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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1869562..1872026- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011860-T1 ID=KJC3_011860-T1|Name=KJC3_011860-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2465bp|location=Sequence derived from alignment at ch8:1869562..1872026- (Aspergillus niger KJC3)
GTGATTGTTCTGGCAACCTTCAATCGAGATATGAGCTGAACGAGCTGTGA
GTCTGAATGTTACCTTGTCCGCACCATCTCCCGCGTTCCCGCGTCTGCGC
TGGATTGCCGTCCCATAGCCCGCAGCACAGGCTCCGCTTTGGGCGACGGA
GAGAAGGACACTACGATACAAGATCCTTTGTCGACAATGCGCCGCGATCG
AATACGTCGAGTCAGCTGGATGTTCTAACCAATGGTCTGAGGCCTTCCAG
CGTCTACTGCACTGTTAACCCGGAAATGAAGCCCCAGCGCCTCTTCCATA
CAACTACCTTTGGCCGATCTGCAGGGAATCGTGTATTTCACAATCAGCCC
TCGATTACCAAAAGGGAGTTCTCACTTCTGTCACCCGGAGCCGGTTCTCG
CAATGCAACTTTACTATCGATCATCAACAAACACACCACACTTTCCGTCG
TGCAGAAACGCAATTTGCGCACCCCACCTACCCTCGCGAGCTTCAGCGAT
GTGAAGCCGCTCTTGACATTGCGGTTTGGAAAAGAAACCAAAGCCTTGGA
TTTGGCTATTAGATCCGGATCATATATGTGCAGTGGAGATGATATTCGAA
AATGGAGATTTGCGCAAAGAGAGTTGTTTCAGGCGAAGTACGAGGAGAGA
GAGGTGCAGGAAGAGTTGGTGCCTTACCCTCTAGACTCAAAAGATAAGGA
GCTGCTGGAGGCCATTCAAACGGACAGCCTGGGAGCGTTCCGTGAGGCCT
GGAATGGCCTAACCCCGATGGAAATGGAGATCCACTGGGGGCGATTGTCG
CTGTGGCTATTACGGAATTCTCCTGAGCTGGCCTTGGAATTCCTCCTAGT
CACTTGTCAGGCTTCTGTTAAACCAGTATTTGCCATGATTGCGGACTGCC
TGATCTATTTGGACACTCTTCATTCTGGTGAGATGCAGCGGTGGAGGAAA
AATTCCCACAACTATCAGTCTGTCATACGTATCTGCTTGGATCCCATGCA
GTGGCCTGTCTCCTATGTGCCGCAGAAGGGTGTGCGCTTCTACATAAAGA
AGGCTGACCGTAGCGCAGTTTATGAGGCATGGAATCTTGTGGAGACTCGA
AAGCACAGATTGAAGGGCGAGACCTACCTTGGTTTCATGGGCCGCTTCAC
GGAATTCAAAGACGTTGACAACGCACTCCTGGCACTGCGCCGGGCTGGGC
GGCAGTTTTGGAGATTACATCAAAGTCCTATGGAGATAGCAGTTTCACGC
CATTGCAGCAAGCTCTTGGTTCTCGACTCGGTTGTGGATGGCCCGGATGG
ACGCAATTTCCGCATTCTTCCCGAACTCCTCAGTATGGGGGTGCAGCCTG
ACCGAGACATGATGAACGTGGTGCTCTCTAACGCCTTCAAGACAGGGGAT
CCTCAACTCGGGCTTGATGTATTGCGCCATATGAAGGCTCAAGGCTTCCA
GCTCGATTCGTACACTTATCTGACTCTACTTAGCGATGCTGTCGCTCGTC
AAGACAGGGAGCGAATGACACACTTGATGGAGGAACTTGAAAGCCAGCCA
GAGCTCAAGAAGAACCCCTATATTGCGAGCAAGCTCTTCCACTCTCACTT
