|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1823604..1826356- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011840-T1 ID=KJC3_011840-T1|Name=KJC3_011840-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2753bp|location=Sequence derived from alignment at ch8:1823604..1826356- (Aspergillus niger KJC3)
TTCCTCCTCACTTCCTCCTCAACTTTCTCTCTGTTAACTCCGTTGTGGAT
TGATTTCCCCTTCCCCCTCCCTCTCTTCAATCCTCTCGGGTCTCTCACTG
AACTATTCTGAATTGCCTGATCGCCAGATTAGTCAGTGTTCCCGCACACG
TGTGTTCCGTTCATCATGGCGACCTTCTTCCAGAGTGTGTATGTGCCTTC
CCCTCCTCTTCCCCTAAATCATGCATCCCGTCCCTGTTGGACCCTTCACT
CGCATGCGCTCTCTCTGGGTGGACAGTGCTGCATCATGCCTGGGCGCACC
AAGGAATGATGCCCCCTGAATTCAGTGGCCACGTCCACCAGTCTGTGTCC
TTTGTTTCAGCGCTGCGGCTTCATCTCCTGACGCTCTCTCCTTTTCCCTT
CTGCCCCCCACATCTCCGTTTGGACACCAGACAGAACTAACTTGCGACTT
GTTCCCCCTTCCCAGCCGCCAAGGGTTTGGCAGAGGCAATAACAACAAGA
ACAACAACAACAATAACAATAACAATCCCGCAAAGATGAACAATGGAAGT
CCGGCTCCGTCGCCGGCGTCTCTGATGCCTCCCGCCGGCCATGTGCCCAA
CTCGCCGTCCCTCACCTCGAGTCTCTCCGTGGACACCTCCGCCACCTACG
ACCCCGATGCCCCCAAGTACTTCTTCCAGGAGAAATACGCACCCCTCAAT
GTAAAGGGCAACTTCTTGACCTTGTGTGCCTGTCCCAAGAACGTGGAGCT
GGGTGAATGGCTGGCCCATCAGAGTAAGCGGACTTGCTGCCTCCTCCGCT
CGGAGAACCCCCCGCGCTGATCGCTTACTCCACACAGTCGTTGAACAATA
TCGCTTGCTCCATGGCATGCTCCAGGTTATCCAGGAGGTCAATAGCCTTA
CAGGACTGCCGATCTGCAACGAGAACACCTGCCCCACCATGTCGGCTGGT
CGGTAAGTTGCTTTTTCTCCCGCGCTTAGAATTCGGAAATCGGTCTAACA
TGGACATTGCCGGATAGCTTGACCTACACCTGGCTGGTTGACGGTCGTGC
CGCCAAGATCTCGGCCCCCAAGTTCATCAACCGTGTTGAGAAATGGATTG
TCAGCAAGATTCACGACCCGGTCATGTTCCCCACGGAAAAGGTTACCGGT
GTACCAGACACCTTTGCAGTCAATGAAGCGGGCGGGCCCAGCGCTACTTC
CGGGGAGGAGTGGATCGGCAAGTCCAGCGGCTTCCCGCAGACGTTCTACA
AGGACTGCCAGGGCATCATGAAGCAGATGTTCCGATGCTACGCCCACTTG
TACCACGCGCACTGGCTGAACCCCTTCTGGCACATCAACAAGCATGACAT
TCTCAACATGTGCTTTGTCCACTTTGTCACGGTGGCCAAATACTACAAGC
TCGTGTCTGACAAGGAAATGGAGCCTATGCAACCCCTTATCGACCTGTTC
ATCAAGCAGCAGCGGATCCCTCCGGAGGCGCTGGCAGGTGGCCACTGGGG
CCAGCAAGCCTCTAGCTGAGCTAGGGCGCAGCAGAATTCCCATTCTTCCT
