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KJC3_011810-T1, KJC3_011810-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011810-T1
Unique NameKJC3_011810-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1746472..1747294+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011810-T1 ID=KJC3_011810-T1|Name=KJC3_011810-T1|organism=Aspergillus niger KJC3|type=mRNA|length=823bp|location=Sequence derived from alignment at ch8:1746472..1747294+ (Aspergillus niger KJC3)
TGGGAAGTATAAGAACGAGACGAGTTTCATTCATTCCTTGAGCACTCTTT
CCCATTCTCTCTATCTCGTGTATATGCCGACTCCCAGGAACCAATAATCC
TGCTGTTGCTGATATTGCTGCTCAACTCGAAACGCCCATCGATCGACATT
CCCCATCCGTCTCCACCCCTCCTCTCCTTGCTTCAGCCCCGCCGCCATCG
TCATTCTATCTTCTTTATTTACTTATTTGTTCATCCACACACCACACTAC
CCACCTCCTCTCTCTTTCTCTCTCTCTCTCAAGTTCACGTAGCATACACC
GCCCGCTAACACCATGTCCGATCACCAATACAAGTTCAACGTCAGCATGA
GCTGTGGCGGTTGCTCCGGTGCCGTGGAACGAGTCCTGAAGAAGCTCGAG
GGTACATTTTTTCTCTCCTTTCTTTTCTCCCCATTATTTCCCCCCTTCTT
TCCAGAGAATCGTAAAAAAAAAAAAAAAAAAAGCAATAAGCAGATGCACT
GAGCCGCTTCGCTAACTTTCTTTCTTCTTCTTCCCACAGGTGTCAAGTCC
TTCGATGTCAACCTGGAATCCCAAACCGCCAACGTTGTCACCGAACCCTC
CGTGCCCTACGATACCGTGCTGGCTACGATCAAGAAGACTGGAAAGACGG
TCAACAGTGGAGAGGCTGATGGCCAGACCATGAGTGTTTGAGGGGGAAAA
AGAAGGAAGAAACAAAGGAAAATCAGAAGAATAGTATGGAGCCTAGGTTG
GCCTCGGGGAAGTGACGAATCTTTCGTCCGAAGGGGGCAGTGTTATGCAT
GCATATAATGAAAGAATGGGAAG
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Coding sequence (CDS) from alignment at ch8:1746472..1747294+

>KJC3_011810-T1 ID=KJC3_011810-T1|Name=KJC3_011810-T1|organism=Aspergillus niger KJC3|type=CDS|length=480bp|location=Sequence derived from alignment at ch8:1746472..1747294+ (Aspergillus niger KJC3)
ATGTCCGATCACCAATACAAGTTCAACGTCAGCATGAGCTGTGGCGGTTG
CTCCGGTGCCGTGGAACGAGTCCTGAAGAAGCTCGAGGGTGTCAAGTCCT
TCGATGTCAACCTGGAATCCCAAACCGCCAACGTTGTCACCGAACCCTCC
GTGCCCTACGATACCGTGCTGGCTACGATCAAGAAGACTGGAAAGACGGT
CAACAGTGGAGAGGCTGATGGCCAGACCATGAGTGTTTGAATGTCCGATC
ACCAATACAAGTTCAACGTCAGCATGAGCTGTGGCGGTTGCTCCGGTGCC
GTGGAACGAGTCCTGAAGAAGCTCGAGGGTGTCAAGTCCTTCGATGTCAA
CCTGGAATCCCAAACCGCCAACGTTGTCACCGAACCCTCCGTGCCCTACG
ATACCGTGCTGGCTACGATCAAGAAGACTGGAAAGACGGTCAACAGTGGA
GAGGCTGATGGCCAGACCATGAGTGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011810KJC3_011810Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011810-T1.utr5p1KJC3_011810-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011810-T1.exon1KJC3_011810-T1.exon1Aspergillus niger KJC3exon
KJC3_011810-T1.exon2KJC3_011810-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011810-T1.cdsKJC3_011810-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011810-T1.utr3p1KJC3_011810-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011810-T1KJC3_011810-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036163
DBxrefInterPro:IPR017969
DBxrefInterPro:IPR006121
DBxrefPFAM:PF00403
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1746472..1747294 +
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