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KJC3_011824-T1, KJC3_011824-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011824-T1
Unique NameKJC3_011824-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1779321..1780468-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011824-T1 ID=KJC3_011824-T1|Name=KJC3_011824-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1148bp|location=Sequence derived from alignment at ch8:1779321..1780468- (Aspergillus niger KJC3)
ATGTCGCTTTTCGGTTCCGTCGGCGCCGCGACGACCTCAGCTGGTCAGAC
CAACACCACAGGTGATATCTCCAAGGATGTCGCCCTGAACCAACCTCCCG
AGGACAGTATTTCGGACCTCCGCTTCTCCCCGGCTAGTGAACACCTCGCT
GTAGCCTCATGGGACAAGAAGGTTCGCATTTACGAGATCAATGAGCAGGG
CCAGAGCGAAGGTAAAGCTCTGTTCGAGCACGAGGCCCCCGTTCTGAGCT
GTTGCTGGTCGCCGGTGAGCTCGCCCTCATTTCCTTGTCGCAGTATCTAC
AGTTAACTGATATGGACTCTGCTGCTACCTAGGATGGTACGAAAGTGGTC
GGAGCTGGCGCCGACAAAGCCGCTCGGATGCTCGACCTTGCAACCAATGC
GACCACTCAAGTCGCCGCTCACGATGCGCCCATCAAATGCTGCCACATGA
TCCCAAACCCGGCTGGAGGGAGCCCGCTACTCGTAACCGGTTCTTGGGAC
AAGACCATCAAGTACTGGGACTTGCGACAGTCAAACCCCATCGCCTCGGT
GGAGTGCCAGGAGCGTGTTTACACCATGGATGTCAAGGACAAACTCCTCG
TGGTCGGCACCGCAGACCGCTATATCAACGTCATCAACCTCGACCAACCC
ACCAAATTCTACAAAACCATGCAGTCCCCTCTCAAGTGGCAGACGCGGGT
AGTCAGCTGCTTTTCGACTGCCACCGGGTTCGCCGTCGGCAGTGTCGAGG
GCCGCTGTGCGATCCAGTATGTCGAGGACAAGGACTCCTCCAACAACTTC
AGTTTCAAGTGCCACCGTGAGACTCCTCAGCGCGATGTCAACAACATCTA
CTCCGTCAACGCCATCTCCTTCCACCCTGTCCACGGCACCTTCAGCACCG
CCGGCAGTGACGGCACCTTCCACTTCTGGGACAAGGACGCCAAGCATCGT
CTAAAGGGATATCCCTCCGTGGGCGGTACCATCTCCAGCACTGCCTTCAA
CCGCAACGGCAACATCTTCGCCTACGCTGTCAGTTACGACTGGAGCAAGG
GGTACTCCGCCAACACCCAGCAACTGCCCAACAAGGTTATGCTGCACCCT
GTCAGCCAAGAGGAAGTGAAGCCTAGACCAAACAACCGGAAGAGGTAA
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Coding sequence (CDS) from alignment at ch8:1779321..1780468-

>KJC3_011824-T1 ID=KJC3_011824-T1|Name=KJC3_011824-T1|organism=Aspergillus niger KJC3|type=CDS|length=2160bp|location=Sequence derived from alignment at ch8:1779321..1780468- (Aspergillus niger KJC3)
GATGGTACGAAAGTGGTCGGAGCTGGCGCCGACAAAGCCGCTCGGATGCT
CGACCTTGCAACCAATGCGACCACTCAAGTCGCCGCTCACGATGCGCCCA
TCAAATGCTGCCACATGATCCCAAACCCGGCTGGAGGGAGCCCGCTACTC
GTAACCGGTTCTTGGGACAAGACCATCAAGTACTGGGACTTGCGACAGTC
AAACCCCATCGCCTCGGTGGAGTGCCAGGAGCGTGTTTACACCATGGATG
TCAAGGACAAACTCCTCGTGGTCGGCACCGCAGACCGCTATATCAACGTC
ATCAACCTCGACCAACCCACCAAATTCTACAAAACCATGCAGTCCCCTCT
CAAGTGGCAGACGCGGGTAGTCAGCTGCTTTTCGACTGCCACCGGGTTCG