TCCTCAAGCAAGAAAGTGGTCCGACCTGGCGTTGGAACCCTTTGATCGGA
TTAGACGAACCGACTTGATCCTATGATCGCGGTTTCATGGTGTCTTGACT
TTTGCAGGACGCCTCGTGGATTACGTGACACAGAGTTGGCGTTAAGCATT
TAGCATGCGGTGTGAAATATGTTCTTCCTGTGATTTCCTGCATATCCAGT
CGTGGGACCCCCCACCGACTACGCGATTCTTGTAGCCTAGATTAACCTTG
TGCATCCTGGCTGGACGAGAGCATTTTGAGATTATTTACCTGGAACTAGC
CTGACGTGGAGATGACACTGATCAGCCAAATTGAGATTATGAACAATTAG
CATGAAGATAACGTAGGGCCCCTCTTCCGGGAGGACTAGATAGTTCAACT
AGCATGGAGACAATTAGCGGCGTGACGTCTCTCATGCTTTGACTGTATTC
AGTAGAGAGGGCTGAACGGACAGCAGGGATTGAATAGCCTTCAAGTTGCA
ACATTGCGACACTCTTGGCAGTAGGTGAGGTAGTTGGTAGCTGCACATAT
AGAAGATCCCGTATGCGACAGATGGATATCTTGCAAATATTGCGTTGTAC
CTTTCCTTGTCTCGAATTCATCACCCAGACGGAGGTTCATCACTAGAGAT
AGACTCCCTCCTGATCCTGATCGTGATCTTGATTCCGGTCCTCATTCCCC
GCAGCGGGGTTCCGCACCTCCTCCGTCCCTTCTACCGTTCCATTCCCATT
TCCATTGGCATTCGCTTCCCCATTTGCTTTCTCCTTCTCCGGATCGTCCA
GCTCAATCCATTTCTGTCCCCTGTTCTCCACCTCTGTCTTCAGTAGCTCG
ATCCTCTCCAGCATCGACACCGCGACGTCCTCGTTCTCCTTGATATAGAC
CTCGAGTTCTTGCTTTTCGGCTTCCGTGTCACATGACTCGTTGATAAATG
TCCTCAGTTCCTGGTTGGAGCGGTGGAGGTGTGCCATGGAGTTGCGGATC
TCGGAGACTTTCGCGTAGAGCACAGGGAGGGGAAGCTCTTTGATGGCTTC
GGCGAAGGCGGCGGGGCTGATGGGAAGGGATTCGGCGGACATGGTTGCTT
GCTTGCGTTGAGGTTTGATGCGTATATGTAAGATGAGATGAGGGGCTTGA
TAGATAGAGGTAAGTAGAAGATAGATGAAGATGGTTCTATAGCAATCCAG
TAG back to topCoding sequence (CDS) from alignment at ch8:1823604..1826356- >KJC3_011840-T1 ID=KJC3_011840-T1|Name=KJC3_011840-T1|organism=Aspergillus niger KJC3|type=CDS|length=3792bp|location=Sequence derived from alignment at ch8:1823604..1826356- (Aspergillus niger KJC3)
CTTGACCTACACCTGGCTGGTTGACGGTCGTGCCGCCAAGATCTCGGCCC
CCAAGTTCATCAACCGTGTTGAGAAATGGATTGTCAGCAAGATTCACGAC
CCGGTCATGTTCCCCACGGAAAAGGTTACCGGTGTACCAGACACCTTTGC
AGTCAATGAAGCGGGCGGGCCCAGCGCTACTTCCGGGGAGGAGTGGATCG
GCAAGTCCAGCGGCTTCCCGCAGACGTTCTACAAGGACTGCCAGGGCATC
ATGAAGCAGATGTTCCGATGCTACGCCCACTTGTACCACGCGCACTGGCT
GAACCCCTTCTGGCACATCAACAAGCATGACATTCTCAACATGTGCTTTG
TCCACTTTGTCACGGTGGCCAAATACTACAAGCTCGTGTCTGACAAGGAA
