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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1888685..1890063- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011870-T1 ID=KJC3_011870-T1|Name=KJC3_011870-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1379bp|location=Sequence derived from alignment at ch8:1888685..1890063- (Aspergillus niger KJC3)
CTCCTTCCTCTCCCACTGACTCCCCACCCCCCGCCGCCAAAATGTCCTCC
CAAGCCCCTCACCCCACCCTGTTGATTCCAGGGCCCATTGAATTCGACGA
TGCTGTCCTCCAGTCTATGGCTCACTACGCGTAAGTAAATACCCCTCGTC
CTCGTCCCCGTCCTCGTCCTTTTTCCTCCGATCAGCCCCTCATTGACCAA
TTTCTTGGCTTCCAGTGAGAGCCATGTCGCCCCCGGTTTCGTCAAGACCT
TCGGAGAGACCCTGTCCATGGTCCGGAAACTCTTCCAGTCCTCCAACCCT
GCTGCTCAGCCCTTCGTTATCTCCGGTAGCGGTACTCTCGGATGGGATAT
CGTGGCCTCCAACCTGATTGAGAAGGGTGAGAATGCGCTGGTCCTGCACA
CCGGTTACTTTGCCGACTCCTTCGCTACCTGCCTGGAAACCTACGGCGCC
AATGCCACCCAGCTCAAGGCCCCCATCGGTGAACGCCCCTCTTTCGAGGA
AATCGAGCAGGCCCTCAAGGAGAAGCCCTACAAGATCATTACCATCACCC
ACGTCGACACCTCGACCGGTGTCCTCAGCGACATCAAGCGCGTGGCCGAG
GTCGTCCGTCGCGTCAGCCCCCAGACCCTGGTCGTCGTCGACGGTGTCTG
CAGTGTCGGCTGTGAAGAGATTGCCTTCGACGAATGGGACATTGATGTCG
TCCTCACGGCCAGCCAGAAGGCCATCGGCTGCCCGCCCGGCCTCAGCATC
CTGATGCTGTCCGGCCGCGCCATCAACACCTTCAAGACCCGCCAGACCCC
CCCGTCCTCCTACTACGCCTCCATCGCCAACTGGCTCCCTATCATGCAGA
ACTACGAGAACTTCAAGCCCTCTTACTTCGCCACCCCTCCCACCCAGCTC
GTCCATGCTCTGCACACCACTCTTTCCCAGATCACTGCCCGTCCCATGTC
GGAGCGCTACGCCATCCACGCCCAGGCCTCCGACCGCGTCAAGGCTGCTG
TCGCTGATCTCGGTCTGCAGCAGGTCGCTTCCAAGCCCGAGAACCAGGCC
CACGCCATGACGGCCATCTGGCTGCCGGAGGGTCTGGCTCCTCCGGATGT
CCTGCCGGGTCTGCTGAAGCGCGGCGTCATCTTTGCAGCGGGTCTGCACA
AGCAGGTTGCCACCAAGTACATCCGCTTCGGACACATGGGCGTCAGCGTC
ACGGATCCCAACCGTTCGGACGTCGACAAGGCCATTGCTGCCTTGAAGGA
AGCCTTGACGGAGGCGAAGCAGGCCAAGGGACTGTAAAGGGGCTACGAAA
ATCAATTAGTACCATAACGATCTCATAGACGAACAATTGCAAATAACAAA
AAAAAATAGCGAAATGAAATAAAAATTGG back to topCoding sequence (CDS) from alignment at ch8:1888685..1890063- >KJC3_011870-T1 ID=KJC3_011870-T1|Name=KJC3_011870-T1|organism=Aspergillus niger KJC3|type=CDS|length=2322bp|location=Sequence derived from alignment at ch8:1888685..1890063- (Aspergillus niger KJC3)
TGAGAGCCATGTCGCCCCCGGTTTCGTCAAGACCTTCGGAGAGACCCTGT
CCATGGTCCGGAAACTCTTCCAGTCCTCCAACCCTGCTGCTCAGCCCTTC
GTTATCTCCGGTAGCGGTACTCTCGGATGGGATATCGTGGCCTCCAACCT
GATTGAGAAGGGTGAGAATGCGCTGGTCCTGCACACCGGTTACTTTGCCG
ACTCCTTCGCTACCTGCCTGGAAACCTACGGCGCCAATGCCACCCAGCTC
AAGGCCCCCATCGGTGAACGCCCCTCTTTCGAGGAAATCGAGCAGGCCCT
CAAGGAGAAGCCCTACAAGATCATTACCATCACCCACGTCGACACCTCGA
CCGGTGTCCTCAGCGACATCAAGCGCGTGGCCGAGGTCGTCCGTCGCGTC
