACTTTTGGCAGGACTATCTGTGTTTAC
GCATTGAGGGAGCCGGACGAGAGGATCGACTGAAGTTTGTTTACACCCAT
TTGCTCGAAAAAGACTGGGAAGCGGAAGCGTGGTTTGAACTCGGAACAGG
GAGCCGCGATTACGCAGTATTTCATACACGACCGAAACTCGATCGGGAGG
CTCTCGAGCGTGAGCTCGATATCGTCAATGAGGATCGCGATTTCGGTGCG
TTCTTGAAAAGAATGCGGAAGTTGTTCGTCGATACCATGAAATAGATGAG
CTCGTCTTTTGATCCGTCGCTCTCGACAAGTGGCATGCGCCCGCCTCTCA
CGTCGGCCGATGCACCGTCCATGGCCGATTCACTCCCCAGTATCAACTTC
GGATTTGAAGATCTCCGAAATCGCATGGCACAGTTCACTGCTCGCTTTGA
CGCTTTCATTGAGAGAGGCCGCAAGCAGGTATTGGAGGAGAGGAACCAGT
TCAAGATTGGACTGGCAGAGCTACAGGAGGATGAACGCATGAAGCAAAGG
GACATCGAGATCCTGGATCTTAAATCGCAAACGCATCAGCAAACACTACA
GAAGGAAGCCGCTGAAGCAGCGGAAATGCACGCCGCCATCTCATCCGTGA
CCCTGGAGCGCGACTCCCGCCTCGCCAAGCGCGACCGCCTCAAGCAACAA
ATTGACGAGACCCAAAAGGCGATTAACCAGAAGTTGGAGGCACAGAAGAT
GCACGCCAGATATCTGGATGCTCAGGCTCGGCTGAACGTGCCGGAATTGG
ACTTTTGGCAGGACTATCTGTGTTTACGCATTGAGGGAGCCGGACGAGAG
GATCGACTGAAGTTTGTTTACACCCATTTGCTCGAAAAAGACTGGGAAGC
GGAAGCGTGGTTTGAACTCGGAACAGGGAGCCGCGATTACGCAGTATTTC
ATACACGACCGAAACTCGATCGGGAGGCTCTCGAGCGTGAGCTCGATATC
GTCAATGAGGATCGCGATTTCGGTGCGTTCTTGAAAAGAATGCGGAAGTT
GTTCGTCGATACCATGAAATAGATGAGCTCGTCTTTTGATCCGTCGCTCT
CGACAAGTGGCATGCGCCCGCCTCTCACGTCGGCCGATGCACCGTCCATG
GCCGATTCACTCCCCAGTATCAACTTCGGATTTGAAGATCTCCGAAATCG
CATGGCACAGTTCACTGCTCGCTTTGACGCTTTCATTGAGAGAGGCCGCA
AGCAGGTATTGGAGGAGAGGAACCAGTTCAAGATTGGACTGGCAGAGCTA
CAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011808-T1.utr5p1 | KJC3_011808-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013255 |
| DBxref | PFAM:PF08234 |
| Product | kinetochore-associated Ndc80 complex subunit spc25 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1741785..1742693 - |
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