ATGGAGCCTATGCAACCCCTTATCGACCTGTTCATCAAGCAGCAGCGGAT
CCCTCCGGAGGCGCTGGCAGGTGGCCACTGGGGCCAGCAAGCCTCTAGCT
GATCGTTGAACAATATCGCTTGCTCCATGGCATGCTCCAGGTTATCCAGG
AGGTCAATAGCCTTACAGGACTGCCGATCTGCAACGAGAACACCTGCCCC
ACCATGTCGGCTGGTCGCCGCCAAGGGTTTGGCAGAGGCAATAACAACAA
GAACAACAACAACAATAACAATAACAATCCCGCAAAGATGAACAATGGAA
GTCCGGCTCCGTCGCCGGCGTCTCTGATGCCTCCCGCCGGCCATGTGCCC
AACTCGCCGTCCCTCACCTCGAGTCTCTCCGTGGACACCTCCGCCACCTA
CGACCCCGATGCCCCCAAGTACTTCTTCCAGGAGAAATACGCACCCCTCA
ATGTAAAGGGCAACTTCTTGACCTTGTGTGCCTGTCCCAAGAACGTGGAG
CTGGGTGAATGGCTGGCCCATCAGAATGGCGACCTTCTTCCAGAGTGTCT
TGACCTACACCTGGCTGGTTGACGGTCGTGCCGCCAAGATCTCGGCCCCC
AAGTTCATCAACCGTGTTGAGAAATGGATTGTCAGCAAGATTCACGACCC
GGTCATGTTCCCCACGGAAAAGGTTACCGGTGTACCAGACACCTTTGCAG
TCAATGAAGCGGGCGGGCCCAGCGCTACTTCCGGGGAGGAGTGGATCGGC
AAGTCCAGCGGCTTCCCGCAGACGTTCTACAAGGACTGCCAGGGCATCAT
GAAGCAGATGTTCCGATGCTACGCCCACTTGTACCACGCGCACTGGCTGA
ACCCCTTCTGGCACATCAACAAGCATGACATTCTCAACATGTGCTTTGTC
CACTTTGTCACGGTGGCCAAATACTACAAGCTCGTGTCTGACAAGGAAAT
GGAGCCTATGCAACCCCTTATCGACCTGTTCATCAAGCAGCAGCGGATCC
CTCCGGAGGCGCTGGCAGGTGGCCACTGGGGCCAGCAAGCCTCTAGCTGA
TCGTTGAACAATATCGCTTGCTCCATGGCATGCTCCAGGTTATCCAGGAG
GTCAATAGCCTTACAGGACTGCCGATCTGCAACGAGAACACCTGCCCCAC
CATGTCGGCTGGTCGCCGCCAAGGGTTTGGCAGAGGCAATAACAACAAGA
ACAACAACAACAATAACAATAACAATCCCGCAAAGATGAACAATGGAAGT
CCGGCTCCGTCGCCGGCGTCTCTGATGCCTCCCGCCGGCCATGTGCCCAA
CTCGCCGTCCCTCACCTCGAGTCTCTCCGTGGACACCTCCGCCACCTACG
ACCCCGATGCCCCCAAGTACTTCTTCCAGGAGAAATACGCACCCCTCAAT
GTAAAGGGCAACTTCTTGACCTTGTGTGCCTGTCCCAAGAACGTGGAGCT
GGGTGAATGGCTGGCCCATCAGAATGGCGACCTTCTTCCAGAGTGTCTTG
ACCTACACCTGGCTGGTTGACGGTCGTGCCGCCAAGATCTCGGCCCCCAA
GTTCATCAACCGTGTTGAGAAATGGATTGTCAGCAAGATTCACGACCCGG
TCATGTTCCCCACGGAAAAGGTTACCGGTGTACCAGACACCTTTGCAGTC
AATGAAGCGGGCGGGCCCAGCGCTACTTCCGGGGAGGAGTGGATCGGCAA
GTCCAGCGGCTTCCCGCAGACGTTCTACAAGGACTGCCAGGGCATCATGA
AGCAGATGTTCCGATGCTACGCCCACTTGTACCACGCGCACTGGCTGAAC
CCCTTCTGGCACATCAACAAGCATGACATTCTCAACATGTGCTTTGTCCA
CTTTGTCACGGTGGCCAAATACTACAAGCTCGTGTCTGACAAGGAAATGG
