|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1989927..1991402- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011908-T1 ID=KJC3_011908-T1|Name=KJC3_011908-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1476bp|location=Sequence derived from alignment at ch8:1989927..1991402- (Aspergillus niger KJC3)
ATGATGTCACAGTCGAATTATATGTCCAATCAGTTCGGCAACCCCAACGA
AGGGGTTGACCCGTCGGAGCTTAGTATGCAGAACGGTGGATTTATGTCCT
ACCCATTCACATCGCAGCAGAACTTCAACTTTGGAAACTCAGGTATCGAT
ACAGATGAGTTGCTGGACCTGGAGATTAACGGACAGAATGGTATGCAACA
GAACTTCCTTCAGGACCAGCATTCAGGTGCCGGGATCTCTATGAGTCATC
CGGGACAGATGTCTCAGATGTACTCGAACACGCCCGATGGAGCTCCCATG
AACAGCCCGTTCATGCACAGCTTCAATTATGATCACTTCCGAACCATGAA
CCAAAACGGCCAACCTGGCTCTCATCTGCAGGGTGGATCCCAGTTCGAAC
AGAGCTATTTGGCTTCCAAAGGCCGCCCAAGTTTGCAGGCTGTGGACCGC
GCTTCGCTTGATGCGCGCAGCCCGATGACTCCGAAGACCCCAGCCCTTGG
TGCTTTGACCCTGGGAACCCCAGAATCTGGAAGCTTTCCTACGCAACCCA
TCCGGACTGGCCTTCAGCATCGCCACCAAAAGACACTGTCCAACCAATGG
GACGGTACGCCAGGAAGTGCGCATTCTTTCGTGGAGTCCCCTATTTCCTC
TCCTGGCCACCCTCACCACGCGGGAATCTCGGAGATCCTCAAGTCTGGTA
AACATGCTTCCTTGCCGGCCAAGGTTGATGCGCATATGCCCGGCAGTGCC
CAGGACTTAGAATCCCAAGAGGCCAAGCGACGCCGTCGGCGGGCCTCCCA
TAACCTGGTCGAGCGCCGGCGACGGGACAACATCAACGAGCGCATCCAGG
ATCTTTCCCACCTCGTTCCTCAGCATCGGTTGGAGGATGACAAAGTCCGG
AAACAGCTTGTCAATAACACAGCAATGTCTGCCACTGGAGCCACCCCCAA
TGCCGCAACGTCTTTGCTGGCTGGAGGCAATGGCCGCCGGGCCACTGCGG
GTAACATCACGATGGGTCTGCCGATTGAGGAGAAGGAGAAGGGCCCGAAC
AAGGGCGACATCCTGAACGGTGCCGTCGGCTGGATGCGTGACCTCATGTG
GGCCCTACATGTTAAGCTCCAGCAGGAATCAGAGCTAGCTGAAATTATCA
GCAACTTGGGTGGAACTTGGCCATTTGAGCAAACTGAGGAGGAGAAGCGG
ATGAGAACGGAGATTCTCGATGCTTTGGAGAAGAACGACCCTAGTTCGTT
CACTTATAGCAGGGCACCCGGGAGCGGGCTGCGAGTACCGAAACATACAA
ACATGGCAGGGGACTCTGTGGCCGGCAATGGGGCTTTGAGCCCCCAGAGC
CTGAGCCCCCCGTTCAACGGCGGCGGTAGCAACGGAGGCTCCGGGCAGGC
TCAGTACTGGAGCAGCTCGGGCCACGCGGGCATGAGCTTCAAGGAGGAAG
ACGAGTATGCGATGGAGATGAATTAG back to topCoding sequence (CDS) from alignment at ch8:1989927..1991402- >KJC3_011908-T1 ID=KJC3_011908-T1|Name=KJC3_011908-T1|organism=Aspergillus niger KJC3|type=CDS|length=1476bp|location=Sequence derived from alignment at ch8:1989927..1991402- (Aspergillus niger KJC3)
ATGATGTCACAGTCGAATTATATGTCCAATCAGTTCGGCAACCCCAACGA
AGGGGTTGACCCGTCGGAGCTTAGTATGCAGAACGGTGGATTTATGTCCT
ACCCATTCACATCGCAGCAGAACTTCAACTTTGGAAACTCAGGTATCGAT
ACAGATGAGTTGCTGGACCTGGAGATTAACGGACAGAATGGTATGCAACA
GAACTTCCTTCAGGACCAGCATTCAGGTGCCGGGATCTCTATGAGTCATC
CGGGACAGATGTCTCAGATGTACTCGAACACGCCCGATGGAGCTCCCATG
AACAGCCCGTTCATGCACAGCTTCAATTATGATCACTTCCGAACCATGAA
CCAAAACGGCCAACCTGGCTCTCATCTGCAGGGTGGATCCCAGTTCGAAC
AGAGCTATTTGGCTTCCAAAGGCCGCCCAAGTTTGCAGGCTGTGGACCGC
GCTTCGCTTGATGCGCGCAGCCCGATGACTCCGAAGACCCCAGCCCTTGG
TGCTTTGACCCTGGGAACCCCAGAATCTGGAAGCTTTCCTACGCAACCCA
TCCGGACTGGCCTTCAGCATCGCCACCAAAAGACACTGTCCAACCAATGG
GACGGTACGCCAGGAAGTGCGCATTCTTTCGTGGAGTCCCCTATTTCCTC
TCCTGGCCACCCTCACCACGCGGGAATCTCGGAGATCCTCAAGTCTGGTA
AACATGCTTCCTTGCCGGCCAAGGTTGATGCGCATATGCCCGGCAGTGCC
CAGGACTTAGAATCCCAAGAGGCCAAGCGACGCCGTCGGCGGGCCTCCCA
TAACCTGGTCGAGCGCCGGCGACGGGACAACATCAACGAGCGCATCCAGG
ATCTTTCCCACCTCGTTCCTCAGCATCGGTTGGAGGATGACAAAGTCCGG
AAACAGCTTGTCAATAACACAGCAATGTCTGCCACTGGAGCCACCCCCAA
TGCCGCAACGTCTTTGCTGGCTGGAGGCAATGGCCGCCGGGCCACTGCGG
GTAACATCACGATGGGTCTGCCGATTGAGGAGAAGGAGAAGGGCCCGAAC
AAGGGCGACATCCTGAACGGTGCCGTCGGCTGGATGCGTGACCTCATGTG
GGCCCTACATGTTAAGCTCCAGCAGGAATCAGAGCTAGCTGAAATTATCA
GCAACTTGGGTGGAACTTGGCCATTTGAGCAAACTGAGGAGGAGAAGCGG
ATGAGAACGGAGATTCTCGATGCTTTGGAGAAGAACGACCCTAGTTCGTT
CACTTATAGCAGGGCACCCGGGAGCGGGCTGCGAGTACCGAAACATACAA
ACATGGCAGGGGACTCTGTGGCCGGCAATGGGGCTTTGAGCCCCCAGAGC
CTGAGCCCCCCGTTCAACGGCGGCGGTAGCAACGGAGGCTCCGGGCAGGC
TCAGTACTGGAGCAGCTCGGGCCACGCGGGCATGAGCTTCAAGGAGGAAG
ACGAGTATGCGATGGAGATGAATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036638 |
| DBxref | InterPro:IPR011598 |
| DBxref | PFAM:PF00010 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1989927..1991402 - |
|