CGTTTTCAACGTCAAGCATCTCGATGGTGCTACAGACCGCCGGGAGATTT
TCTACTCACTGCTGCGCATGTATTGTGAGCTGCATGACATAACGCCCCTA
AAAGAGCTCTCGATTGTCCCTCGTCAGTACGATCTTCCAACAACTGGCGA
AAAGACCCCACCGTCCGTCATTGCCTTGTATCTCGTGATTGCGACTTGGC
TCCGGTGTCAAGCTCACGTGGGCAGCGTCGAACGTGTTTATACCAGGTTC
CGGGAATTGGTGTTGCAAGGCCACAAAGACGTAGCCCCTCTAGCTGCGAC
CGACCATACCTACAATGAGTTCATGCTTGCGTATCGTAACAATCCACACG
GGTTACGGCCCGCTGTGCGCGTTGTTGAAGACATGTTACAGTCTGCCACT
GAGGTTGGCGCCAAAACTGGCAATTCTGAGTCAACTTTCACGCAGACACA
GCCAACGGTCTTGACTTGGACGCTGCTGTTGAGTGCTTTCATCTATAACA
ACCAGCCACTCGCGGCTGAGAAGGTGAGAGAGATGATGGCTAAGCATGGT
GTTGTATACAGCATGACTACTTGGAATGTCATCATCAGCGGGTTTGCGAG
CCAGCAAAATGCATCTGCCATCGCGCAGTCCATCAAAGATCTCGAAGATC
AAGGCCTTTCCATTGATGCTTATACGATGAAGGGCCTGCGCTACCTCCGA
GACCCGGAGCAGCTCTGGATTGCGGTGGAGCAGTTGGACCTGAAATCTGC
ATCTCACTTGAGGAGGGATGCTTTCAACCCGAACCCCGAATCTCCCCACC
TGGACGAAGCGGAAACTGAGCAGCTGCTCGATCGAGGCCTGCAGCGTCTA
AAGGCCAACGCATGA back to topCoding sequence (CDS) from alignment at ch8:1869562..1872026- >KJC3_011860-T1 ID=KJC3_011860-T1|Name=KJC3_011860-T1|organism=Aspergillus niger KJC3|type=CDS|length=4374bp|location=Sequence derived from alignment at ch8:1869562..1872026- (Aspergillus niger KJC3)
CCCCAGCGCCTCTTCCATACAACTACCTTTGGCCGATCTGCAGGGAATCG
TGTATTTCACAATCAGCCCTCGATTACCAAAAGGGAGTTCTCACTTCTGT
CACCCGGAGCCGGTTCTCGCAATGCAACTTTACTATCGATCATCAACAAA
CACACCACACTTTCCGTCGTGCAGAAACGCAATTTGCGCACCCCACCTAC
CCTCGCGAGCTTCAGCGATGTGAAGCCGCTCTTGACATTGCGGTTTGGAA
AAGAAACCAAAGCCTTGGATTTGGCTATTAGATCCGGATCATATATGTGC
AGTGGAGATGATATTCGAAAATGGAGATTTGCGCAAAGAGAGTTGTTTCA
GGCGAAGTACGAGGAGAGAGAGGTGCAGGAAGAGTTGGTGCCTTACCCTC
TAGACTCAAAAGATAAGGAGCTGCTGGAGGCCATTCAAACGGACAGCCTG
GGAGCGTTCCGTGAGGCCTGGAATGGCCTAACCCCGATGGAAATGGAGAT
CCACTGGGGGCGATTGTCGCTGTGGCTATTACGGAATTCTCCTGAGCTGG
CCTTGGAATTCCTCCTAGTCACTTGTCAGGCTTCTGTTAAACCAGTATTT
GCCATGATTGCGGACTGCCTGATCTATTTGGACACTCTTCATTCTGGTGA
GATGCAGCGGTGGAGGAAAAATTCCCACAACTATCAGTCTGTCATACGTA
TCTGCTTGGATCCCATGCAGTGGCCTGTCTCCTATGTGCCGCAGAAGGGT
GTGCGCTTCTACATAAAGAAGGCTGACCGTAGCGCAGTTTATGAGGCATG