CCGTCGGCAGTGTCGAGGGCCGCTGTGCGATCCAGTATGTCGAGGACAAG
GACTCCTCCAACAACTTCAGTTTCAAGTGCCACCGTGAGACTCCTCAGCG
CGATGTCAACAACATCTACTCCGTCAACGCCATCTCCTTCCACCCTGTCC
ACGGCACCTTCAGCACCGCCGGCAGTGACGGCACCTTCCACTTCTGGGAC
AAGGACGCCAAGCATCGTCTAAAGGGATATCCCTCCGTGGGCGGTACCAT
CTCCAGCACTGCCTTCAACCGCAACGGCAACATCTTCGCCTACGCTGTCA
GTTACGACTGGAGCAAGGGGTACTCCGCCAACACCCAGCAACTGCCCAAC
AAGGTTATGCTGCACCCTGTCAGCCAAGAGGAAGTGAAGCCTAGACCAAA
CAACCGGAAGAGGTAAATGTCGCTTTTCGGTTCCGTCGGCGCCGCGACGA
CCTCAGCTGGTCAGACCAACACCACAGGTGATATCTCCAAGGATGTCGCC
CTGAACCAACCTCCCGAGGACAGTATTTCGGACCTCCGCTTCTCCCCGGC
TAGTGAACACCTCGCTGTAGCCTCATGGGACAAGAAGGTTCGCATTTACG
AGATCAATGAGCAGGGCCAGAGCGAAGGTAAAGCTCTGTTCGAGCACGAG
GCCCCCGTTCTGAGCTGTTGCTGGTCGCCGGATGGTACGAAAGTGGTCGG
AGCTGGCGCCGACAAAGCCGCTCGGATGCTCGACCTTGCAACCAATGCGA
CCACTCAAGTCGCCGCTCACGATGCGCCCATCAAATGCTGCCACATGATC
CCAAACCCGGCTGGAGGGAGCCCGCTACTCGTAACCGGTTCTTGGGACAA
GACCATCAAGTACTGGGACTTGCGACAGTCAAACCCCATCGCCTCGGTGG
AGTGCCAGGAGCGTGTTTACACCATGGATGTCAAGGACAAACTCCTCGTG
GTCGGCACCGCAGACCGCTATATCAACGTCATCAACCTCGACCAACCCAC
CAAATTCTACAAAACCATGCAGTCCCCTCTCAAGTGGCAGACGCGGGTAG
TCAGCTGCTTTTCGACTGCCACCGGGTTCGCCGTCGGCAGTGTCGAGGGC
CGCTGTGCGATCCAGTATGTCGAGGACAAGGACTCCTCCAACAACTTCAG
TTTCAAGTGCCACCGTGAGACTCCTCAGCGCGATGTCAACAACATCTACT
CCGTCAACGCCATCTCCTTCCACCCTGTCCACGGCACCTTCAGCACCGCC
GGCAGTGACGGCACCTTCCACTTCTGGGACAAGGACGCCAAGCATCGTCT
AAAGGGATATCCCTCCGTGGGCGGTACCATCTCCAGCACTGCCTTCAACC
GCAACGGCAACATCTTCGCCTACGCTGTCAGTTACGACTGGAGCAAGGGG
TACTCCGCCAACACCCAGCAACTGCCCAACAAGGTTATGCTGCACCCTGT
CAGCCAAGAGGAAGTGAAGCCTAGACCAAACAACCGGAAGAGGTAAATGT
CGCTTTTCGGTTCCGTCGGCGCCGCGACGACCTCAGCTGGTCAGACCAAC
ACCACAGGTGATATCTCCAAGGATGTCGCCCTGAACCAACCTCCCGAGGA
CAGTATTTCGGACCTCCGCTTCTCCCCGGCTAGTGAACACCTCGCTGTAG
CCTCATGGGACAAGAAGGTTCGCATTTACGAGATCAATGAGCAGGGCCAG
AGCGAAGGTAAAGCTCTGTTCGAGCACGAGGCCCCCGTTCTGAGCTGTTG
CTGGTCGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GLE2KJC3_011824Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011824-T1KJC3_011824-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011824-T1.cdsKJC3_011824-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011824-T1.exon2KJC3_011824-T1.exon2Aspergillus niger KJC3exon
KJC3_011824-T1.exon1KJC3_011824-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
ProductRNA export factor gle2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1779321..1780468 -
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