AGCCTATGCAACCCCTTATCGACCTGTTCATCAAGCAGCAGCGGATCCCT
CCGGAGGCGCTGGCAGGTGGCCACTGGGGCCAGCAAGCCTCTAGCTGATC
GTTGAACAATATCGCTTGCTCCATGGCATGCTCCAGGTTATCCAGGAGGT
CAATAGCCTTACAGGACTGCCGATCTGCAACGAGAACACCTGCCCCACCA
TGTCGGCTGGTCGCCGCCAAGGGTTTGGCAGAGGCAATAACAACAAGAAC
AACAACAACAATAACAATAACAATCCCGCAAAGATGAACAATGGAAGTCC
GGCTCCGTCGCCGGCGTCTCTGATGCCTCCCGCCGGCCATGTGCCCAACT
CGCCGTCCCTCACCTCGAGTCTCTCCGTGGACACCTCCGCCACCTACGAC
CCCGATGCCCCCAAGTACTTCTTCCAGGAGAAATACGCACCCCTCAATGT
AAAGGGCAACTTCTTGACCTTGTGTGCCTGTCCCAAGAACGTGGAGCTGG
GTGAATGGCTGGCCCATCAGAATGGCGACCTTCTTCCAGAGTGTCTTGAC
CTACACCTGGCTGGTTGACGGTCGTGCCGCCAAGATCTCGGCCCCCAAGT
TCATCAACCGTGTTGAGAAATGGATTGTCAGCAAGATTCACGACCCGGTC
ATGTTCCCCACGGAAAAGGTTACCGGTGTACCAGACACCTTTGCAGTCAA
TGAAGCGGGCGGGCCCAGCGCTACTTCCGGGGAGGAGTGGATCGGCAAGT
CCAGCGGCTTCCCGCAGACGTTCTACAAGGACTGCCAGGGCATCATGAAG
CAGATGTTCCGATGCTACGCCCACTTGTACCACGCGCACTGGCTGAACCC
CTTCTGGCACATCAACAAGCATGACATTCTCAACATGTGCTTTGTCCACT
TTGTCACGGTGGCCAAATACTACAAGCTCGTGTCTGACAAGGAAATGGAG
CCTATGCAACCCCTTATCGACCTGTTCATCAAGCAGCAGCGGATCCCTCC
GGAGGCGCTGGCAGGTGGCCACTGGGGCCAGCAAGCCTCTAGCTGATCGT
TGAACAATATCGCTTGCTCCATGGCATGCTCCAGGTTATCCAGGAGGTCA
ATAGCCTTACAGGACTGCCGATCTGCAACGAGAACACCTGCCCCACCATG
TCGGCTGGTCGCCGCCAAGGGTTTGGCAGAGGCAATAACAACAAGAACAA
CAACAACAATAACAATAACAATCCCGCAAAGATGAACAATGGAAGTCCGG
CTCCGTCGCCGGCGTCTCTGATGCCTCCCGCCGGCCATGTGCCCAACTCG
CCGTCCCTCACCTCGAGTCTCTCCGTGGACACCTCCGCCACCTACGACCC
CGATGCCCCCAAGTACTTCTTCCAGGAGAAATACGCACCCCTCAATGTAA
AGGGCAACTTCTTGACCTTGTGTGCCTGTCCCAAGAACGTGGAGCTGGGT
GAATGGCTGGCCCATCAGAATGGCGACCTTCTTCCAGAGTGT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011840-T1.utr3p1 | KJC3_011840-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011840-T1.utr5p1 | KJC3_011840-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036703 |
| DBxref | InterPro:IPR005301 |
| DBxref | PFAM:PF03637 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1823604..1826356 - |
|