GAATCTTGTGGAGACTCGAAAGCACAGATTGAAGGGCGAGACCTACCTTG
GTTTCATGGGCCGCTTCACGGAATTCAAAGACGTTGACAACGCACTCCTG
GCACTGCGCCGGGCTGGGCGGCAGTTTTGGAGATTACATCAAAGTCCTAT
GGAGATAGCAGTTTCACGCCATTGCAGCAAGCTCTTGGTTCTCGACTCGG
TTGTGGATGGCCCGGATGGACGCAATTTCCGCATTCTTCCCGAACTCCTC
AGTATGGGGGTGCAGCCTGACCGAGACATGATGAACGTGGTGCTCTCTAA
CGCCTTCAAGACAGGGGATCCTCAACTCGGGCTTGATGTATTGCGCCATA
TGAAGGCTCAAGGCTTCCAGCTCGATTCGTACACTTATCTGACTCTACTT
AGCGATGCTGTCGCTCGTCAAGACAGGGAGCGAATGACACACTTGATGGA
GGAACTTGAAAGCCAGCCAGAGCTCAAGAAGAACCCCTATATTGCGAGCA
AGCTCTTCCACTCTCACTTCGTTTTCAACGTCAAGCATCTCGATGGTGCT
ACAGACCGCCGGGAGATTTTCTACTCACTGCTGCGCATGTATTGTGAGCT
GCATGACATAACGCCCCTAAAAGAGCTCTCGATTGTCCCTCGTCAGTACG
ATCTTCCAACAACTGGCGAAAAGACCCCACCGTCCGTCATTGCCTTGTAT
CTCGTGATTGCGACTTGGCTCCGGTGTCAAGCTCACGTGGGCAGCGTCGA
ACGTGTTTATACCAGGTTCCGGGAATTGGTGTTGCAAGGCCACAAAGACG
TAGCCCCTCTAGCTGCGACCGACCATACCTACAATGAGTTCATGCTTGCG
TATCGTAACAATCCACACGGGTTACGGCCCGCTGTGCGCGTTGTTGAAGA
CATGTTACAGTCTGCCACTGAGGTTGGCGCCAAAACTGGCAATTCTGAGT
CAACTTTCACGCAGACACAGCCAACGGTCTTGACTTGGACGCTGCTGTTG
AGTGCTTTCATCTATAACAACCAGCCACTCGCGGCTGAGAAGGTGAGAGA
GATGATGGCTAAGCATGGTGTTGTATACAGCATGACTACTTGGAATGTCA
TCATCAGCGGGTTTGCGAGCCAGCAAAATGCATCTGCCATCGCGCAGTCC
ATCAAAGATCTCGAAGATCAAGGCCTTTCCATTGATGCTTATACGATGAA
GGGCCTGCGCTACCTCCGAGACCCGGAGCAGCTCTGGATTGCGGTGGAGC
AGTTGGACCTGAAATCTGCATCTCACTTGAGGAGGGATGCTTTCAACCCG
AACCCCGAATCTCCCCACCTGGACGAAGCGGAAACTGAGCAGCTGCTCGA
TCGAGGCCTGCAGCGTCTAAAGGCCAACGCATGAATGCCCCAGCGCCTCT
TCCATACAACTACCTTTGGCCGATCTGCAGGGAATCGTGTATTTCACAAT
CAGCCCTCGATTACCAAAAGGGAGTTCTCACTTCTGTCACCCGGAGCCGG
TTCTCGCAATGCAACTTTACTATCGATCATCAACAAACACACCACACTTT
CCGTCGTGCAGAAACGCAATTTGCGCACCCCACCTACCCTCGCGAGCTTC
AGCGATGTGAAGCCGCTCTTGACATTGCGGTTTGGAAAAGAAACCAAAGC
CTTGGATTTGGCTATTAGATCCGGATCATATATGTGCAGTGGAGATGATA
TTCGAAAATGGAGATTTGCGCAAAGAGAGTTGTTTCAGGCGAAGTACGAG
GAGAGAGAGGTGCAGGAAGAGTTGGTGCCTTACCCTCTAGACTCAAAAGA
TAAGGAGCTGCTGGAGGCCATTCAAACGGACAGCCTGGGAGCGTTCCGTG
AGGCCTGGAATGGCCTAACCCCGATGGAAATGGAGATCCACTGGGGGCGA
TTGTCGCTGTGGCTATTACGGAATTCTCCTGAGCTGGCCTTGGAATTCCT