AGCCCCCAGACCCTGGTCGTCGTCGACGGTGTCTGCAGTGTCGGCTGTGA
AGAGATTGCCTTCGACGAATGGGACATTGATGTCGTCCTCACGGCCAGCC
AGAAGGCCATCGGCTGCCCGCCCGGCCTCAGCATCCTGATGCTGTCCGGC
CGCGCCATCAACACCTTCAAGACCCGCCAGACCCCCCCGTCCTCCTACTA
CGCCTCCATCGCCAACTGGCTCCCTATCATGCAGAACTACGAGAACTTCA
AGCCCTCTTACTTCGCCACCCCTCCCACCCAGCTCGTCCATGCTCTGCAC
ACCACTCTTTCCCAGATCACTGCCCGTCCCATGTCGGAGCGCTACGCCAT
CCACGCCCAGGCCTCCGACCGCGTCAAGGCTGCTGTCGCTGATCTCGGTC
TGCAGCAGGTCGCTTCCAAGCCCGAGAACCAGGCCCACGCCATGACGGCC
ATCTGGCTGCCGGAGGGTCTGGCTCCTCCGGATGTCCTGCCGGGTCTGCT
GAAGCGCGGCGTCATCTTTGCAGCGGGTCTGCACAAGCAGGTTGCCACCA
AGTACATCCGCTTCGGACACATGGGCGTCAGCGTCACGGATCCCAACCGT
TCGGACGTCGACAAGGCCATTGCTGCCTTGAAGGAAGCCTTGACGGAGGC
GAAGCAGGCCAAGGGACTGTAAATGTCCTCCCAAGCCCCTCACCCCACCC
TGTTGATTCCAGGGCCCATTGAATTCGACGATGCTGTCCTCCAGTCTATG
GCTCACTACGCTGAGAGCCATGTCGCCCCCGGTTTCGTCAAGACCTTCGG
AGAGACCCTGTCCATGGTCCGGAAACTCTTCCAGTCCTCCAACCCTGCTG
CTCAGCCCTTCGTTATCTCCGGTAGCGGTACTCTCGGATGGGATATCGTG
GCCTCCAACCTGATTGAGAAGGGTGAGAATGCGCTGGTCCTGCACACCGG
TTACTTTGCCGACTCCTTCGCTACCTGCCTGGAAACCTACGGCGCCAATG
CCACCCAGCTCAAGGCCCCCATCGGTGAACGCCCCTCTTTCGAGGAAATC
GAGCAGGCCCTCAAGGAGAAGCCCTACAAGATCATTACCATCACCCACGT
CGACACCTCGACCGGTGTCCTCAGCGACATCAAGCGCGTGGCCGAGGTCG
TCCGTCGCGTCAGCCCCCAGACCCTGGTCGTCGTCGACGGTGTCTGCAGT
GTCGGCTGTGAAGAGATTGCCTTCGACGAATGGGACATTGATGTCGTCCT
CACGGCCAGCCAGAAGGCCATCGGCTGCCCGCCCGGCCTCAGCATCCTGA
TGCTGTCCGGCCGCGCCATCAACACCTTCAAGACCCGCCAGACCCCCCCG
TCCTCCTACTACGCCTCCATCGCCAACTGGCTCCCTATCATGCAGAACTA
CGAGAACTTCAAGCCCTCTTACTTCGCCACCCCTCCCACCCAGCTCGTCC
ATGCTCTGCACACCACTCTTTCCCAGATCACTGCCCGTCCCATGTCGGAG
CGCTACGCCATCCACGCCCAGGCCTCCGACCGCGTCAAGGCTGCTGTCGC
TGATCTCGGTCTGCAGCAGGTCGCTTCCAAGCCCGAGAACCAGGCCCACG
CCATGACGGCCATCTGGCTGCCGGAGGGTCTGGCTCCTCCGGATGTCCTG
CCGGGTCTGCTGAAGCGCGGCGTCATCTTTGCAGCGGGTCTGCACAAGCA
GGTTGCCACCAAGTACATCCGCTTCGGACACATGGGCGTCAGCGTCACGG
ATCCCAACCGTTCGGACGTCGACAAGGCCATTGCTGCCTTGAAGGAAGCC
TTGACGGAGGCGAAGCAGGCCAAGGGACTGTAAATGTCCTCCCAAGCCCC
TCACCCCACCCTGTTGATTCCAGGGCCCATTGAATTCGACGATGCTGTCC
TCCAGTCTATGGCTCACTACGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011870-T1.utr3p1 | KJC3_011870-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011870-T1.utr5p1 | KJC3_011870-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR020578 |
| DBxref | InterPro:IPR015422 |
| DBxref | InterPro:IPR000192 |
| DBxref | InterPro:IPR024169 |
| DBxref | InterPro:IPR015421 |
| DBxref | PFAM:PF00266 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1888685..1890063 - |
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