CCTAGTCACTTGTCAGGCTTCTGTTAAACCAGTATTTGCCATGATTGCGG
ACTGCCTGATCTATTTGGACACTCTTCATTCTGGTGAGATGCAGCGGTGG
AGGAAAAATTCCCACAACTATCAGTCTGTCATACGTATCTGCTTGGATCC
CATGCAGTGGCCTGTCTCCTATGTGCCGCAGAAGGGTGTGCGCTTCTACA
TAAAGAAGGCTGACCGTAGCGCAGTTTATGAGGCATGGAATCTTGTGGAG
ACTCGAAAGCACAGATTGAAGGGCGAGACCTACCTTGGTTTCATGGGCCG
CTTCACGGAATTCAAAGACGTTGACAACGCACTCCTGGCACTGCGCCGGG
CTGGGCGGCAGTTTTGGAGATTACATCAAAGTCCTATGGAGATAGCAGTT
TCACGCCATTGCAGCAAGCTCTTGGTTCTCGACTCGGTTGTGGATGGCCC
GGATGGACGCAATTTCCGCATTCTTCCCGAACTCCTCAGTATGGGGGTGC
AGCCTGACCGAGACATGATGAACGTGGTGCTCTCTAACGCCTTCAAGACA
GGGGATCCTCAACTCGGGCTTGATGTATTGCGCCATATGAAGGCTCAAGG
CTTCCAGCTCGATTCGTACACTTATCTGACTCTACTTAGCGATGCTGTCG
CTCGTCAAGACAGGGAGCGAATGACACACTTGATGGAGGAACTTGAAAGC
CAGCCAGAGCTCAAGAAGAACCCCTATATTGCGAGCAAGCTCTTCCACTC
TCACTTCGTTTTCAACGTCAAGCATCTCGATGGTGCTACAGACCGCCGGG
AGATTTTCTACTCACTGCTGCGCATGTATTGTGAGCTGCATGACATAACG
CCCCTAAAAGAGCTCTCGATTGTCCCTCGTCAGTACGATCTTCCAACAAC
TGGCGAAAAGACCCCACCGTCCGTCATTGCCTTGTATCTCGTGATTGCGA
CTTGGCTCCGGTGTCAAGCTCACGTGGGCAGCGTCGAACGTGTTTATACC
AGGTTCCGGGAATTGGTGTTGCAAGGCCACAAAGACGTAGCCCCTCTAGC
TGCGACCGACCATACCTACAATGAGTTCATGCTTGCGTATCGTAACAATC
CACACGGGTTACGGCCCGCTGTGCGCGTTGTTGAAGACATGTTACAGTCT
GCCACTGAGGTTGGCGCCAAAACTGGCAATTCTGAGTCAACTTTCACGCA
GACACAGCCAACGGTCTTGACTTGGACGCTGCTGTTGAGTGCTTTCATCT
ATAACAACCAGCCACTCGCGGCTGAGAAGGTGAGAGAGATGATGGCTAAG
CATGGTGTTGTATACAGCATGACTACTTGGAATGTCATCATCAGCGGGTT
TGCGAGCCAGCAAAATGCATCTGCCATCGCGCAGTCCATCAAAGATCTCG
AAGATCAAGGCCTTTCCATTGATGCTTATACGATGAAGGGCCTGCGCTAC
CTCCGAGACCCGGAGCAGCTCTGGATTGCGGTGGAGCAGTTGGACCTGAA
ATCTGCATCTCACTTGAGGAGGGATGCTTTCAACCCGAACCCCGAATCTC
CCCACCTGGACGAAGCGGAAACTGAGCAGCTGCTCGATCGAGGCCTGCAG
CGTCTAAAGGCCAACGCATGAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011860-T1.utr5p1 | KJC3_011860-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR002885 |
| DBxref | PFAM:PF13812 |
| DBxref | PFAM:PF01535 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1869562..1872026 - |
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